RNA–Protein interactions for RNA: ENST00000583182.5

CDK5RAP3-226, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 709 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-226ENST00000583182 PTX4Q96A99 478 aa11.17□□□□□ -0.62
CDK5RAP3-226ENST00000583182 NEURL2Q9BR09 285 aa11.17□□□□□ -0.62
CDK5RAP3-226ENST00000583182 WFDC10AQ9H1F0 79 aa11.17□□□□□ -0.62
CDK5RAP3-226ENST00000583182 ERICH4A6NGS2 130 aa11.16□□□□□ -0.62
CDK5RAP3-226ENST00000583182 ZNF785A8K8V0 405 aa11.16□□□□□ -0.62
CDK5RAP3-226ENST00000583182 TPPPO94811 219 aa11.16□□□□□ -0.62
CDK5RAP3-226ENST00000583182 OR2A4O95047 310 aa11.16□□□□□ -0.62
CDK5RAP3-226ENST00000583182 APOA2P02652 100 aa11.16□□□□□ -0.62
CDK5RAP3-226ENST00000583182 SCTP09683 121 aa11.16□□□□□ -0.62
CDK5RAP3-226ENST00000583182 APELAP0DMC3 54 aa11.16□□□□□ -0.62
CDK5RAP3-226ENST00000583182 TAS2R43P59537 309 aa11.16□□□□□ -0.62
CDK5RAP3-226ENST00000583182 MED21Q13503 144 aa11.16□□□□□ -0.62
CDK5RAP3-226ENST00000583182 CD300EQ496F6 205 aaPredicted RBP11.16□□□□□ -0.62
CDK5RAP3-226ENST00000583182 C1orf100Q5SVJ3 147 aa11.16□□□□□ -0.62
CDK5RAP3-226ENST00000583182 ZNF555Q8NEP9 628 aa11.16□□□□□ -0.62
CDK5RAP3-226ENST00000583182 OR2K2Q8NGT1 345 aa11.16□□□□□ -0.62
CDK5RAP3-226ENST00000583182 LINC00476Q8WZB0 136 aa11.16□□□□□ -0.62
CDK5RAP3-226ENST00000583182 GGHQ92820 318 aa11.16□□□□□ -0.62
CDK5RAP3-226ENST00000583182 USMG5Q96IX5 58 aa11.16□□□□□ -0.62
CDK5RAP3-226ENST00000583182 TMEM68Q96MH6 324 aa11.16□□□□□ -0.62
CDK5RAP3-226ENST00000583182 SLC35D1Q9NTN3 355 aa11.16□□□□□ -0.62
CDK5RAP3-226ENST00000583182 PLEKHJ1Q9NW61 149 aa11.16□□□□□ -0.62
CDK5RAP3-226ENST00000583182 COA4Q9NYJ1 87 aa11.16□□□□□ -0.62
CDK5RAP3-226ENST00000583182 AK3Q9UIJ7 227 aa11.16□□□□□ -0.62
CDK5RAP3-226ENST00000583182 ZNF221Q9UK13 617 aa11.16□□□□□ -0.62
CDK5RAP3-226ENST00000583182 HERC2O95714 4834 aa11.15□□□□□ -0.62
CDK5RAP3-226ENST00000583182 IGKV1-6A0A0C4DH72 117 aa11.15□□□□□ -0.62
CDK5RAP3-226ENST00000583182 TMEM14DPA8MWL7 114 aa11.15□□□□□ -0.62
CDK5RAP3-226ENST00000583182 M0R1X1 148 aa11.15□□□□□ -0.62
CDK5RAP3-226ENST00000583182 EBAG9O00559 213 aa11.15□□□□□ -0.62
CDK5RAP3-226ENST00000583182 CD1AP06126 327 aa11.15□□□□□ -0.62
CDK5RAP3-226ENST00000583182 LGALS7P47929 136 aa11.15□□□□□ -0.62
CDK5RAP3-226ENST00000583182 QRFPP83859 136 aa11.15□□□□□ -0.62
CDK5RAP3-226ENST00000583182 ST3GAL4Q11206 333 aa11.15□□□□□ -0.62
CDK5RAP3-226ENST00000583182 MRGPRG-AS1Q2M3A8 158 aa11.15□□□□□ -0.62
CDK5RAP3-226ENST00000583182 LRRTM1Q86UE6 522 aa11.15□□□□□ -0.62
CDK5RAP3-226ENST00000583182 KCNG3Q8TAE7 436 aa11.15□□□□□ -0.62
CDK5RAP3-226ENST00000583182 SNAPC3Q92966 411 aa11.15□□□□□ -0.62
CDK5RAP3-226ENST00000583182 SMPD3Q9NY59 655 aaPredicted RBP11.15□□□□□ -0.62
CDK5RAP3-226ENST00000583182 PEMTQ9UBM1 199 aa11.15□□□□□ -0.62
CDK5RAP3-226ENST00000583182 EFCAB10A6NFE3 127 aa11.14□□□□□ -0.63
CDK5RAP3-226ENST00000583182 BMPR1BO00238 502 aa11.14□□□□□ -0.63
CDK5RAP3-226ENST00000583182 SOCS1O15524 211 aa11.14□□□□□ -0.63
CDK5RAP3-226ENST00000583182 MAPK3P27361 379 aaPredicted RBP11.14□□□□□ -0.63
CDK5RAP3-226ENST00000583182 LAX1Q8IWV1 398 aa11.14□□□□□ -0.63
CDK5RAP3-226ENST00000583182 PQLC1Q8N2U9 271 aa11.14□□□□□ -0.63
CDK5RAP3-226ENST00000583182 ADAD2Q8NCV1 583 aaKnown RBP11.14□□□□□ -0.63
CDK5RAP3-226ENST00000583182 THRSPQ92748 146 aa11.14□□□□□ -0.63
CDK5RAP3-226ENST00000583182 LPAR5Q9H1C0 372 aa11.14□□□□□ -0.63
CDK5RAP3-226ENST00000583182 RIMS4Q9H426 269 aaPredicted RBP11.14□□□□□ -0.63
CDK5RAP3-226ENST00000583182 SRD5A3Q9H8P0 318 aa11.14□□□□□ -0.63
CDK5RAP3-226ENST00000583182 Q9N2K0 584 aa11.14□□□□□ -0.63
CDK5RAP3-226ENST00000583182 SLC2A8Q9NY64 477 aa11.14□□□□□ -0.63
CDK5RAP3-226ENST00000583182 KMT2AQ03164 3969 aa11.13□□□□□ -0.63
CDK5RAP3-226ENST00000583182 A0A0B4J203 849 aa11.13□□□□□ -0.63
CDK5RAP3-226ENST00000583182 MSGN1A6NI15 193 aa11.13□□□□□ -0.63
CDK5RAP3-226ENST00000583182 SRRM4A7MD48 611 aaKnown RBP11.13□□□□□ -0.63
CDK5RAP3-226ENST00000583182 OR11H12B2RN74 326 aa11.13□□□□□ -0.63
CDK5RAP3-226ENST00000583182 AIREO43918 545 aa11.13□□□□□ -0.63
CDK5RAP3-226ENST00000583182 EDN2P20800 178 aa11.13□□□□□ -0.63
CDK5RAP3-226ENST00000583182 GLT8D1Q68CQ7 371 aa11.13□□□□□ -0.63
CDK5RAP3-226ENST00000583182 HARBI1Q96MB7 349 aa11.13□□□□□ -0.63
CDK5RAP3-226ENST00000583182 S100A14Q9HCY8 104 aa11.13□□□□□ -0.63
CDK5RAP3-226ENST00000583182 RDH8Q9NYR8 311 aa11.13□□□□□ -0.63
CDK5RAP3-226ENST00000583182 ZNF230Q9UIE0 474 aaPredicted RBP11.13□□□□□ -0.63
CDK5RAP3-226ENST00000583182 FOXI3A8MTJ6 420 aaPredicted RBP11.12□□□□□ -0.63
CDK5RAP3-226ENST00000583182 PRH1P02810 166 aa11.12□□□□□ -0.63
CDK5RAP3-226ENST00000583182 WNT4P56705 351 aa11.12□□□□□ -0.63
CDK5RAP3-226ENST00000583182 RHOGP84095 191 aa11.12□□□□□ -0.63
CDK5RAP3-226ENST00000583182 ZNF45Q02386 682 aa11.12□□□□□ -0.63
CDK5RAP3-226ENST00000583182 DEFB114Q30KQ6 69 aa11.12□□□□□ -0.63
CDK5RAP3-226ENST00000583182 ACSM3Q53FZ2 586 aa11.12□□□□□ -0.63
CDK5RAP3-226ENST00000583182 RBM48Q5RL73 367 aaKnown RBP11.12□□□□□ -0.63
CDK5RAP3-226ENST00000583182 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.12□□□□□ -0.63
CDK5RAP3-226ENST00000583182 C5orf30Q96GV9 206 aa11.12□□□□□ -0.63
CDK5RAP3-226ENST00000583182 PHB2Q99623 299 aa11.12□□□□□ -0.63
CDK5RAP3-226ENST00000583182 AKIP1Q9NQ31 210 aa11.12□□□□□ -0.63
CDK5RAP3-226ENST00000583182 MGAT4AQ9UM21 535 aa11.12□□□□□ -0.63
CDK5RAP3-226ENST00000583182 DNAH10Q8IVF4 4471 aa11.11□□□□□ -0.63
CDK5RAP3-226ENST00000583182 MYL12BO14950 172 aa11.11□□□□□ -0.63
CDK5RAP3-226ENST00000583182 SHOXO15266 292 aa11.11□□□□□ -0.63
CDK5RAP3-226ENST00000583182 LY6G6CO95867 125 aa11.11□□□□□ -0.63
CDK5RAP3-226ENST00000583182 CD3GP09693 182 aa11.11□□□□□ -0.63
CDK5RAP3-226ENST00000583182 OR9G9P0C7N8 305 aa11.11□□□□□ -0.63
CDK5RAP3-226ENST00000583182 CD37P11049 281 aa11.11□□□□□ -0.63
CDK5RAP3-226ENST00000583182 SRMP19623 302 aa11.11□□□□□ -0.63
CDK5RAP3-226ENST00000583182 TMEM50BP56557 158 aa11.11□□□□□ -0.63
CDK5RAP3-226ENST00000583182 EXOSC2Q13868 293 aaKnown RBP11.11□□□□□ -0.63
CDK5RAP3-226ENST00000583182 GUCA2BQ16661 112 aa11.11□□□□□ -0.63
CDK5RAP3-226ENST00000583182 TMEM177Q53S58 311 aa11.11□□□□□ -0.63
CDK5RAP3-226ENST00000583182 LAIR2Q6ISS4 152 aa11.11□□□□□ -0.63
CDK5RAP3-226ENST00000583182 FAM89BQ8N5H3 189 aa11.11□□□□□ -0.63
CDK5RAP3-226ENST00000583182 DYNLRB2Q8TF09 96 aa11.11□□□□□ -0.63
CDK5RAP3-226ENST00000583182 CYGBQ8WWM9 190 aa11.11□□□□□ -0.63
CDK5RAP3-226ENST00000583182 PHYHIPQ92561 330 aa11.11□□□□□ -0.63
CDK5RAP3-226ENST00000583182 OR2D2Q9H210 308 aa11.11□□□□□ -0.63
CDK5RAP3-226ENST00000583182 C12orf4Q9NQ89 552 aa11.11□□□□□ -0.63
CDK5RAP3-226ENST00000583182 ZC4H2Q9NQZ6 224 aa11.11□□□□□ -0.63
CDK5RAP3-226ENST00000583182 SDHAF2Q9NX18 166 aa11.11□□□□□ -0.63
CDK5RAP3-226ENST00000583182 HSF4Q9ULV5 492 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms