RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 LY6LH3BQJ8 138 aa12.53□□□□□ -0.4
SS18-216ENST00000580751 CLDN34H7C241 214 aa12.53□□□□□ -0.4
SS18-216ENST00000580751 HOXA3O43365 443 aaPredicted RBP12.53□□□□□ -0.4
SS18-216ENST00000580751 OR4E1P0C645 316 aa12.53□□□□□ -0.4
SS18-216ENST00000580751 OR8U9P0C7N5 309 aa12.53□□□□□ -0.4
SS18-216ENST00000580751 ANXA3P12429 323 aa12.53□□□□□ -0.4
SS18-216ENST00000580751 LRRC75BQ2VPJ9 315 aa12.53□□□□□ -0.4
SS18-216ENST00000580751 CT45A1Q5HYN5 189 aa12.53□□□□□ -0.4
SS18-216ENST00000580751 FAM71F2Q6NXP2 309 aa12.53□□□□□ -0.4
SS18-216ENST00000580751 TMED4Q7Z7H5 227 aa12.53□□□□□ -0.4
SS18-216ENST00000580751 PRIMA1Q86XR5 153 aa12.53□□□□□ -0.4
SS18-216ENST00000580751 TCTEX1D1Q8N7M0 179 aa12.53□□□□□ -0.4
SS18-216ENST00000580751 OR8U1Q8NH10 309 aa12.53□□□□□ -0.4
SS18-216ENST00000580751 OR5R1Q8NH85 324 aa12.53□□□□□ -0.4
SS18-216ENST00000580751 CT45A3Q8NHU0 189 aa12.53□□□□□ -0.4
SS18-216ENST00000580751 SECTM1Q8WVN6 248 aa12.53□□□□□ -0.4
SS18-216ENST00000580751 GALNT14Q96FL9 552 aa12.53□□□□□ -0.4
SS18-216ENST00000580751 SLC2A9Q9NRM0 540 aa12.53□□□□□ -0.4
SS18-216ENST00000580751 KCNIP3Q9Y2W7 256 aa12.53□□□□□ -0.4
SS18-216ENST00000580751 A0A0B4J2A0 478 aa12.52□□□□□ -0.41
SS18-216ENST00000580751 IGKV1D-13A0A0B4J2D9 117 aa12.52□□□□□ -0.41
SS18-216ENST00000580751 RNF212BA8MTL3 300 aa12.52□□□□□ -0.41
SS18-216ENST00000580751 HSD17B6O14756 317 aa12.52□□□□□ -0.41
SS18-216ENST00000580751 RAB29O14966 203 aa12.52□□□□□ -0.41
SS18-216ENST00000580751 SLC31A2O15432 143 aa12.52□□□□□ -0.41
SS18-216ENST00000580751 CREBL2O60519 120 aaPredicted RBP12.52□□□□□ -0.41
SS18-216ENST00000580751 IGKV1-13P0DP09 117 aa12.52□□□□□ -0.41
SS18-216ENST00000580751 ANXA7P20073 488 aaKnown RBP12.52□□□□□ -0.41
SS18-216ENST00000580751 IER3P46695 156 aa12.52□□□□□ -0.41
SS18-216ENST00000580751 ZNF134P52741 427 aa12.52□□□□□ -0.41
SS18-216ENST00000580751 ZNF137PP52743 207 aa12.52□□□□□ -0.41
SS18-216ENST00000580751 PIGPP57054 158 aa12.52□□□□□ -0.41
SS18-216ENST00000580751 SLC9A3R2Q15599 337 aa12.52□□□□□ -0.41
SS18-216ENST00000580751 SGPP2Q8IWX5 399 aa12.52□□□□□ -0.41
SS18-216ENST00000580751 DYNAPQ8N1N2 210 aa12.52□□□□□ -0.41
SS18-216ENST00000580751 RTN4IP1Q8WWV3 396 aaPredicted RBP12.52□□□□□ -0.41
SS18-216ENST00000580751 ESM1Q9NQ30 184 aa12.52□□□□□ -0.41
SS18-216ENST00000580751 FAM212BQ9NTI7 297 aaPredicted RBP12.52□□□□□ -0.41
SS18-216ENST00000580751 SHPKQ9UHJ6 478 aa12.52□□□□□ -0.41
SS18-216ENST00000580751 ZNF221Q9UK13 617 aa12.52□□□□□ -0.41
SS18-216ENST00000580751 CRYM-AS1A6NIL9 109 aa12.51□□□□□ -0.41
SS18-216ENST00000580751 TRIM77I1YAP6 450 aa12.51□□□□□ -0.41
SS18-216ENST00000580751 TXNL1O43396 289 aa12.51□□□□□ -0.41
SS18-216ENST00000580751 VENTXO95231 258 aa12.51□□□□□ -0.41
SS18-216ENST00000580751 DUS4LO95620 317 aaKnown RBP12.51□□□□□ -0.41
SS18-216ENST00000580751 IGHV4-59P01825 116 aa12.51□□□□□ -0.41
SS18-216ENST00000580751 TRAPPC2P0DI81 140 aa12.51□□□□□ -0.41
SS18-216ENST00000580751 TRAPPC2BP0DI82 140 aa12.51□□□□□ -0.41
SS18-216ENST00000580751 BRS3P32247 399 aa12.51□□□□□ -0.41
SS18-216ENST00000580751 DYNLT3P51808 116 aa12.51□□□□□ -0.41
SS18-216ENST00000580751 C4orf46Q504U0 113 aa12.51□□□□□ -0.41
SS18-216ENST00000580751 ZNF66Q6ZN08 573 aa12.51□□□□□ -0.41
SS18-216ENST00000580751 LYG2Q86SG7 212 aa12.51□□□□□ -0.41
SS18-216ENST00000580751 LYG1Q8N1E2 194 aa12.51□□□□□ -0.41
SS18-216ENST00000580751 ZNF431Q8TF32 576 aaPredicted RBP12.51□□□□□ -0.41
SS18-216ENST00000580751 CHAC2Q8WUX2 184 aa12.51□□□□□ -0.41
SS18-216ENST00000580751 HSD17B10Q99714 261 aaKnown RBP12.51□□□□□ -0.41
SS18-216ENST00000580751 SSX3Q99909 188 aa12.51□□□□□ -0.41
SS18-216ENST00000580751 IFI27L2Q9H2X8 130 aa12.51□□□□□ -0.41
SS18-216ENST00000580751 CCL28Q9NRJ3 127 aa12.51□□□□□ -0.41
SS18-216ENST00000580751 C9orf170A2RU37 121 aa12.5□□□□□ -0.41
SS18-216ENST00000580751 H3BUX3 64 aa12.5□□□□□ -0.41
SS18-216ENST00000580751 MPPED1O15442 326 aa12.5□□□□□ -0.41
SS18-216ENST00000580751 ST8SIA5O15466 376 aa12.5□□□□□ -0.41
SS18-216ENST00000580751 SFT2D2O95562 160 aa12.5□□□□□ -0.41
SS18-216ENST00000580751 IGLV2-14P01704 120 aa12.5□□□□□ -0.41
SS18-216ENST00000580751 GAPDHP04406 335 aaKnown RBP12.5□□□□□ -0.41
SS18-216ENST00000580751 VSIG10L2P0DP72 767 aa12.5□□□□□ -0.41
SS18-216ENST00000580751 AKR1C4P17516 323 aa12.5□□□□□ -0.41
SS18-216ENST00000580751 PAX6P26367 422 aa12.5□□□□□ -0.41
SS18-216ENST00000580751 GPR12P47775 334 aa12.5□□□□□ -0.41
SS18-216ENST00000580751 RAB25P57735 213 aa12.5□□□□□ -0.41
SS18-216ENST00000580751 UBA52P62987 128 aaKnown RBP12.5□□□□□ -0.41
SS18-216ENST00000580751 SRPXP78539 464 aa12.5□□□□□ -0.41
SS18-216ENST00000580751 ZNF816Q0VGE8 651 aaPredicted RBP12.5□□□□□ -0.41
SS18-216ENST00000580751 DHRS2Q13268 280 aa12.5□□□□□ -0.41
SS18-216ENST00000580751 ZNF818PQ6ZRF7 136 aa12.5□□□□□ -0.41
SS18-216ENST00000580751 OR8H3Q8N146 312 aa12.5□□□□□ -0.41
SS18-216ENST00000580751 DRAM1Q8N682 238 aa12.5□□□□□ -0.41
SS18-216ENST00000580751 MITD1Q8WV92 249 aa12.5□□□□□ -0.41
SS18-216ENST00000580751 ST6GALNAC6Q969X2 333 aa12.5□□□□□ -0.41
SS18-216ENST00000580751 TMEM230Q96A57 120 aa12.5□□□□□ -0.41
SS18-216ENST00000580751 ADTRPQ96IZ2 230 aa12.5□□□□□ -0.41
SS18-216ENST00000580751 S1PR3Q99500 378 aa12.5□□□□□ -0.41
SS18-216ENST00000580751 PARP12Q9H0J9 701 aaKnown RBP12.5□□□□□ -0.41
SS18-216ENST00000580751 OR2D2Q9H210 308 aa12.5□□□□□ -0.41
SS18-216ENST00000580751 NAA60Q9H7X0 242 aa12.5□□□□□ -0.41
SS18-216ENST00000580751 VPREB3Q9UKI3 123 aa12.5□□□□□ -0.41
SS18-216ENST00000580751 ALG5Q9Y673 324 aa12.5□□□□□ -0.41
SS18-216ENST00000580751 A0A0B4J293 547 aa12.49□□□□□ -0.41
SS18-216ENST00000580751 TEX13DA0A0J9YY54 714 aaPredicted RBP12.49□□□□□ -0.41
SS18-216ENST00000580751 PGLYRP1O75594 196 aaPredicted RBP12.49□□□□□ -0.41
SS18-216ENST00000580751 HLA-AP01891 365 aaKnown RBP12.49□□□□□ -0.41
SS18-216ENST00000580751 RNASE1P07998 156 aaKnown RBP12.49□□□□□ -0.41
SS18-216ENST00000580751 F2RP25116 425 aa12.49□□□□□ -0.41
SS18-216ENST00000580751 TAGLNQ01995 201 aaKnown RBP12.49□□□□□ -0.41
SS18-216ENST00000580751 CATR1Q13166 79 aa12.49□□□□□ -0.41
SS18-216ENST00000580751 TGIF2LXQ8IUE1 241 aa12.49□□□□□ -0.41
SS18-216ENST00000580751 ADAD2Q8NCV1 583 aaKnown RBP12.49□□□□□ -0.41
SS18-216ENST00000580751 COQ8AQ8NI60 647 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms