RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 KLF17Q5JT82 389 aaPredicted RBP3.18□□□□□ -1.9
NUP88-213ENST00000576862 TPTE2P1Q5T6R2 138 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 TOMM20LQ6UXN7 152 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 GALNT10Q86SR1 603 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 OR9A2Q8NGT5 310 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 OR51Q1Q8NH59 317 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 KLK6Q92876 244 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 TMEM159Q96B96 161 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 DDIT4LQ96D03 193 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 ZMYND19Q96E35 227 aaPredicted RBP3.18□□□□□ -1.9
NUP88-213ENST00000576862 CPNE2Q96FN4 548 aaPredicted RBP3.18□□□□□ -1.9
NUP88-213ENST00000576862 MRAP2Q96G30 205 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 PYURFQ96I23 114 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 TEX37Q96LM6 180 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 MS4A4EQ96PG1 132 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 SIGMAR1Q99720 223 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 C1orf50Q9BV19 199 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 OSBPL11Q9BXB4 747 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 ACTR6Q9GZN1 396 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 REEP1Q9H902 201 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 EXOSC4Q9NPD3 245 aaKnown RBP3.18□□□□□ -1.9
NUP88-213ENST00000576862 FBXL12Q9NXK8 326 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 RASL12Q9NYN1 266 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 OPTCQ9UBM4 332 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 SLC23A2Q9UGH3 650 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 CES1P1Q9UKY3 287 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 PRELID3BQ9Y3B1 194 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 ASB4Q9Y574 426 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 ALG5Q9Y673 324 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 NUP205Q92621 2012 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 F5P12259 2224 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 TRANK1O15050 2925 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 MYO18AQ92614 2054 aaKnown RBP3.17□□□□□ -1.9
NUP88-213ENST00000576862 A0A087WUJ7 227 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 FAM25AB3EWG3 89 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 FAM25CB3EWG5 89 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 FAM25GB3EWG6 89 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 SMKR1H3BMG3 65 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 GABRPO00591 440 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 MRASO14807 208 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 MBTPS2O43462 519 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 PDE6DO43924 150 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 TPST1O60507 370 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 FKBP6O75344 327 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 OR7C1O76099 320 aaPredicted RBP3.17□□□□□ -1.9
NUP88-213ENST00000576862 HPRT1P00492 218 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 PDYNP01213 254 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 CRYGDP07320 174 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 GPX2P18283 190 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 RAB3AP20336 220 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 GZMHP20718 246 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 IMPA1P29218 277 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 PTGDSP41222 190 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 AKR1C3P42330 323 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 LHX2P50458 406 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 FABP6P51161 128 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 ZNF121P58317 390 aaPredicted RBP3.17□□□□□ -1.9
NUP88-213ENST00000576862 ARG2P78540 354 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 EMX2Q04743 252 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 BAMBIQ13145 260 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 SMIM21Q3B7S5 101 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 AGTRAPQ6RW13 159 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 TMEM205Q6UW68 189 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 Q6ZS52 159 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 PRSS41Q7RTY9 318 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 CBLN2Q8IUK8 224 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 KRTCAP2Q8N6L1 136 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 OR13G1Q8NGZ3 307 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 OR2G2Q8NGZ5 317 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 ZFAND1Q8TCF1 268 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 ASB13Q8WXK3 278 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 TAMM41Q96BW9 452 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 OR4K3Q96R72 315 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 MS4A8Q9BY19 250 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 MS4A6AQ9H2W1 248 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 KCNJ16Q9NPI9 418 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 COA4Q9NYJ1 87 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 CCDC167Q9P0B6 97 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 POMPQ9Y244 141 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 SLC35A3Q9Y2D2 325 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 ZNF638Q14966 1978 aaKnown RBP3.17□□□□□ -1.9
NUP88-213ENST00000576862 DOCK4Q8N1I0 1966 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 CHD5Q8TDI0 1954 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 NOTCH2Q04721 2471 aa3.17□□□□□ -1.9
NUP88-213ENST00000576862 LAMA2P24043 3122 aaKnown RBP3.17□□□□□ -1.9
NUP88-213ENST00000576862 MUC22E2RYF6 1773 aaPredicted RBP3.16□□□□□ -1.9
NUP88-213ENST00000576862 TGIF2-C20orf24A0A0A6YYL0 155 aa3.16□□□□□ -1.9
NUP88-213ENST00000576862 A0A1W2PP18 115 aa3.16□□□□□ -1.9
NUP88-213ENST00000576862 ISPDA4D126 451 aa3.16□□□□□ -1.9
NUP88-213ENST00000576862 A6NDX4 124 aa3.16□□□□□ -1.9
NUP88-213ENST00000576862 BBIP1A8MTZ0 92 aa3.16□□□□□ -1.9
NUP88-213ENST00000576862 C10orf142B7Z368 130 aa3.16□□□□□ -1.9
NUP88-213ENST00000576862 E7EQ34 232 aa3.16□□□□□ -1.9
NUP88-213ENST00000576862 LOC110117498-PIK3R3F6TDL0 507 aa3.16□□□□□ -1.9
NUP88-213ENST00000576862 K7EMT4 169 aa3.16□□□□□ -1.9
NUP88-213ENST00000576862 NME4O00746 187 aa3.16□□□□□ -1.9
NUP88-213ENST00000576862 FOXH1O75593 365 aa3.16□□□□□ -1.9
NUP88-213ENST00000576862 OR2J2O76002 312 aa3.16□□□□□ -1.9
NUP88-213ENST00000576862 ARG1P05089 322 aa3.16□□□□□ -1.9
NUP88-213ENST00000576862 SERPINA7P05543 415 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms