RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 DNM1P34Q6PK57 102 aa2□□□□□ -2.09
SMARCE1-219ENST00000583294 LRRC34Q8IZ02 419 aa2□□□□□ -2.09
SMARCE1-219ENST00000583294 PACRGLQ8N7B6 248 aa2□□□□□ -2.09
SMARCE1-219ENST00000583294 DAND5Q8N907 189 aa2□□□□□ -2.09
SMARCE1-219ENST00000583294 NKX6-2Q9C056 277 aaPredicted RBP2□□□□□ -2.09
SMARCE1-219ENST00000583294 MS4A6AQ9H2W1 248 aa2□□□□□ -2.09
SMARCE1-219ENST00000583294 EURLQ9NYK6 297 aa2□□□□□ -2.09
SMARCE1-219ENST00000583294 EMC3Q9P0I2 261 aa2□□□□□ -2.09
SMARCE1-219ENST00000583294 PRRC2BQ5JSZ5 2229 aaKnown RBP1.99□□□□□ -2.09
SMARCE1-219ENST00000583294 TINCRA0A1B0GVN0 87 aa1.99□□□□□ -2.09
SMARCE1-219ENST00000583294 ARRDC5A6NEK1 342 aa1.99□□□□□ -2.09
SMARCE1-219ENST00000583294 J3QQQ9 107 aa1.99□□□□□ -2.09
SMARCE1-219ENST00000583294 OCMP0CE72 109 aaPredicted RBP1.99□□□□□ -2.09
SMARCE1-219ENST00000583294 CASQ1P31415 396 aa1.99□□□□□ -2.09
SMARCE1-219ENST00000583294 TMEM33P57088 247 aa1.99□□□□□ -2.09
SMARCE1-219ENST00000583294 RPL26P61254 145 aaKnown RBP1.99□□□□□ -2.09
SMARCE1-219ENST00000583294 TPRXLQ17RH7 258 aa1.99□□□□□ -2.09
SMARCE1-219ENST00000583294 CD302Q8IX05 232 aa1.99□□□□□ -2.09
SMARCE1-219ENST00000583294 ZNF625Q96I27 306 aaPredicted RBP1.99□□□□□ -2.09
SMARCE1-219ENST00000583294 RPL26L1Q9UNX3 145 aaKnown RBP1.99□□□□□ -2.09
SMARCE1-219ENST00000583294 A0A1W2PP64 1363 aa1.98□□□□□ -2.09
SMARCE1-219ENST00000583294 IGLV3-9A0A075B6K5 115 aa1.98□□□□□ -2.09
SMARCE1-219ENST00000583294 HPGDSO60760 199 aa1.98□□□□□ -2.09
SMARCE1-219ENST00000583294 ZNF728P0DKX0 622 aa1.98□□□□□ -2.09
SMARCE1-219ENST00000583294 XCL1P47992 114 aa1.98□□□□□ -2.09
SMARCE1-219ENST00000583294 RPL14P50914 215 aaKnown RBP1.98□□□□□ -2.09
SMARCE1-219ENST00000583294 TAS2R30P59541 319 aa1.98□□□□□ -2.09
SMARCE1-219ENST00000583294 BTN3A2P78410 334 aa1.98□□□□□ -2.09
SMARCE1-219ENST00000583294 SLC35G5Q96KT7 338 aa1.98□□□□□ -2.09
SMARCE1-219ENST00000583294 TMEM109Q9BVC6 243 aa1.98□□□□□ -2.09
SMARCE1-219ENST00000583294 SLC22A4Q9H015 551 aa1.98□□□□□ -2.09
SMARCE1-219ENST00000583294 PCYT1BQ9Y5K3 369 aaPredicted RBP1.98□□□□□ -2.09
SMARCE1-219ENST00000583294 RTEL1-TNFRSF6BF6WH68 1400 aa1.98□□□□□ -2.09
SMARCE1-219ENST00000583294 RAD50Q92878 1312 aa1.97□□□□□ -2.09
SMARCE1-219ENST00000583294 NYNRINQ9P2P1 1898 aaKnown RBP1.97□□□□□ -2.09
SMARCE1-219ENST00000583294 A0A1B0GVG6 124 aa1.97□□□□□ -2.09
SMARCE1-219ENST00000583294 C2orf74A8MZ97 194 aa1.97□□□□□ -2.09
SMARCE1-219ENST00000583294 IL6P05231 212 aa1.97□□□□□ -2.09
SMARCE1-219ENST00000583294 UGT2B7P16662 529 aa1.97□□□□□ -2.09
SMARCE1-219ENST00000583294 IFNGR2P38484 337 aa1.97□□□□□ -2.09
SMARCE1-219ENST00000583294 FABP5Q01469 135 aa1.97□□□□□ -2.09
SMARCE1-219ENST00000583294 Q6ZS52 159 aa1.97□□□□□ -2.09
SMARCE1-219ENST00000583294 SPATA12Q7Z6I5 190 aa1.97□□□□□ -2.09
SMARCE1-219ENST00000583294 AMMECR1Q9Y4X0 333 aaPredicted RBP1.97□□□□□ -2.09
SMARCE1-219ENST00000583294 THSD7AQ9UPZ6 1657 aa1.96□□□□□ -2.1
SMARCE1-219ENST00000583294 RFPL4AA6NLU0 287 aa1.96□□□□□ -2.1
SMARCE1-219ENST00000583294 RFPL4AL1F8VTS6 287 aa1.96□□□□□ -2.1
SMARCE1-219ENST00000583294 BIRC5O15392 142 aa1.96□□□□□ -2.1
SMARCE1-219ENST00000583294 BPGMP07738 259 aa1.96□□□□□ -2.1
SMARCE1-219ENST00000583294 HIST1H1CP16403 213 aaKnown RBP1.96□□□□□ -2.1
SMARCE1-219ENST00000583294 CD40LGP29965 261 aa1.96□□□□□ -2.1
SMARCE1-219ENST00000583294 CD151P48509 253 aa1.96□□□□□ -2.1
SMARCE1-219ENST00000583294 GNA12Q03113 381 aa1.96□□□□□ -2.1
SMARCE1-219ENST00000583294 UAP1Q16222 522 aaPredicted RBP1.96□□□□□ -2.1
SMARCE1-219ENST00000583294 FAM19A5Q7Z5A7 132 aaPredicted RBP1.96□□□□□ -2.1
SMARCE1-219ENST00000583294 LHFPL1Q86WI0 220 aa1.96□□□□□ -2.1
SMARCE1-219ENST00000583294 ASB13Q8WXK3 278 aa1.96□□□□□ -2.1
SMARCE1-219ENST00000583294 RNASE6Q93091 150 aaKnown RBP1.96□□□□□ -2.1
SMARCE1-219ENST00000583294 CPNE2Q96FN4 548 aaPredicted RBP1.96□□□□□ -2.1
SMARCE1-219ENST00000583294 NMNAT3Q96T66 252 aa1.96□□□□□ -2.1
SMARCE1-219ENST00000583294 TIMM21Q9BVV7 248 aa1.96□□□□□ -2.1
SMARCE1-219ENST00000583294 PRO2289Q9P1D8 64 aa1.96□□□□□ -2.1
SMARCE1-219ENST00000583294 KIAA2026Q5HYC2 2103 aa1.96□□□□□ -2.1
SMARCE1-219ENST00000583294 DENND4BO75064 1496 aaPredicted RBP1.95□□□□□ -2.1
SMARCE1-219ENST00000583294 A0A1W2PQD3 144 aa1.95□□□□□ -2.1
SMARCE1-219ENST00000583294 COCHO43405 550 aa1.95□□□□□ -2.1
SMARCE1-219ENST00000583294 CD79BP40259 229 aa1.95□□□□□ -2.1
SMARCE1-219ENST00000583294 RAP1GDS1P52306 607 aa1.95□□□□□ -2.1
SMARCE1-219ENST00000583294 HLA-DRB3P79483 266 aa1.95□□□□□ -2.1
SMARCE1-219ENST00000583294 ERHP84090 104 aaKnown RBP1.95□□□□□ -2.1
SMARCE1-219ENST00000583294 ZNF90Q03938 601 aa1.95□□□□□ -2.1
SMARCE1-219ENST00000583294 HSP90B2PQ58FF3 399 aa1.95□□□□□ -2.1
SMARCE1-219ENST00000583294 PDPK2PQ6A1A2 396 aa1.95□□□□□ -2.1
SMARCE1-219ENST00000583294 PLEKHG7Q6ZR37 379 aa1.95□□□□□ -2.1
SMARCE1-219ENST00000583294 CLDND2Q8NHS1 167 aa1.95□□□□□ -2.1
SMARCE1-219ENST00000583294 C12orf43Q96C57 262 aaKnown RBP1.95□□□□□ -2.1
SMARCE1-219ENST00000583294 MS4A6EQ96DS6 147 aa1.95□□□□□ -2.1
SMARCE1-219ENST00000583294 SFRP2Q96HF1 295 aa1.95□□□□□ -2.1
SMARCE1-219ENST00000583294 DHRS9Q9BPW9 319 aa1.95□□□□□ -2.1
SMARCE1-219ENST00000583294 DERL2Q9GZP9 239 aa1.95□□□□□ -2.1
SMARCE1-219ENST00000583294 IMP3Q9NV31 184 aaKnown RBP1.95□□□□□ -2.1
SMARCE1-219ENST00000583294 CRCT1Q9UGL9 99 aa1.95□□□□□ -2.1
SMARCE1-219ENST00000583294 POLR3HQ9Y535 204 aaPredicted RBP1.95□□□□□ -2.1
SMARCE1-219ENST00000583294 FN1P02751 2386 aaKnown RBP1.95□□□□□ -2.1
SMARCE1-219ENST00000583294 KDM5BQ9UGL1 1544 aa1.95□□□□□ -2.1
SMARCE1-219ENST00000583294 TMED7-TICAM2A0A0A6YYA0 188 aa1.94□□□□□ -2.1
SMARCE1-219ENST00000583294 TEX50A0A1B0GTY4 177 aa1.94□□□□□ -2.1
SMARCE1-219ENST00000583294 SIGLEC16A6NMB1 481 aa1.94□□□□□ -2.1
SMARCE1-219ENST00000583294 F5H768 121 aa1.94□□□□□ -2.1
SMARCE1-219ENST00000583294 TXNDC9O14530 226 aa1.94□□□□□ -2.1
SMARCE1-219ENST00000583294 NDUFB2O95178 105 aa1.94□□□□□ -2.1
SMARCE1-219ENST00000583294 PRB1P04280 392 aa1.94□□□□□ -2.1
SMARCE1-219ENST00000583294 HLA-DQB2P05538 268 aa1.94□□□□□ -2.1
SMARCE1-219ENST00000583294 GABRA2P47869 451 aa1.94□□□□□ -2.1
SMARCE1-219ENST00000583294 SNAP25P60880 206 aa1.94□□□□□ -2.1
SMARCE1-219ENST00000583294 JOSD1Q15040 202 aaPredicted RBP1.94□□□□□ -2.1
SMARCE1-219ENST00000583294 SAPCD1Q5SSQ6 148 aa1.94□□□□□ -2.1
SMARCE1-219ENST00000583294 SLC35E3Q7Z769 313 aa1.94□□□□□ -2.1
SMARCE1-219ENST00000583294 NAA40Q86UY6 237 aa1.94□□□□□ -2.1
SMARCE1-219ENST00000583294 OR5J2Q8NH18 312 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms