RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 B9D2Q9BPU9 175 aa16.25■□□□□ 0.19
SRSF1-206ENST00000583741 COPZ2Q9P299 210 aa16.25■□□□□ 0.19
SRSF1-206ENST00000583741 IGKV1-6A0A0C4DH72 117 aa16.24■□□□□ 0.19
SRSF1-206ENST00000583741 SPINT2O43291 252 aa16.24■□□□□ 0.19
SRSF1-206ENST00000583741 HBZP02008 142 aa16.24■□□□□ 0.19
SRSF1-206ENST00000583741 ETV3LQ6ZN32 361 aa16.24■□□□□ 0.19
SRSF1-206ENST00000583741 DUSP18Q8NEJ0 188 aa16.24■□□□□ 0.19
SRSF1-206ENST00000583741 OR1L1Q8NH94 360 aa16.24■□□□□ 0.19
SRSF1-206ENST00000583741 CORO2AQ92828 525 aa16.24■□□□□ 0.19
SRSF1-206ENST00000583741 GALMQ96C23 342 aa16.24■□□□□ 0.19
SRSF1-206ENST00000583741 AKR1E2Q96JD6 320 aa16.24■□□□□ 0.19
SRSF1-206ENST00000583741 SLC25A33Q9BSK2 321 aa16.24■□□□□ 0.19
SRSF1-206ENST00000583741 RAB9BQ9NP90 201 aa16.24■□□□□ 0.19
SRSF1-206ENST00000583741 UBE2J1Q9Y385 318 aaPredicted RBP16.24■□□□□ 0.19
SRSF1-206ENST00000583741 STAB2Q8WWQ8 2551 aa16.23■□□□□ 0.19
SRSF1-206ENST00000583741 C15orf65H3BRN8 121 aa16.23■□□□□ 0.19
SRSF1-206ENST00000583741 DIRAS3O95661 229 aa16.23■□□□□ 0.19
SRSF1-206ENST00000583741 RBMS2Q15434 407 aaKnown RBP16.23■□□□□ 0.19
SRSF1-206ENST00000583741 OR6F1Q8NGZ6 308 aa16.23■□□□□ 0.19
SRSF1-206ENST00000583741 OR10J5Q8NHC4 309 aa16.23■□□□□ 0.19
SRSF1-206ENST00000583741 GINS4Q9BRT9 223 aa16.23■□□□□ 0.19
SRSF1-206ENST00000583741 CALYQ9NYX4 217 aa16.23■□□□□ 0.19
SRSF1-206ENST00000583741 TRBV6-7A0A0A0MS04 114 aa16.22■□□□□ 0.19
SRSF1-206ENST00000583741 ZNF729A6NN14 1252 aaPredicted RBP16.22■□□□□ 0.19
SRSF1-206ENST00000583741 TCRBP04435 133 aa16.22■□□□□ 0.19
SRSF1-206ENST00000583741 CGB3P0DN86 165 aa16.22■□□□□ 0.19
SRSF1-206ENST00000583741 CGB7P0DN87 165 aa16.22■□□□□ 0.19
SRSF1-206ENST00000583741 FCGR2CP31995 323 aa16.22■□□□□ 0.19
SRSF1-206ENST00000583741 PRAMEF5Q5TYX0 476 aa16.22■□□□□ 0.19
SRSF1-206ENST00000583741 PLET1Q6UQ28 207 aa16.22■□□□□ 0.19
SRSF1-206ENST00000583741 MRPL41Q8IXM3 137 aaKnown RBP16.22■□□□□ 0.19
SRSF1-206ENST00000583741 RBM14Q96PK6 669 aaKnown RBP16.22■□□□□ 0.19
SRSF1-206ENST00000583741 ZNF2Q9BSG1 426 aaPredicted RBP16.22■□□□□ 0.19
SRSF1-206ENST00000583741 GAL3ST2Q9H3Q3 398 aa16.22■□□□□ 0.19
SRSF1-206ENST00000583741 TAS2R3Q9NYW6 316 aa16.22■□□□□ 0.19
SRSF1-206ENST00000583741 DPM3Q9P2X0 92 aa16.22■□□□□ 0.19
SRSF1-206ENST00000583741 SLC23A1Q9UHI7 598 aa16.22■□□□□ 0.19
SRSF1-206ENST00000583741 KBTBD11-OT1A0A1B0GTJ5 212 aa16.22■□□□□ 0.19
SRSF1-206ENST00000583741 FAM172BPA6NC97 362 aa16.22■□□□□ 0.19
SRSF1-206ENST00000583741 NPIPB11E5RHQ5 1161 aa16.22■□□□□ 0.19
SRSF1-206ENST00000583741 HSPA12AO43301 675 aa16.22■□□□□ 0.19
SRSF1-206ENST00000583741 OR2F2O95006 317 aa16.22■□□□□ 0.19
SRSF1-206ENST00000583741 NDUFB6O95139 128 aa16.22■□□□□ 0.19
SRSF1-206ENST00000583741 C17orf58Q2M2W7 97 aa16.22■□□□□ 0.19
SRSF1-206ENST00000583741 ZNF660Q6AZW8 331 aaPredicted RBP16.22■□□□□ 0.19
SRSF1-206ENST00000583741 DHRS11Q6UWP2 260 aa16.22■□□□□ 0.19
SRSF1-206ENST00000583741 LHFPL1Q86WI0 220 aa16.22■□□□□ 0.19
SRSF1-206ENST00000583741 ABHD12Q8N2K0 398 aa16.22■□□□□ 0.19
SRSF1-206ENST00000583741 TERB2Q8NHR7 220 aa16.22■□□□□ 0.19
SRSF1-206ENST00000583741 RFESDQ8TAC1 157 aa16.22■□□□□ 0.19
SRSF1-206ENST00000583741 CAPSLQ8WWF8 208 aa16.22■□□□□ 0.19
SRSF1-206ENST00000583741 OR1A1Q9P1Q5 309 aa16.22■□□□□ 0.19
SRSF1-206ENST00000583741 NUBP2Q9Y5Y2 271 aa16.22■□□□□ 0.19
SRSF1-206ENST00000583741 IGLV1-47P01700 117 aa16.21■□□□□ 0.19
SRSF1-206ENST00000583741 NFYAP23511 347 aaPredicted RBP16.21■□□□□ 0.19
SRSF1-206ENST00000583741 ZBTB25P24278 435 aa16.21■□□□□ 0.19
SRSF1-206ENST00000583741 BRS3P32247 399 aa16.21■□□□□ 0.19
SRSF1-206ENST00000583741 OR13C8Q8NGS7 320 aa16.21■□□□□ 0.19
SRSF1-206ENST00000583741 GIMAP1Q8WWP7 306 aa16.21■□□□□ 0.19
SRSF1-206ENST00000583741 SLC25A21Q9BQT8 299 aaPredicted RBP16.21■□□□□ 0.19
SRSF1-206ENST00000583741 C20orf85Q9H1P6 137 aa16.21■□□□□ 0.19
SRSF1-206ENST00000583741 NUDT15Q9NV35 164 aa16.21■□□□□ 0.19
SRSF1-206ENST00000583741 HTD2P86397 168 aa16.2■□□□□ 0.18
SRSF1-206ENST00000583741 AADACL3Q5VUY0 350 aa16.2■□□□□ 0.18
SRSF1-206ENST00000583741 H1FOOQ8IZA3 346 aaPredicted RBP16.2■□□□□ 0.18
SRSF1-206ENST00000583741 DPF1Q92782 380 aa16.2■□□□□ 0.18
SRSF1-206ENST00000583741 CREB3L1Q96BA8 519 aa16.2■□□□□ 0.18
SRSF1-206ENST00000583741 OR2S2Q9NQN1 319 aa16.2■□□□□ 0.18
SRSF1-206ENST00000583741 TRAV6A0A075B6T7 132 aa16.19■□□□□ 0.18
SRSF1-206ENST00000583741 OR5H14A6NHG9 310 aa16.19■□□□□ 0.18
SRSF1-206ENST00000583741 PPYP01298 95 aa16.19■□□□□ 0.18
SRSF1-206ENST00000583741 HERV-K104P61576 105 aa16.19■□□□□ 0.18
SRSF1-206ENST00000583741 LTC4SQ16873 150 aa16.19■□□□□ 0.18
SRSF1-206ENST00000583741 C9orf152Q5JTZ5 239 aa16.19■□□□□ 0.18
SRSF1-206ENST00000583741 OR52L2PQ8NGH6 319 aa16.19■□□□□ 0.18
SRSF1-206ENST00000583741 MRGPRFQ96AM1 343 aa16.19■□□□□ 0.18
SRSF1-206ENST00000583741 LINC00574Q9H8X3 128 aa16.19■□□□□ 0.18
SRSF1-206ENST00000583741 IGHV3-43A0A0B4J1X8 118 aa16.18■□□□□ 0.18
SRSF1-206ENST00000583741 TUSC2O75896 110 aa16.18■□□□□ 0.18
SRSF1-206ENST00000583741 IGHV3-43DP0DP04 118 aa16.18■□□□□ 0.18
SRSF1-206ENST00000583741 AADACP22760 399 aa16.18■□□□□ 0.18
SRSF1-206ENST00000583741 CEACAM6P40199 344 aa16.18■□□□□ 0.18
SRSF1-206ENST00000583741 ECI1P42126 302 aa16.18■□□□□ 0.18
SRSF1-206ENST00000583741 GNMTQ14749 295 aa16.18■□□□□ 0.18
SRSF1-206ENST00000583741 TMEM30BQ3MIR4 351 aa16.18■□□□□ 0.18
SRSF1-206ENST00000583741 HEPN1Q6WQI6 88 aa16.18■□□□□ 0.18
SRSF1-206ENST00000583741 C18orf65Q6ZTR6 163 aa16.18■□□□□ 0.18
SRSF1-206ENST00000583741 ZNF329Q86UD4 541 aa16.18■□□□□ 0.18
SRSF1-206ENST00000583741 ZNF596Q8TC21 504 aa16.18■□□□□ 0.18
SRSF1-206ENST00000583741 MARCH1Q8TCQ1 289 aa16.18■□□□□ 0.18
SRSF1-206ENST00000583741 MOB3AQ96BX8 217 aa16.18■□□□□ 0.18
SRSF1-206ENST00000583741 MARVELD1Q9BSK0 173 aa16.18■□□□□ 0.18
SRSF1-206ENST00000583741 GPR61Q9BZJ8 451 aa16.18■□□□□ 0.18
SRSF1-206ENST00000583741 FXYD6Q9H0Q3 95 aa16.18■□□□□ 0.18
SRSF1-206ENST00000583741 RDH8Q9NYR8 311 aa16.18■□□□□ 0.18
SRSF1-206ENST00000583741 IDI2-AS1Q9NZ38 188 aa16.18■□□□□ 0.18
SRSF1-206ENST00000583741 JPT1Q9UK76 154 aa16.18■□□□□ 0.18
SRSF1-206ENST00000583741 LEUTXA8MZ59 168 aa16.17■□□□□ 0.18
SRSF1-206ENST00000583741 ARPC1BO15143 372 aaKnown RBP16.17■□□□□ 0.18
SRSF1-206ENST00000583741 H2AFB2P0C5Z0 115 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms