RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 LRRC34Q8IZ02 419 aa1.58□□□□□ -2.16
SMCHD1-209ENST00000583441 Q8NDZ9 215 aa1.58□□□□□ -2.16
SMCHD1-209ENST00000583441 PIGXQ8TBF5 258 aa1.58□□□□□ -2.16
SMCHD1-209ENST00000583441 ANKRD36BP1Q96IX9 119 aa1.58□□□□□ -2.16
SMCHD1-209ENST00000583441 ZNF471Q9BX82 626 aaPredicted RBP1.58□□□□□ -2.16
SMCHD1-209ENST00000583441 TMEM222Q9H0R3 208 aa1.58□□□□□ -2.16
SMCHD1-209ENST00000583441 C16orf95Q9H693 158 aa1.58□□□□□ -2.16
SMCHD1-209ENST00000583441 TMEM106BQ9NUM4 274 aa1.58□□□□□ -2.16
SMCHD1-209ENST00000583441 FGFR1OP2Q9NVK5 253 aa1.58□□□□□ -2.16
SMCHD1-209ENST00000583441 NDUFB11Q9NX14 153 aa1.58□□□□□ -2.16
SMCHD1-209ENST00000583441 KLK5Q9Y337 293 aaPredicted RBP1.58□□□□□ -2.16
SMCHD1-209ENST00000583441 NLRC5Q86WI3 1866 aa1.58□□□□□ -2.16
SMCHD1-209ENST00000583441 OR6C6A6NF89 314 aa1.57□□□□□ -2.16
SMCHD1-209ENST00000583441 OR5K4A6NMS3 321 aa1.57□□□□□ -2.16
SMCHD1-209ENST00000583441 OR11H12B2RN74 326 aa1.57□□□□□ -2.16
SMCHD1-209ENST00000583441 S1PR2O95136 353 aa1.57□□□□□ -2.16
SMCHD1-209ENST00000583441 KRT7P08729 469 aa1.57□□□□□ -2.16
SMCHD1-209ENST00000583441 UCHL1P09936 223 aa1.57□□□□□ -2.16
SMCHD1-209ENST00000583441 TAS2R30P59541 319 aa1.57□□□□□ -2.16
SMCHD1-209ENST00000583441 MAGOHP61326 146 aaKnown RBP1.57□□□□□ -2.16
SMCHD1-209ENST00000583441 GNA12Q03113 381 aa1.57□□□□□ -2.16
SMCHD1-209ENST00000583441 BATFQ16520 125 aa1.57□□□□□ -2.16
SMCHD1-209ENST00000583441 SLC51BQ86UW2 128 aa1.57□□□□□ -2.16
SMCHD1-209ENST00000583441 NAA40Q86UY6 237 aa1.57□□□□□ -2.16
SMCHD1-209ENST00000583441 C1orf174Q8IYL3 243 aa1.57□□□□□ -2.16
SMCHD1-209ENST00000583441 CNEP1R1Q8N9A8 125 aa1.57□□□□□ -2.16
SMCHD1-209ENST00000583441 OR11H2Q8NH07 326 aa1.57□□□□□ -2.16
SMCHD1-209ENST00000583441 TMA16Q96EY4 203 aaKnown RBP1.57□□□□□ -2.16
SMCHD1-209ENST00000583441 SLC35G5Q96KT7 338 aa1.57□□□□□ -2.16
SMCHD1-209ENST00000583441 Q9BRP9 147 aa1.57□□□□□ -2.16
SMCHD1-209ENST00000583441 MIEN1Q9BRT3 115 aa1.57□□□□□ -2.16
SMCHD1-209ENST00000583441 TMEM109Q9BVC6 243 aa1.57□□□□□ -2.16
SMCHD1-209ENST00000583441 CXCL16Q9H2A7 254 aa1.57□□□□□ -2.16
SMCHD1-209ENST00000583441 SAMHD1Q9Y3Z3 626 aaKnown RBP1.57□□□□□ -2.16
SMCHD1-209ENST00000583441 FAM215AQ9Y5M1 114 aa1.57□□□□□ -2.16
SMCHD1-209ENST00000583441 OTOGLQ3ZCN5 2332 aa1.56□□□□□ -2.16
SMCHD1-209ENST00000583441 FBN1P35555 2871 aaKnown RBP1.56□□□□□ -2.16
SMCHD1-209ENST00000583441 VPS37CA5D8V6 355 aaPredicted RBP1.56□□□□□ -2.16
SMCHD1-209ENST00000583441 C2orf74A8MZ97 194 aa1.56□□□□□ -2.16
SMCHD1-209ENST00000583441 LRRN3E7EW58 273 aa1.56□□□□□ -2.16
SMCHD1-209ENST00000583441 FNDC10F2Z333 226 aa1.56□□□□□ -2.16
SMCHD1-209ENST00000583441 M0QZ92 97 aa1.56□□□□□ -2.16
SMCHD1-209ENST00000583441 GNRH2O43555 120 aa1.56□□□□□ -2.16
SMCHD1-209ENST00000583441 HLA-DRAP01903 254 aa1.56□□□□□ -2.16
SMCHD1-209ENST00000583441 TYMSP04818 313 aa1.56□□□□□ -2.16
SMCHD1-209ENST00000583441 COX5BP10606 129 aa1.56□□□□□ -2.16
SMCHD1-209ENST00000583441 MYL12AP19105 171 aa1.56□□□□□ -2.16
SMCHD1-209ENST00000583441 RBM11P57052 281 aaKnown RBP1.56□□□□□ -2.16
SMCHD1-209ENST00000583441 FKBP1AP62942 108 aaKnown RBP1.56□□□□□ -2.16
SMCHD1-209ENST00000583441 MLLT11Q13015 90 aaPredicted RBP1.56□□□□□ -2.16
SMCHD1-209ENST00000583441 JOSD1Q15040 202 aaPredicted RBP1.56□□□□□ -2.16
SMCHD1-209ENST00000583441 PABPC1L2AQ5JQF8 200 aa1.56□□□□□ -2.16
SMCHD1-209ENST00000583441 FAM78BQ5VT40 261 aa1.56□□□□□ -2.16
SMCHD1-209ENST00000583441 LRRN1Q6UXK5 716 aa1.56□□□□□ -2.16
SMCHD1-209ENST00000583441 GLT6D1Q7Z4J2 308 aa1.56□□□□□ -2.16
SMCHD1-209ENST00000583441 TMEM156Q8N614 296 aa1.56□□□□□ -2.16
SMCHD1-209ENST00000583441 LHFPL5Q8TAF8 219 aa1.56□□□□□ -2.16
SMCHD1-209ENST00000583441 C12orf43Q96C57 262 aaKnown RBP1.56□□□□□ -2.16
SMCHD1-209ENST00000583441 TXNDC17Q9BRA2 123 aa1.56□□□□□ -2.16
SMCHD1-209ENST00000583441 PECRQ9BY49 303 aa1.56□□□□□ -2.16
SMCHD1-209ENST00000583441 TTTY12Q9BZ98 90 aa1.56□□□□□ -2.16
SMCHD1-209ENST00000583441 MAP1LC3AQ9H492 121 aa1.56□□□□□ -2.16
SMCHD1-209ENST00000583441 FKBP14Q9NWM8 211 aa1.56□□□□□ -2.16
SMCHD1-209ENST00000583441 DKKL1Q9UK85 242 aa1.56□□□□□ -2.16
SMCHD1-209ENST00000583441 SLIT2O94813 1529 aa1.56□□□□□ -2.16
SMCHD1-209ENST00000583441 SHANK3Q9BYB0 1731 aa1.55□□□□□ -2.16
SMCHD1-209ENST00000583441 ADAMTSL1Q8N6G6 1762 aa1.55□□□□□ -2.16
SMCHD1-209ENST00000583441 DISC1C4P0D8 188 aa1.55□□□□□ -2.16
SMCHD1-209ENST00000583441 H0Y980 276 aa1.55□□□□□ -2.16
SMCHD1-209ENST00000583441 ZNF189O75820 626 aaPredicted RBP1.55□□□□□ -2.16
SMCHD1-209ENST00000583441 APOMO95445 188 aa1.55□□□□□ -2.16
SMCHD1-209ENST00000583441 NPYP01303 97 aa1.55□□□□□ -2.16
SMCHD1-209ENST00000583441 HLA-DQB2P05538 268 aa1.55□□□□□ -2.16
SMCHD1-209ENST00000583441 P0DMU3 169 aa1.55□□□□□ -2.16
SMCHD1-209ENST00000583441 FAM231AP0DMU4 169 aa1.55□□□□□ -2.16
SMCHD1-209ENST00000583441 FAM231CP0DMU5 169 aa1.55□□□□□ -2.16
SMCHD1-209ENST00000583441 RPL27AP46776 148 aaKnown RBP1.55□□□□□ -2.16
SMCHD1-209ENST00000583441 GABRA2P47869 451 aa1.55□□□□□ -2.16
SMCHD1-209ENST00000583441 XCL1P47992 114 aa1.55□□□□□ -2.16
SMCHD1-209ENST00000583441 SERPINB10P48595 397 aa1.55□□□□□ -2.16
SMCHD1-209ENST00000583441 BLVRAP53004 296 aa1.55□□□□□ -2.16
SMCHD1-209ENST00000583441 TBPL1P62380 186 aa1.55□□□□□ -2.16
SMCHD1-209ENST00000583441 PPP1R1AQ13522 171 aa1.55□□□□□ -2.16
SMCHD1-209ENST00000583441 SS18Q15532 418 aa1.55□□□□□ -2.16
SMCHD1-209ENST00000583441 TMEM31Q5JXX7 168 aa1.55□□□□□ -2.16
SMCHD1-209ENST00000583441 LGALS9CQ6DKI2 356 aa1.55□□□□□ -2.16
SMCHD1-209ENST00000583441 IQCF2Q8IXL9 164 aa1.55□□□□□ -2.16
SMCHD1-209ENST00000583441 ZNF283Q8N7M2 679 aa1.55□□□□□ -2.16
SMCHD1-209ENST00000583441 DAND5Q8N907 189 aa1.55□□□□□ -2.16
SMCHD1-209ENST00000583441 OR4X1Q8NH49 305 aa1.55□□□□□ -2.16
SMCHD1-209ENST00000583441 CLDND2Q8NHS1 167 aa1.55□□□□□ -2.16
SMCHD1-209ENST00000583441 DDI1Q8WTU0 396 aa1.55□□□□□ -2.16
SMCHD1-209ENST00000583441 OR51I2Q9H344 312 aa1.55□□□□□ -2.16
SMCHD1-209ENST00000583441 BABAM2Q9NXR7 383 aa1.55□□□□□ -2.16
SMCHD1-209ENST00000583441 NOSIPQ9Y314 301 aaKnown RBP1.55□□□□□ -2.16
SMCHD1-209ENST00000583441 TRPM3Q9HCF6 1732 aaPredicted RBP1.54□□□□□ -2.16
SMCHD1-209ENST00000583441 A0A1W2PQD3 144 aa1.54□□□□□ -2.16
SMCHD1-209ENST00000583441 C11orf86A6NJI1 115 aa1.54□□□□□ -2.16
SMCHD1-209ENST00000583441 C9JCJ5 164 aa1.54□□□□□ -2.16
SMCHD1-209ENST00000583441 H3BRN7 92 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms