RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 IGKV1-8A0A0C4DH67 115 aa12.52□□□□□ -0.4
CSNK1D-217ENST00000581241 SMIM13P0DJ93 91 aa12.52□□□□□ -0.4
CSNK1D-217ENST00000581241 SCN1AP35498 2009 aa12.52□□□□□ -0.4
CSNK1D-217ENST00000581241 MAFAQ8NHW3 353 aaPredicted RBP12.52□□□□□ -0.4
CSNK1D-217ENST00000581241 C16orf92Q96LL3 132 aa12.52□□□□□ -0.4
CSNK1D-217ENST00000581241 WFIKKN1Q96NZ8 548 aa12.52□□□□□ -0.4
CSNK1D-217ENST00000581241 MRPL32Q9BYC8 188 aaKnown RBP12.52□□□□□ -0.4
CSNK1D-217ENST00000581241 EFNB1P98172 346 aa12.52□□□□□ -0.41
CSNK1D-217ENST00000581241 OR4A5Q8NH83 315 aa12.52□□□□□ -0.41
CSNK1D-217ENST00000581241 IFI6P09912 130 aa12.52□□□□□ -0.41
CSNK1D-217ENST00000581241 CCL4P13236 92 aa12.52□□□□□ -0.41
CSNK1D-217ENST00000581241 PKIBQ9C010 78 aa12.52□□□□□ -0.41
CSNK1D-217ENST00000581241 IDI2-AS1Q9NZ38 188 aa12.52□□□□□ -0.41
CSNK1D-217ENST00000581241 EIF4EBP2Q13542 120 aaPredicted RBP12.52□□□□□ -0.41
CSNK1D-217ENST00000581241 METTL26Q96S19 204 aa12.52□□□□□ -0.41
CSNK1D-217ENST00000581241 IGHV1-45A0A0A0MS14 117 aa12.51□□□□□ -0.41
CSNK1D-217ENST00000581241 ANOS1P23352 680 aa12.51□□□□□ -0.41
CSNK1D-217ENST00000581241 UCP3P55916 312 aa12.51□□□□□ -0.41
CSNK1D-217ENST00000581241 LOXL3P58215 753 aa12.51□□□□□ -0.41
CSNK1D-217ENST00000581241 SNAI3Q3KNW1 292 aa12.51□□□□□ -0.41
CSNK1D-217ENST00000581241 WFDC6Q9BQY6 131 aa12.51□□□□□ -0.41
CSNK1D-217ENST00000581241 C8orf88P0DMB2 117 aa12.51□□□□□ -0.41
CSNK1D-217ENST00000581241 C19orf24Q9BVV8 132 aa12.51□□□□□ -0.41
CSNK1D-217ENST00000581241 A0A0J9YW62 118 aa12.51□□□□□ -0.41
CSNK1D-217ENST00000581241 PRF1P14222 555 aa12.51□□□□□ -0.41
CSNK1D-217ENST00000581241 RPL8P62917 257 aaKnown RBP12.51□□□□□ -0.41
CSNK1D-217ENST00000581241 Q96M66 194 aa12.51□□□□□ -0.41
CSNK1D-217ENST00000581241 CHRNA10Q9GZZ6 450 aa12.51□□□□□ -0.41
CSNK1D-217ENST00000581241 DNAJC4Q9NNZ3 241 aa12.51□□□□□ -0.41
CSNK1D-217ENST00000581241 ZNF646O15015 1829 aaPredicted RBP12.51□□□□□ -0.41
CSNK1D-217ENST00000581241 ZFC3H1O60293 1989 aaKnown RBP12.51□□□□□ -0.41
CSNK1D-217ENST00000581241 GRIFINA4D1Z8 144 aa12.51□□□□□ -0.41
CSNK1D-217ENST00000581241 ZG16O60844 167 aa12.51□□□□□ -0.41
CSNK1D-217ENST00000581241 ARL6IP6Q8N6S5 226 aa12.51□□□□□ -0.41
CSNK1D-217ENST00000581241 OR8G5Q8NG78 346 aa12.51□□□□□ -0.41
CSNK1D-217ENST00000581241 PILRAQ9UKJ1 303 aa12.51□□□□□ -0.41
CSNK1D-217ENST00000581241 SS18L1O75177 396 aaPredicted RBP12.51□□□□□ -0.41
CSNK1D-217ENST00000581241 SSTR5P35346 364 aa12.51□□□□□ -0.41
CSNK1D-217ENST00000581241 KCNMB1Q16558 191 aa12.51□□□□□ -0.41
CSNK1D-217ENST00000581241 ZNF362Q5T0B9 420 aaPredicted RBP12.51□□□□□ -0.41
CSNK1D-217ENST00000581241 ZNF818PQ6ZRF7 136 aa12.51□□□□□ -0.41
CSNK1D-217ENST00000581241 TPRX1Q8N7U7 411 aa12.51□□□□□ -0.41
CSNK1D-217ENST00000581241 CCL13Q99616 98 aa12.51□□□□□ -0.41
CSNK1D-217ENST00000581241 RGPD3A6NKT7 1758 aaPredicted RBP12.51□□□□□ -0.41
CSNK1D-217ENST00000581241 MYO16Q9Y6X6 1858 aa12.5□□□□□ -0.41
CSNK1D-217ENST00000581241 RBFOX2O43251 390 aaKnown RBP eCLIP12.5□□□□□ -0.413e-9■■■■■ 32.5
CSNK1D-217ENST00000581241 PRSS8Q16651 343 aa12.5□□□□□ -0.41
CSNK1D-217ENST00000581241 MMD2Q8IY49 270 aa12.5□□□□□ -0.41
CSNK1D-217ENST00000581241 PEF1Q9UBV8 284 aaKnown RBP12.5□□□□□ -0.41
CSNK1D-217ENST00000581241 R4GN57 208 aa12.5□□□□□ -0.41
CSNK1D-217ENST00000581241 C7orf71A4D174 169 aa12.5□□□□□ -0.41
CSNK1D-217ENST00000581241 CRYBB3P26998 211 aa12.5□□□□□ -0.41
CSNK1D-217ENST00000581241 ZP1P60852 638 aa12.5□□□□□ -0.41
CSNK1D-217ENST00000581241 PSMG3Q9BT73 122 aaPredicted RBP12.5□□□□□ -0.41
CSNK1D-217ENST00000581241 NPBWR2P48146 333 aa12.5□□□□□ -0.41
CSNK1D-217ENST00000581241 C1orf185Q5T7R7 199 aa12.5□□□□□ -0.41
CSNK1D-217ENST00000581241 EBLN2Q6P2I7 272 aa12.5□□□□□ -0.41
CSNK1D-217ENST00000581241 LHFPL6Q9Y693 200 aa12.5□□□□□ -0.41
CSNK1D-217ENST00000581241 NEU1Q99519 415 aa12.5□□□□□ -0.41
CSNK1D-217ENST00000581241 AUP1Q9Y679 476 aa12.5□□□□□ -0.41
CSNK1D-217ENST00000581241 NPIPB6E9PJ23 425 aa12.5□□□□□ -0.41
CSNK1D-217ENST00000581241 VENTXO95231 258 aa12.5□□□□□ -0.41
CSNK1D-217ENST00000581241 PLAUP00749 431 aa12.5□□□□□ -0.41
CSNK1D-217ENST00000581241 CTAG1AP78358 180 aa12.5□□□□□ -0.41
CSNK1D-217ENST00000581241 ATOH7Q8N100 152 aa12.5□□□□□ -0.41
CSNK1D-217ENST00000581241 DLL3Q9NYJ7 618 aa12.5□□□□□ -0.41
CSNK1D-217ENST00000581241 SLC25A17O43808 307 aa12.49□□□□□ -0.41
CSNK1D-217ENST00000581241 SNRPCP09234 159 aaKnown RBP12.49□□□□□ -0.41
CSNK1D-217ENST00000581241 EMP1P54849 157 aa12.49□□□□□ -0.41
CSNK1D-217ENST00000581241 LAIR2Q6ISS4 152 aa12.49□□□□□ -0.41
CSNK1D-217ENST00000581241 GSN-AS1Q9NRJ2 163 aa12.49□□□□□ -0.41
CSNK1D-217ENST00000581241 FOXJ2Q9P0K8 574 aa12.49□□□□□ -0.41
CSNK1D-217ENST00000581241 CX3CL1P78423 397 aa12.49□□□□□ -0.41
CSNK1D-217ENST00000581241 ZNF600Q6ZNG1 722 aa12.49□□□□□ -0.41
CSNK1D-217ENST00000581241 SDHCQ99643 169 aaPredicted RBP12.49□□□□□ -0.41
CSNK1D-217ENST00000581241 UNC119Q13432 240 aa12.49□□□□□ -0.41
CSNK1D-217ENST00000581241 SRSF12Q8WXF0 261 aaKnown RBP12.49□□□□□ -0.41
CSNK1D-217ENST00000581241 EAF1Q96JC9 268 aaPredicted RBP12.49□□□□□ -0.41
CSNK1D-217ENST00000581241 SFXN3Q9BWM7 321 aa12.49□□□□□ -0.41
CSNK1D-217ENST00000581241 ZNFX1Q9P2E3 1918 aaKnown RBP12.49□□□□□ -0.41
CSNK1D-217ENST00000581241 C2orf83Q53S99 150 aa12.49□□□□□ -0.41
CSNK1D-217ENST00000581241 TRAV30A0A087WSZ9 112 aa12.49□□□□□ -0.41
CSNK1D-217ENST00000581241 C16orf97H3BN30 126 aa12.49□□□□□ -0.41
CSNK1D-217ENST00000581241 MPV17P39210 176 aa12.49□□□□□ -0.41
CSNK1D-217ENST00000581241 RAXQ9Y2V3 346 aa12.49□□□□□ -0.41
CSNK1D-217ENST00000581241 TUBGCP6Q96RT7 1819 aa12.49□□□□□ -0.41
CSNK1D-217ENST00000581241 NPIPB7O75200 414 aa12.48□□□□□ -0.41
CSNK1D-217ENST00000581241 S1PR2O95136 353 aa12.48□□□□□ -0.41
CSNK1D-217ENST00000581241 DLX6P56179 175 aa12.48□□□□□ -0.41
CSNK1D-217ENST00000581241 A0A1W2PS18 150 aa12.48□□□□□ -0.41
CSNK1D-217ENST00000581241 ZNF708P17019 499 aa12.48□□□□□ -0.41
CSNK1D-217ENST00000581241 GCHFRP30047 84 aa12.48□□□□□ -0.41
CSNK1D-217ENST00000581241 HCP5Q6MZN7 132 aa12.48□□□□□ -0.41
CSNK1D-217ENST00000581241 A1L4Q6 167 aa12.48□□□□□ -0.41
CSNK1D-217ENST00000581241 C17orf51A8MQB3 221 aa12.48□□□□□ -0.41
CSNK1D-217ENST00000581241 IL4P05112 153 aa12.48□□□□□ -0.41
CSNK1D-217ENST00000581241 FHITP49789 147 aa12.48□□□□□ -0.41
CSNK1D-217ENST00000581241 HSPE1P61604 102 aaKnown RBP12.48□□□□□ -0.41
CSNK1D-217ENST00000581241 ZNF146Q15072 292 aa12.48□□□□□ -0.41
CSNK1D-217ENST00000581241 ZNF441Q8N8Z8 693 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms