RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 AP3S1Q92572 193 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 TAMM41Q96BW9 452 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 PIK3IP1Q96FE7 263 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 ADTRPQ96IZ2 230 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 OPALINQ96PE5 141 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 KCNA7Q96RP8 456 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 KRTAP2-2Q9BYT5 123 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 TMEM100Q9NV29 134 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 CMTM6Q9NX76 183 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 SLC25A37Q9NYZ2 338 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 SIGLEC8Q9NYZ4 499 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 MLXQ9UH92 298 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 SLC22A13Q9Y226 551 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 VSIG4Q9Y279 399 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 MDC1Q14676 2089 aaKnown RBP1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 ABCA7Q8IZY2 2146 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 APC2O95996 2303 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 MEIKINA0A087WXM9 373 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 IGHV3-38A0A0C4DH36 116 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 LOC100131303A0A0U1RQF7 123 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 EIF3GO75821 320 aaKnown RBP eCLIP1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 NXPH4O95158 308 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 LYPD3O95274 346 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 CT45A10P0DMU9 189 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 PVALBP20472 110 aaPredicted RBP1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 GGT2P36268 569 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 RBMXP38159 391 aaKnown RBP1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 KIR3DL2P43630 455 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 NPBWR2P48146 333 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 PSMB2P49721 201 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 GNG3P63215 75 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 LRRC10Q5BKY1 277 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 CLVS2Q5SYC1 327 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 SAMD13Q5VXD3 122 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 TEX36Q5VZQ5 186 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 KDM4DQ6B0I6 523 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 ZCCHC23Q6ZST2 131 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 CLECL1Q8IZS7 167 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 C8orf59Q8N0T1 100 aaPredicted RBP1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 ABHD12Q8N2K0 398 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 KIF2BQ8N4N8 673 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF561Q8N587 486 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 CNEP1R1Q8N9A8 125 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 CCDC71LQ8N9Z2 235 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 GATSQ8NAP1 163 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 SLC30A7Q8NEW0 376 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 OR8B3Q8NGG8 313 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF418Q8TF45 676 aaPredicted RBP1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 OR8B2Q96RD0 313 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 PRSS27Q9BQR3 290 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 SULT4A1Q9BR01 284 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 MND1Q9BWT6 205 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 PLA2G12AQ9BZM1 189 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 OR2H1Q9GZK4 316 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 OR52D1Q9H346 318 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 MMP26Q9NRE1 261 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 R4GMQ9 66 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 CABIN1Q9Y6J0 2220 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 ZFHX3Q15911 3703 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 ITPR3Q14573 2671 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 SHISA9B4DS77 424 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 EEF1E1-BLOC1S5C9J1V9 151 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 SULT1C2O00338 296 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 NME4O00746 187 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 HSD17B6O14756 317 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 MYL12BO14950 172 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 SIVA1O15304 175 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 EEF1E1O43324 174 aaKnown RBP1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 VENTXO95231 258 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 RAB3DO95716 219 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 LY6G6DO95868 133 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 NRASP01111 189 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 IGKV1D-16P01601 117 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 HBE1P02100 147 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 CSN2P05814 226 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 CD5P06127 495 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF35P13682 527 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF14P17017 642 aaPredicted RBP1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 SHC1P29353 583 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 PPP3R1P63098 170 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 RPL18Q07020 188 aaKnown RBP1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 FUT5Q11128 374 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 KCTD19Q17RG1 926 aaPredicted RBP1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF684Q5T5D7 378 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 ELP2Q6IA86 826 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 LPCAT3Q6P1A2 487 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 STAC2Q6ZMT1 411 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 FAM122BQ7Z309 247 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 LHFPL3Q86UP9 236 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 CDC20BQ86Y33 519 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 MSRB3Q8IXL7 192 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 OR5D14Q8NGL3 314 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 OTOSQ8NHW6 89 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 C11orf45Q8TAV5 145 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 MRAPQ8TCY5 172 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 ASB13Q8WXK3 278 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 CYYR1Q96J86 154 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 FAM218AQ96MZ4 157 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 S100A13Q99584 98 aa1.5□□□□□ -2.17
SMCHD1-211ENST00000584897 CHID1Q9BWS9 393 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms