RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 ZNF585BQ52M93 769 aa11.46□□□□□ -0.57
SRSF1-205ENST00000582730 ZNF474Q6S9Z5 364 aaPredicted RBP11.46□□□□□ -0.57
SRSF1-205ENST00000582730 CYB561D1Q8N8Q1 229 aa11.46□□□□□ -0.57
SRSF1-205ENST00000582730 RNF115Q9Y4L5 304 aa11.46□□□□□ -0.57
SRSF1-205ENST00000582730 FAM215AQ9Y5M1 114 aa11.46□□□□□ -0.57
SRSF1-205ENST00000582730 NBEAQ8NFP9 2946 aa11.46□□□□□ -0.57
SRSF1-205ENST00000582730 IGHV3OR15-7A0A075B7D8 119 aa11.46□□□□□ -0.58
SRSF1-205ENST00000582730 BTBD17A6NE02 478 aa11.46□□□□□ -0.58
SRSF1-205ENST00000582730 TSTD3H0UI37 97 aa11.46□□□□□ -0.58
SRSF1-205ENST00000582730 SPRY3O43610 288 aa11.46□□□□□ -0.58
SRSF1-205ENST00000582730 KRASP01116 189 aa11.46□□□□□ -0.58
SRSF1-205ENST00000582730 CRYAAP02489 173 aa11.46□□□□□ -0.58
SRSF1-205ENST00000582730 METTL15P1P0C7V9 234 aa11.46□□□□□ -0.58
SRSF1-205ENST00000582730 TRGC1P0CF51 173 aa11.46□□□□□ -0.58
SRSF1-205ENST00000582730 BAXQ07812 192 aa11.46□□□□□ -0.58
SRSF1-205ENST00000582730 ODF3L1Q8IXM7 274 aa11.46□□□□□ -0.58
SRSF1-205ENST00000582730 OR13A1Q8NGR1 328 aa11.46□□□□□ -0.58
SRSF1-205ENST00000582730 ABHD5Q8WTS1 349 aa11.46□□□□□ -0.58
SRSF1-205ENST00000582730 FRZBQ92765 325 aa11.46□□□□□ -0.58
SRSF1-205ENST00000582730 ELOA3CA0A087WX78 387 aaPredicted RBP11.45□□□□□ -0.58
SRSF1-205ENST00000582730 PIGBOS1A0A0B4J2F0 54 aa11.45□□□□□ -0.58
SRSF1-205ENST00000582730 SYNGR2O43760 224 aa11.45□□□□□ -0.58
SRSF1-205ENST00000582730 RAMP3O60896 148 aa11.45□□□□□ -0.58
SRSF1-205ENST00000582730 MSMPQ1L6U9 139 aa11.45□□□□□ -0.58
SRSF1-205ENST00000582730 SLC35E4Q6ICL7 350 aa11.45□□□□□ -0.58
SRSF1-205ENST00000582730 PSENENQ9NZ42 101 aa11.45□□□□□ -0.58
SRSF1-205ENST00000582730 RNF212BA8MTL3 300 aa11.45□□□□□ -0.58
SRSF1-205ENST00000582730 EGR1P18146 543 aa11.45□□□□□ -0.58
SRSF1-205ENST00000582730 BMP5P22003 454 aa11.45□□□□□ -0.58
SRSF1-205ENST00000582730 SPANXN5Q5MJ07 72 aa11.45□□□□□ -0.58
SRSF1-205ENST00000582730 Q6ZS92 163 aa11.45□□□□□ -0.58
SRSF1-205ENST00000582730 TVP23CQ96ET8 276 aa11.45□□□□□ -0.58
SRSF1-205ENST00000582730 KIAA1456Q9P272 454 aa11.45□□□□□ -0.58
SRSF1-205ENST00000582730 SH3BGRL2Q9UJC5 107 aa11.45□□□□□ -0.58
SRSF1-205ENST00000582730 RBMXL2O75526 392 aaKnown RBP11.44□□□□□ -0.58
SRSF1-205ENST00000582730 IGHV3-13P01766 116 aa11.44□□□□□ -0.58
SRSF1-205ENST00000582730 IGHV3-7P01780 117 aa11.44□□□□□ -0.58
SRSF1-205ENST00000582730 MMP9P14780 707 aa11.44□□□□□ -0.58
SRSF1-205ENST00000582730 G6PCP35575 357 aa11.44□□□□□ -0.58
SRSF1-205ENST00000582730 ACACAQ13085 2346 aa11.44□□□□□ -0.58
SRSF1-205ENST00000582730 HNF4GQ14541 408 aa11.44□□□□□ -0.58
SRSF1-205ENST00000582730 C4orf17Q53FE4 359 aa11.44□□□□□ -0.58
SRSF1-205ENST00000582730 AKR1C8PQ5T2L2 129 aa11.44□□□□□ -0.58
SRSF1-205ENST00000582730 C1orf185Q5T7R7 199 aa11.44□□□□□ -0.58
SRSF1-205ENST00000582730 MBNL2Q5VZF2 373 aaKnown RBP11.44□□□□□ -0.58
SRSF1-205ENST00000582730 ZNF645Q8N7E2 425 aa11.44□□□□□ -0.58
SRSF1-205ENST00000582730 RAB40CQ96S21 281 aa11.44□□□□□ -0.58
SRSF1-205ENST00000582730 ATP5SQ99766 215 aa11.44□□□□□ -0.58
SRSF1-205ENST00000582730 NIPSNAP3BQ9BS92 247 aa11.44□□□□□ -0.58
SRSF1-205ENST00000582730 IFNA5P01569 189 aa11.44□□□□□ -0.58
SRSF1-205ENST00000582730 ICAM4Q14773 271 aa11.44□□□□□ -0.58
SRSF1-205ENST00000582730 RTP5Q14D33 572 aa11.44□□□□□ -0.58
SRSF1-205ENST00000582730 THNSL2Q86YJ6 484 aa11.44□□□□□ -0.58
SRSF1-205ENST00000582730 FGFRL1Q8N441 504 aa11.44□□□□□ -0.58
SRSF1-205ENST00000582730 CD177Q8N6Q3 437 aa11.44□□□□□ -0.58
SRSF1-205ENST00000582730 RBMXL3Q8N7X1 1067 aaKnown RBP11.44□□□□□ -0.58
SRSF1-205ENST00000582730 MISP3Q96FF7 219 aa11.44□□□□□ -0.58
SRSF1-205ENST00000582730 SIRT7Q9NRC8 400 aa11.44□□□□□ -0.58
SRSF1-205ENST00000582730 WSB1Q9Y6I7 421 aa11.44□□□□□ -0.58
SRSF1-205ENST00000582730 SCAF4O95104 1147 aaKnown RBP11.44□□□□□ -0.58
SRSF1-205ENST00000582730 IFNA10P01566 189 aa11.44□□□□□ -0.58
SRSF1-205ENST00000582730 PRDX2P32119 198 aa11.44□□□□□ -0.58
SRSF1-205ENST00000582730 RPL30P62888 115 aaKnown RBP11.44□□□□□ -0.58
SRSF1-205ENST00000582730 SSX2Q16385 188 aa11.44□□□□□ -0.58
SRSF1-205ENST00000582730 DNLZQ5SXM8 178 aa11.44□□□□□ -0.58
SRSF1-205ENST00000582730 MOGAT3Q86VF5 341 aa11.44□□□□□ -0.58
SRSF1-205ENST00000582730 OR13D1Q8NGV5 346 aa11.44□□□□□ -0.58
SRSF1-205ENST00000582730 LSM10Q969L4 123 aaKnown RBP11.44□□□□□ -0.58
SRSF1-205ENST00000582730 OR2V2Q96R30 315 aa11.44□□□□□ -0.58
SRSF1-205ENST00000582730 SSX3Q99909 188 aa11.44□□□□□ -0.58
SRSF1-205ENST00000582730 PSG11Q9UQ72 335 aa11.44□□□□□ -0.58
SRSF1-205ENST00000582730 CHD3Q12873 2000 aaKnown RBP11.43□□□□□ -0.58
SRSF1-205ENST00000582730 NUBP1P53384 320 aa11.43□□□□□ -0.58
SRSF1-205ENST00000582730 EDDM3BP56851 147 aa11.43□□□□□ -0.58
SRSF1-205ENST00000582730 LINC00205P59089 165 aa11.43□□□□□ -0.58
SRSF1-205ENST00000582730 IGFL3Q6UXB1 125 aa11.43□□□□□ -0.58
SRSF1-205ENST00000582730 PACRGQ96M98 296 aaPredicted RBP11.43□□□□□ -0.58
SRSF1-205ENST00000582730 CLDN1O95832 211 aa11.43□□□□□ -0.58
SRSF1-205ENST00000582730 CRYABP02511 175 aaKnown RBP11.43□□□□□ -0.58
SRSF1-205ENST00000582730 TUBG1P23258 451 aa11.43□□□□□ -0.58
SRSF1-205ENST00000582730 KLF3P57682 345 aaPredicted RBP11.43□□□□□ -0.58
SRSF1-205ENST00000582730 CD81P60033 236 aa11.43□□□□□ -0.58
SRSF1-205ENST00000582730 MZT1Q08AG7 82 aa11.43□□□□□ -0.58
SRSF1-205ENST00000582730 CATR1Q13166 79 aa11.43□□□□□ -0.58
SRSF1-205ENST00000582730 SPRNQ5BIV9 151 aa11.43□□□□□ -0.58
SRSF1-205ENST00000582730 GNPNAT1Q96EK6 184 aaPredicted RBP11.43□□□□□ -0.58
SRSF1-205ENST00000582730 FAM210BQ96KR6 192 aa11.43□□□□□ -0.58
SRSF1-205ENST00000582730 TUBG2Q9NRH3 451 aa11.43□□□□□ -0.58
SRSF1-205ENST00000582730 USF3Q68DE3 2245 aa11.43□□□□□ -0.58
SRSF1-205ENST00000582730 SPINT2O43291 252 aa11.42□□□□□ -0.58
SRSF1-205ENST00000582730 DFFBO76075 338 aa11.42□□□□□ -0.58
SRSF1-205ENST00000582730 FAM27E3Q08E93 113 aa11.42□□□□□ -0.58
SRSF1-205ENST00000582730 TIMM23BQ5SRD1 257 aa11.42□□□□□ -0.58
SRSF1-205ENST00000582730 ZNF295-AS1Q8N0V1 137 aa11.42□□□□□ -0.58
SRSF1-205ENST00000582730 SCGB1C1Q8TD33 95 aa11.42□□□□□ -0.58
SRSF1-205ENST00000582730 FAM234AQ9H0X4 552 aa11.42□□□□□ -0.58
SRSF1-205ENST00000582730 GNG12Q9UBI6 72 aa11.42□□□□□ -0.58
SRSF1-205ENST00000582730 PIEZO2Q9H5I5 2752 aa11.42□□□□□ -0.58
SRSF1-205ENST00000582730 APC2O95996 2303 aa11.42□□□□□ -0.58
SRSF1-205ENST00000582730 KIAA1324LA8MWY0 1029 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms