RNA–Protein interactions for RNA: ENST00000583527.1

CRLF3-204, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 378 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-204ENST00000583527 FCN3O75636 299 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 JTBO76095 146 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 CST7O76096 145 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 ATG12O94817 140 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 CLDN14O95500 239 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 CLDN1O95832 211 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 PLAUP00749 431 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 SFTPCP11686 197 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 NFYBP25208 207 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 DUTP33316 252 aaKnown RBP4.54□□□□□ -1.68
CRLF3-204ENST00000583527 G6PCP35575 357 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 KIR2DS2P43631 304 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 LPAR6P43657 344 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 UQCRFS1P47985 274 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 PPOXP50336 477 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 RAB7AP51149 207 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 DYNLT3P51808 116 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 OR2B8PP59922 312 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 ID3Q02535 119 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 SWI5Q1ZZU3 235 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 MST1LQ2TV78 715 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 ZNF672Q499Z4 452 aaPredicted RBP4.54□□□□□ -1.68
CRLF3-204ENST00000583527 UTF1Q5T230 341 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 PXDC1Q5TGL8 231 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 EIF5AL1Q6IS14 154 aaKnown RBP4.54□□□□□ -1.68
CRLF3-204ENST00000583527 Q6ZRG5 221 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 Q6ZRM9 215 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 ODF3L1Q8IXM7 274 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 MUC15Q8N387 334 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 EIF4E3Q8N5X7 224 aaKnown RBP4.54□□□□□ -1.68
CRLF3-204ENST00000583527 TMEM252Q8N6L7 170 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 TCTEX1D1Q8N7M0 179 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 HSD17B11Q8NBQ5 300 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.54□□□□□ -1.68
CRLF3-204ENST00000583527 OR5C1Q8NGR4 320 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 OR4S2Q8NH73 311 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 LINC01560Q8TB33 94 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 CA5BP1Q8WTZ4 195 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 LINC00052Q96N35 136 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 YPEL2Q96QA6 119 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 RAB40CQ96S21 281 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 ATP5SQ99766 215 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 GINS3Q9BRX5 216 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 AGMATQ9BSE5 352 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 SLC25A31Q9H0C2 315 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 GAL3ST2Q9H3Q3 398 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 LINC00574Q9H8X3 128 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 COA4Q9NYJ1 87 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 IDI2-AS1Q9NZ38 188 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 CTSZQ9UBR2 303 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 NDRG3Q9UGV2 375 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 RPUSD1Q9UJJ7 312 aaKnown RBP4.54□□□□□ -1.68
CRLF3-204ENST00000583527 LAMP3Q9UQV4 416 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 LINC00312Q9Y6C7 94 aa4.54□□□□□ -1.68
CRLF3-204ENST00000583527 UBR5O95071 2799 aaPredicted RBP4.54□□□□□ -1.68
CRLF3-204ENST00000583527 ANKRD17O75179 2603 aaKnown RBP4.54□□□□□ -1.68
CRLF3-204ENST00000583527 ABCA12Q86UK0 2595 aa4.53□□□□□ -1.68
CRLF3-204ENST00000583527 PPIAL4EA0A075B759 164 aa4.53□□□□□ -1.68
CRLF3-204ENST00000583527 UBE2L5PA0A1B0GUS4 154 aa4.53□□□□□ -1.68
CRLF3-204ENST00000583527 PPIAL4DF5H284 164 aa4.53□□□□□ -1.68
CRLF3-204ENST00000583527 TOR1AO14656 332 aa4.53□□□□□ -1.68
CRLF3-204ENST00000583527 RBFOX2O43251 390 aaKnown RBP eCLIP4.53□□□□□ -1.68
CRLF3-204ENST00000583527 TXNL1O43396 289 aa4.53□□□□□ -1.68
CRLF3-204ENST00000583527 SYNGR2O43760 224 aa4.53□□□□□ -1.68
CRLF3-204ENST00000583527 FCGR3BO75015 233 aa4.53□□□□□ -1.68
CRLF3-204ENST00000583527 FBXO24O75426 580 aa4.53□□□□□ -1.68
CRLF3-204ENST00000583527 AVPP01185 164 aa4.53□□□□□ -1.68
CRLF3-204ENST00000583527 IGHV3-7P01780 117 aa4.53□□□□□ -1.68
CRLF3-204ENST00000583527 ARG1P05089 322 aa4.53□□□□□ -1.68
CRLF3-204ENST00000583527 PPIAL4FP0DN26 164 aa4.53□□□□□ -1.68
CRLF3-204ENST00000583527 CGB3P0DN86 165 aa4.53□□□□□ -1.68
CRLF3-204ENST00000583527 CGB7P0DN87 165 aa4.53□□□□□ -1.68
CRLF3-204ENST00000583527 CCL3L1P16619 93 aa4.53□□□□□ -1.68
CRLF3-204ENST00000583527 NDUFB7P17568 137 aa4.53□□□□□ -1.68
CRLF3-204ENST00000583527 GZMHP20718 246 aa4.53□□□□□ -1.68
CRLF3-204ENST00000583527 APOBEC3AP31941 199 aaPredicted RBP4.53□□□□□ -1.68
CRLF3-204ENST00000583527 THBS3P49746 956 aa4.53□□□□□ -1.68
CRLF3-204ENST00000583527 SULT1A2P50226 295 aa4.53□□□□□ -1.68
CRLF3-204ENST00000583527 PAX9P55771 341 aa4.53□□□□□ -1.68
CRLF3-204ENST00000583527 BRWD1-AS2P59051 145 aa4.53□□□□□ -1.68
CRLF3-204ENST00000583527 ERVK-16P61578 105 aa4.53□□□□□ -1.68
CRLF3-204ENST00000583527 RPL23AP62750 156 aaKnown RBP4.53□□□□□ -1.68
CRLF3-204ENST00000583527 RPL31P62899 125 aaKnown RBP4.53□□□□□ -1.68
CRLF3-204ENST00000583527 RUNX1Q01196 453 aa4.53□□□□□ -1.68
CRLF3-204ENST00000583527 NHLH2Q02577 135 aa4.53□□□□□ -1.68
CRLF3-204ENST00000583527 MEF2CQ06413 473 aaPredicted RBP4.53□□□□□ -1.68
CRLF3-204ENST00000583527 TNFRSF9Q07011 255 aa4.53□□□□□ -1.68
CRLF3-204ENST00000583527 MORN2Q502X0 79 aa4.53□□□□□ -1.68
CRLF3-204ENST00000583527 NCR3LG1Q68D85 454 aa4.53□□□□□ -1.68
CRLF3-204ENST00000583527 IL34Q6ZMJ4 242 aa4.53□□□□□ -1.68
CRLF3-204ENST00000583527 TMEM182Q6ZP80 229 aaPredicted RBP4.53□□□□□ -1.68
CRLF3-204ENST00000583527 HAPLN4Q86UW8 402 aa4.53□□□□□ -1.68
CRLF3-204ENST00000583527 TMEM217Q8N7C4 229 aa4.53□□□□□ -1.68
CRLF3-204ENST00000583527 RNF141Q8WVD5 230 aa4.53□□□□□ -1.68
CRLF3-204ENST00000583527 DDB2Q92466 427 aa4.53□□□□□ -1.68
CRLF3-204ENST00000583527 H1FXQ92522 213 aaKnown RBP4.53□□□□□ -1.68
CRLF3-204ENST00000583527 R3HDM4Q96D70 268 aa4.53□□□□□ -1.68
CRLF3-204ENST00000583527 SMIM8Q96KF7 97 aa4.53□□□□□ -1.68
CRLF3-204ENST00000583527 ZNF714Q96N38 554 aa4.53□□□□□ -1.68
CRLF3-204ENST00000583527 OR4C12Q96R67 309 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms