RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 OR2W1Q9Y3N9 320 aa10.56□□□□□ -0.72
CDK5RAP3-217ENST00000580287 WIPI2Q9Y4P8 454 aa10.56□□□□□ -0.72
CDK5RAP3-217ENST00000580287 TAAR5O14804 337 aa10.56□□□□□ -0.72
CDK5RAP3-217ENST00000580287 ADAM20O43506 726 aa10.56□□□□□ -0.72
CDK5RAP3-217ENST00000580287 TUSC2O75896 110 aa10.56□□□□□ -0.72
CDK5RAP3-217ENST00000580287 S100GP29377 79 aa10.56□□□□□ -0.72
CDK5RAP3-217ENST00000580287 EIF5AP63241 154 aaKnown RBP10.56□□□□□ -0.72
CDK5RAP3-217ENST00000580287 MZT1Q08AG7 82 aa10.56□□□□□ -0.72
CDK5RAP3-217ENST00000580287 GNMTQ14749 295 aa10.56□□□□□ -0.72
CDK5RAP3-217ENST00000580287 SMIM21Q3B7S5 101 aa10.56□□□□□ -0.72
CDK5RAP3-217ENST00000580287 FAM90A1Q86YD7 464 aa10.56□□□□□ -0.72
CDK5RAP3-217ENST00000580287 C20orf24Q9BUV8 137 aa10.56□□□□□ -0.72
CDK5RAP3-217ENST00000580287 PLEKHA2Q9HB19 425 aa10.56□□□□□ -0.72
CDK5RAP3-217ENST00000580287 RNF7Q9UBF6 113 aa10.56□□□□□ -0.72
CDK5RAP3-217ENST00000580287 TENM4Q6N022 2769 aa10.56□□□□□ -0.72
CDK5RAP3-217ENST00000580287 IGHV2-70P01814 119 aa10.55□□□□□ -0.72
CDK5RAP3-217ENST00000580287 GYPAP02724 150 aa10.55□□□□□ -0.72
CDK5RAP3-217ENST00000580287 MT-ND4LP03901 98 aa10.55□□□□□ -0.72
CDK5RAP3-217ENST00000580287 EPHA1P21709 976 aa10.55□□□□□ -0.72
CDK5RAP3-217ENST00000580287 S100PP25815 95 aa10.55□□□□□ -0.72
CDK5RAP3-217ENST00000580287 GATA4P43694 442 aa10.55□□□□□ -0.72
CDK5RAP3-217ENST00000580287 SULT1A2P50226 295 aa10.55□□□□□ -0.72
CDK5RAP3-217ENST00000580287 DVL1P1P54792 670 aaPredicted RBP10.55□□□□□ -0.72
CDK5RAP3-217ENST00000580287 EDDM3AQ14507 147 aa10.55□□□□□ -0.72
CDK5RAP3-217ENST00000580287 RNASE11Q8TAA1 199 aaKnown RBP10.55□□□□□ -0.72
CDK5RAP3-217ENST00000580287 TCEAL7Q9BRU2 100 aa10.55□□□□□ -0.72
CDK5RAP3-217ENST00000580287 PARP11Q9NR21 331 aa10.55□□□□□ -0.72
CDK5RAP3-217ENST00000580287 LAMP3Q9UQV4 416 aa10.55□□□□□ -0.72
CDK5RAP3-217ENST00000580287 A1L4Q6 167 aa10.55□□□□□ -0.72
CDK5RAP3-217ENST00000580287 CLN5O75503 358 aa10.55□□□□□ -0.72
CDK5RAP3-217ENST00000580287 PGLYRP1O75594 196 aaPredicted RBP10.55□□□□□ -0.72
CDK5RAP3-217ENST00000580287 OR8U8P0C7N1 319 aa10.55□□□□□ -0.72
CDK5RAP3-217ENST00000580287 MDH2P40926 338 aaKnown RBP10.55□□□□□ -0.72
CDK5RAP3-217ENST00000580287 GLIPR1P48060 266 aa10.55□□□□□ -0.72
CDK5RAP3-217ENST00000580287 EIF5AL1Q6IS14 154 aaKnown RBP10.55□□□□□ -0.72
CDK5RAP3-217ENST00000580287 SELENOHQ8IZQ5 122 aaKnown RBP10.55□□□□□ -0.72
CDK5RAP3-217ENST00000580287 ISOC2Q96AB3 205 aa10.55□□□□□ -0.72
CDK5RAP3-217ENST00000580287 KPTNQ9Y664 436 aa10.55□□□□□ -0.72
CDK5RAP3-217ENST00000580287 FAM24AA6NFZ4 105 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 SSSCA1O60232 199 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 IGHV2-5P01817 119 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 DAOP14920 347 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 NKX2-1P43699 371 aaPredicted RBP10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 MIDNQ504T8 468 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 AWAT1Q58HT5 328 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 CXorf66Q5JRM2 361 aaPredicted RBP10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 ZNF497Q6ZNH5 498 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 ZBTB34Q8NCN2 500 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 CCL13Q99616 98 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 ABHD14AQ9BUJ0 271 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 MS4A5Q9H3V2 200 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 DYSFO75923 2080 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 DOCK11Q5JSL3 2073 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 hCG_1809904A0A1W2PP81 198 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 A0A1W2PR64 198 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 A0A1W2PRV1 198 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 JTBO76095 146 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 SERPINE2P07093 398 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 SNRNP70P08621 437 aaKnown RBP10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 NQO2P16083 231 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 IGFBP2P18065 325 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 COL8A2P25067 703 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 CFHR2P36980 270 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 OR3A1P47881 315 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 EFNB3Q15768 340 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 H1FOOQ8IZA3 346 aaPredicted RBP10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 OR2C3Q8N628 320 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 OR10V1Q8NGI7 309 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 COQ2Q96H96 371 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 SPIN2AQ99865 258 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 SPIN2BQ9BPZ2 258 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 NCOR1P1Q9H4R4 102 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 POMT1Q9Y6A1 747 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 TRBV6-6A0A0A6YYG2 114 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 C7orf77A4D0Y5 90 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 NDUFS7O75251 213 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 TNFRSF1AP19438 455 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 CEACAM6P40199 344 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 RND3P61587 244 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 TMEM217Q8N7C4 229 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 TMEM56Q96MV1 263 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 UBTD1Q9HAC8 227 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 TMEM56-RWDD3S4R434 201 aa10.54□□□□□ -0.72
CDK5RAP3-217ENST00000580287 WRBO00258 174 aa10.53□□□□□ -0.72
CDK5RAP3-217ENST00000580287 GPR137BO60478 399 aa10.53□□□□□ -0.72
CDK5RAP3-217ENST00000580287 NDUFS6O75380 124 aaKnown RBP10.53□□□□□ -0.72
CDK5RAP3-217ENST00000580287 CST7O76096 145 aa10.53□□□□□ -0.72
CDK5RAP3-217ENST00000580287 CDS2O95674 445 aa10.53□□□□□ -0.72
CDK5RAP3-217ENST00000580287 RAB5AP20339 215 aa10.53□□□□□ -0.72
CDK5RAP3-217ENST00000580287 F2RP25116 425 aa10.53□□□□□ -0.72
CDK5RAP3-217ENST00000580287 LMO1P25800 156 aa10.53□□□□□ -0.72
CDK5RAP3-217ENST00000580287 VAMP2P63027 116 aa10.53□□□□□ -0.72
CDK5RAP3-217ENST00000580287 ZNF880Q6PDB4 577 aa10.53□□□□□ -0.72
CDK5RAP3-217ENST00000580287 MOB1BQ7L9L4 216 aa10.53□□□□□ -0.72
CDK5RAP3-217ENST00000580287 FAM216BQ8N7L0 139 aa10.53□□□□□ -0.72
CDK5RAP3-217ENST00000580287 OR4D5Q8NGN0 318 aa10.53□□□□□ -0.72
CDK5RAP3-217ENST00000580287 DSCAMO60469 2012 aa10.53□□□□□ -0.72
CDK5RAP3-217ENST00000580287 USP9YO00507 2555 aaPredicted RBP10.53□□□□□ -0.72
CDK5RAP3-217ENST00000580287 H3BP45 60 aa10.53□□□□□ -0.72
CDK5RAP3-217ENST00000580287 ZNF737O75373 536 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms