RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	LIPK	Q5VXJ0	399 aa		4.28	□□□□□ -1.72
KPNB1-209	ENST00000580158	GLT8D1	Q68CQ7	371 aa		4.28	□□□□□ -1.72
KPNB1-209	ENST00000580158	APRG1	Q8IVJ8	170 aa		4.28	□□□□□ -1.72
KPNB1-209	ENST00000580158	SERPINA12	Q8IW75	414 aa		4.28	□□□□□ -1.72
KPNB1-209	ENST00000580158	OR5D18	Q8NGL1	313 aa		4.28	□□□□□ -1.72
KPNB1-209	ENST00000580158	OR8D4	Q8NGM9	314 aa		4.28	□□□□□ -1.72
KPNB1-209	ENST00000580158	OR1L1	Q8NH94	360 aa		4.28	□□□□□ -1.72
KPNB1-209	ENST00000580158	NEK7	Q8TDX7	302 aa		4.28	□□□□□ -1.72
KPNB1-209	ENST00000580158	SPSB1	Q96BD6	273 aa		4.28	□□□□□ -1.72
KPNB1-209	ENST00000580158	OPALIN	Q96PE5	141 aa		4.28	□□□□□ -1.72
KPNB1-209	ENST00000580158	TSNAX	Q99598	290 aa	Known RBP	4.28	□□□□□ -1.72
KPNB1-209	ENST00000580158	ABHD14A	Q9BUJ0	271 aa		4.28	□□□□□ -1.72
KPNB1-209	ENST00000580158	C5orf66	Q9H5L9	145 aa		4.28	□□□□□ -1.72
KPNB1-209	ENST00000580158	AKIP1	Q9NQ31	210 aa		4.28	□□□□□ -1.72
KPNB1-209	ENST00000580158	RCC2	Q9P258	522 aa	Known RBP	4.28	□□□□□ -1.72
KPNB1-209	ENST00000580158	ZNF230	Q9UIE0	474 aa	Predicted RBP	4.28	□□□□□ -1.72
KPNB1-209	ENST00000580158		R4GMQ9	66 aa		4.28	□□□□□ -1.72
KPNB1-209	ENST00000580158		A8MWP6	167 aa		4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	AIP	O00170	330 aa		4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	MRAS	O14807	208 aa		4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	ARPC2	O15144	300 aa		4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	MPPED1	O15442	326 aa		4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	SULT1B1	O43704	296 aa		4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	MRPS14	O60783	128 aa	Known RBP	4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	SRSF10	O75494	262 aa	Known RBP	4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	SPDEF	O95238	335 aa		4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	HLA-A	P01891	365 aa	Known RBP	4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	GSTT2	P0CG29	244 aa		4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	GSTT2B	P0CG30	244 aa		4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	MYOD1	P15172	320 aa		4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	GCSH	P23434	173 aa		4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	RRM2	P31350	389 aa		4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	LIPE	Q05469	1076 aa		4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	IL13RA2	Q14627	380 aa		4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	PSG5	Q15238	335 aa		4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	MORN2	Q502X0	79 aa		4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	SLC35D3	Q5M8T2	416 aa		4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	C6orf183	Q5T699	404 aa		4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	ZNF691	Q5VV52	312 aa		4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	ZNF833P	Q6ZTB9	187 aa		4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	ODF3L1	Q8IXM7	274 aa		4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	STX19	Q8N4C7	294 aa		4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	SUMF2	Q8NBJ7	301 aa		4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	DEFB104A	Q8WTQ1	72 aa		4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	MCUR1	Q96AQ8	359 aa		4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	C7orf34	Q96L11	122 aa		4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	C16orf45	Q96MC5	204 aa	Predicted RBP	4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	CNN2	Q99439	309 aa	Known RBP	4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	SULT4A1	Q9BR01	284 aa		4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	DPCD	Q9BVM2	203 aa	Predicted RBP	4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	YTHDF1	Q9BYJ9	559 aa	Known RBP	4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	TTTY10	Q9BZA0	68 aa		4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	OR2S2	Q9NQN1	319 aa		4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	ARMC1	Q9NVT9	282 aa		4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	PPP1R14D	Q9NXH3	145 aa		4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	SAMD4A	Q9UPU9	718 aa	Known RBP	4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	WASHC3	Q9Y3C0	194 aa		4.27	□□□□□ -1.73
KPNB1-209	ENST00000580158	IGKV1-9	A0A0C4DH69	117 aa		4.26	□□□□□ -1.73
KPNB1-209	ENST00000580158		A0A1B0GW64	132 aa		4.26	□□□□□ -1.73
KPNB1-209	ENST00000580158	FAM90A7P	A6NKC0	464 aa		4.26	□□□□□ -1.73
KPNB1-209	ENST00000580158	C15orf61	A6NNL5	157 aa		4.26	□□□□□ -1.73
KPNB1-209	ENST00000580158	FAM90A23P	A8MXZ1	464 aa		4.26	□□□□□ -1.73
KPNB1-209	ENST00000580158	FXYD1	O00168	92 aa		4.26	□□□□□ -1.73
KPNB1-209	ENST00000580158	S1PR2	O95136	353 aa		4.26	□□□□□ -1.73
KPNB1-209	ENST00000580158	OR9G9	P0C7N8	305 aa		4.26	□□□□□ -1.73
KPNB1-209	ENST00000580158	APELA	P0DMC3	54 aa		4.26	□□□□□ -1.73
KPNB1-209	ENST00000580158	MAGEA2	P43356	314 aa		4.26	□□□□□ -1.73
KPNB1-209	ENST00000580158	TMEM41B	Q5BJD5	291 aa		4.26	□□□□□ -1.73
KPNB1-209	ENST00000580158	COQ5	Q5HYK3	327 aa		4.26	□□□□□ -1.73
KPNB1-209	ENST00000580158	FAM71F2	Q6NXP2	309 aa		4.26	□□□□□ -1.73
KPNB1-209	ENST00000580158	TRAT1	Q6PIZ9	186 aa		4.26	□□□□□ -1.73
KPNB1-209	ENST00000580158	UTS2B	Q765I0	119 aa		4.26	□□□□□ -1.73
KPNB1-209	ENST00000580158	BBS1	Q8NFJ9	593 aa		4.26	□□□□□ -1.73
KPNB1-209	ENST00000580158	TEX47	Q8TBZ9	253 aa		4.26	□□□□□ -1.73
KPNB1-209	ENST00000580158	ST8SIA2	Q92186	375 aa		4.26	□□□□□ -1.73
KPNB1-209	ENST00000580158	FAM46B	Q96A09	425 aa		4.26	□□□□□ -1.73
KPNB1-209	ENST00000580158	APOL4	Q9BPW4	351 aa		4.26	□□□□□ -1.73
KPNB1-209	ENST00000580158	SCRT1	Q9BWW7	348 aa		4.26	□□□□□ -1.73
KPNB1-209	ENST00000580158	ARGLU1	Q9NWB6	273 aa	Predicted RBP	4.26	□□□□□ -1.73
KPNB1-209	ENST00000580158	NKIRAS1	Q9NYS0	192 aa		4.26	□□□□□ -1.73
KPNB1-209	ENST00000580158	PIPOX	Q9P0Z9	390 aa		4.26	□□□□□ -1.73
KPNB1-209	ENST00000580158	TRAPPC2L	Q9UL33	140 aa		4.26	□□□□□ -1.73
KPNB1-209	ENST00000580158	UFC1	Q9Y3C8	167 aa		4.26	□□□□□ -1.73
KPNB1-209	ENST00000580158	VPS13B	Q7Z7G8	4022 aa		4.26	□□□□□ -1.73
KPNB1-209	ENST00000580158	SAA2-SAA4	A0A096LPE2	208 aa		4.25	□□□□□ -1.73
KPNB1-209	ENST00000580158	BBIP1	A8MTZ0	92 aa		4.25	□□□□□ -1.73
KPNB1-209	ENST00000580158		F5H697	171 aa		4.25	□□□□□ -1.73
KPNB1-209	ENST00000580158	GMNN	O75496	209 aa		4.25	□□□□□ -1.73
KPNB1-209	ENST00000580158	RBMXL2	O75526	392 aa	Known RBP	4.25	□□□□□ -1.73
KPNB1-209	ENST00000580158	OR7C1	O76099	320 aa	Predicted RBP	4.25	□□□□□ -1.73
KPNB1-209	ENST00000580158	RPP14	O95059	124 aa	Known RBP	4.25	□□□□□ -1.73
KPNB1-209	ENST00000580158	SOX14	O95416	240 aa		4.25	□□□□□ -1.73
KPNB1-209	ENST00000580158	HBZ	P02008	142 aa		4.25	□□□□□ -1.73
KPNB1-209	ENST00000580158	MRPL3	P09001	348 aa	Known RBP	4.25	□□□□□ -1.73
KPNB1-209	ENST00000580158	SAA2	P0DJI9	122 aa	Predicted RBP	4.25	□□□□□ -1.73
KPNB1-209	ENST00000580158	C8orf88	P0DMB2	117 aa		4.25	□□□□□ -1.73
KPNB1-209	ENST00000580158	GAL	P22466	123 aa		4.25	□□□□□ -1.73
KPNB1-209	ENST00000580158	ELL	P55199	621 aa	Predicted RBP	4.25	□□□□□ -1.73
KPNB1-209	ENST00000580158	TIRAP	P58753	221 aa		4.25	□□□□□ -1.73
KPNB1-209	ENST00000580158	CXCR4	P61073	352 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms