RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 KIR2DS1Q14954 304 aa7.51□□□□□ -1.21
NPLOC4-219ENST00000576713 RNASE12Q5GAN4 147 aaKnown RBP7.51□□□□□ -1.21
NPLOC4-219ENST00000576713 HOGA1Q86XE5 327 aa7.51□□□□□ -1.21
NPLOC4-219ENST00000576713 TGIF2LXQ8IUE1 241 aa7.51□□□□□ -1.21
NPLOC4-219ENST00000576713 SNX29P2Q8IUI4 249 aa7.51□□□□□ -1.21
NPLOC4-219ENST00000576713 H1FOOQ8IZA3 346 aaPredicted RBP7.51□□□□□ -1.21
NPLOC4-219ENST00000576713 OR8U1Q8NH10 309 aa7.51□□□□□ -1.21
NPLOC4-219ENST00000576713 ACOT12Q8WYK0 555 aa7.51□□□□□ -1.21
NPLOC4-219ENST00000576713 RBM14Q96PK6 669 aaKnown RBP7.51□□□□□ -1.21
NPLOC4-219ENST00000576713 ABHD1Q96SE0 405 aa7.51□□□□□ -1.21
NPLOC4-219ENST00000576713 BCL7BQ9BQE9 202 aa7.51□□□□□ -1.21
NPLOC4-219ENST00000576713 RAB9BQ9NP90 201 aa7.51□□□□□ -1.21
NPLOC4-219ENST00000576713 DIABLOQ9NR28 239 aa7.51□□□□□ -1.21
NPLOC4-219ENST00000576713 MGAT4AQ9UM21 535 aa7.51□□□□□ -1.21
NPLOC4-219ENST00000576713 MEGF8Q7Z7M0 2845 aa7.51□□□□□ -1.21
NPLOC4-219ENST00000576713 CLPSL1A2RUU4 121 aa7.5□□□□□ -1.21
NPLOC4-219ENST00000576713 LINC01548A6NM66 108 aa7.5□□□□□ -1.21
NPLOC4-219ENST00000576713 ITGB1BP1O14713 200 aa7.5□□□□□ -1.21
NPLOC4-219ENST00000576713 RGS11O94810 467 aa7.5□□□□□ -1.21
NPLOC4-219ENST00000576713 CRYBA1P05813 215 aa7.5□□□□□ -1.21
NPLOC4-219ENST00000576713 TMEM11P17152 192 aa7.5□□□□□ -1.21
NPLOC4-219ENST00000576713 BRS3P32247 399 aa7.5□□□□□ -1.21
NPLOC4-219ENST00000576713 MNDAP41218 407 aa7.5□□□□□ -1.21
NPLOC4-219ENST00000576713 PITPNAQ00169 270 aa7.5□□□□□ -1.21
NPLOC4-219ENST00000576713 FOXL1Q12952 345 aa7.5□□□□□ -1.21
NPLOC4-219ENST00000576713 ARL6IP1Q15041 203 aa7.5□□□□□ -1.21
NPLOC4-219ENST00000576713 ABCA11PQ4W5N1 156 aa7.5□□□□□ -1.21
NPLOC4-219ENST00000576713 CCDC144NLQ6NUI1 221 aa7.5□□□□□ -1.21
NPLOC4-219ENST00000576713 C10orf99Q6UWK7 81 aa7.5□□□□□ -1.21
NPLOC4-219ENST00000576713 FAM131AQ6UXB0 335 aa7.5□□□□□ -1.21
NPLOC4-219ENST00000576713 Q8N2B8 174 aa7.5□□□□□ -1.21
NPLOC4-219ENST00000576713 C5orf56Q8N8D9 126 aa7.5□□□□□ -1.21
NPLOC4-219ENST00000576713 ZNF383Q8NA42 475 aa7.5□□□□□ -1.21
NPLOC4-219ENST00000576713 BEST4Q8NFU0 473 aa7.5□□□□□ -1.21
NPLOC4-219ENST00000576713 OR4F5Q8NH21 305 aa7.5□□□□□ -1.21
NPLOC4-219ENST00000576713 OR10J5Q8NHC4 309 aa7.5□□□□□ -1.21
NPLOC4-219ENST00000576713 GPX8Q8TED1 209 aa7.5□□□□□ -1.21
NPLOC4-219ENST00000576713 WIPF2Q8TF74 440 aaPredicted RBP7.5□□□□□ -1.21
NPLOC4-219ENST00000576713 GPHA2Q96T91 129 aa7.5□□□□□ -1.21
NPLOC4-219ENST00000576713 KRTAP4-12Q9BQ66 201 aa7.5□□□□□ -1.21
NPLOC4-219ENST00000576713 NXF2Q9GZY0 626 aaKnown RBP7.5□□□□□ -1.21
NPLOC4-219ENST00000576713 OR2D2Q9H210 308 aa7.5□□□□□ -1.21
NPLOC4-219ENST00000576713 SDHAF2Q9NX18 166 aa7.5□□□□□ -1.21
NPLOC4-219ENST00000576713 CCDC59Q9P031 241 aaKnown RBP7.5□□□□□ -1.21
NPLOC4-219ENST00000576713 EXTL2Q9UBQ6 330 aa7.5□□□□□ -1.21
NPLOC4-219ENST00000576713 MRPS7Q9Y2R9 242 aaKnown RBP7.5□□□□□ -1.21
NPLOC4-219ENST00000576713 MMP24Q9Y5R2 645 aa7.5□□□□□ -1.21
NPLOC4-219ENST00000576713 DPPA5A6NC42 116 aa7.49□□□□□ -1.21
NPLOC4-219ENST00000576713 RAB29O14966 203 aa7.49□□□□□ -1.21
NPLOC4-219ENST00000576713 TUSC2O75896 110 aa7.49□□□□□ -1.21
NPLOC4-219ENST00000576713 FAM106CPP0CH98 169 aa7.49□□□□□ -1.21
NPLOC4-219ENST00000576713 IL3RAP26951 378 aa7.49□□□□□ -1.21
NPLOC4-219ENST00000576713 CD1BP29016 333 aa7.49□□□□□ -1.21
NPLOC4-219ENST00000576713 HES1Q14469 280 aa7.49□□□□□ -1.21
NPLOC4-219ENST00000576713 CNIH2Q6PI25 160 aa7.49□□□□□ -1.21
NPLOC4-219ENST00000576713 C11orf88Q6PI97 169 aa7.49□□□□□ -1.21
NPLOC4-219ENST00000576713 Q8N9W7 124 aa7.49□□□□□ -1.21
NPLOC4-219ENST00000576713 PHF21AQ96BD5 680 aa7.49□□□□□ -1.21
NPLOC4-219ENST00000576713 CMTM3Q96MX0 182 aa7.49□□□□□ -1.21
NPLOC4-219ENST00000576713 DCUN1D5Q9BTE7 237 aa7.49□□□□□ -1.21
NPLOC4-219ENST00000576713 ZNF747Q9BV97 191 aa7.49□□□□□ -1.21
NPLOC4-219ENST00000576713 BEX1Q9HBH7 125 aa7.49□□□□□ -1.21
NPLOC4-219ENST00000576713 PITPNC1Q9UKF7 332 aa7.49□□□□□ -1.21
NPLOC4-219ENST00000576713 LINC00473A8K010 186 aa7.48□□□□□ -1.21
NPLOC4-219ENST00000576713 FAM25AB3EWG3 89 aa7.48□□□□□ -1.21
NPLOC4-219ENST00000576713 FAM25CB3EWG5 89 aa7.48□□□□□ -1.21
NPLOC4-219ENST00000576713 FAM25GB3EWG6 89 aa7.48□□□□□ -1.21
NPLOC4-219ENST00000576713 H0YJW9 148 aa7.48□□□□□ -1.21
NPLOC4-219ENST00000576713 M0R1X1 148 aa7.48□□□□□ -1.21
NPLOC4-219ENST00000576713 DIRAS3O95661 229 aa7.48□□□□□ -1.21
NPLOC4-219ENST00000576713 PMP2P02689 132 aa7.48□□□□□ -1.21
NPLOC4-219ENST00000576713 IGKV1-16P04430 117 aa7.48□□□□□ -1.21
NPLOC4-219ENST00000576713 VSIG10L2P0DP72 767 aa7.48□□□□□ -1.21
NPLOC4-219ENST00000576713 AADACP22760 399 aa7.48□□□□□ -1.21
NPLOC4-219ENST00000576713 PRSS3P35030 304 aa7.48□□□□□ -1.21
NPLOC4-219ENST00000576713 RFX2P48378 723 aa7.48□□□□□ -1.21
NPLOC4-219ENST00000576713 BRWD1-AS2P59051 145 aa7.48□□□□□ -1.21
NPLOC4-219ENST00000576713 RPL30P62888 115 aaKnown RBP7.48□□□□□ -1.21
NPLOC4-219ENST00000576713 DGCR2P98153 550 aa7.48□□□□□ -1.21
NPLOC4-219ENST00000576713 EIF4EBP1Q13541 118 aaPredicted RBP7.48□□□□□ -1.21
NPLOC4-219ENST00000576713 GAGE13Q4V321 117 aa7.48□□□□□ -1.21
NPLOC4-219ENST00000576713 C19orf54Q5BKX5 351 aa7.48□□□□□ -1.21
NPLOC4-219ENST00000576713 ZNF660Q6AZW8 331 aaPredicted RBP7.48□□□□□ -1.21
NPLOC4-219ENST00000576713 FAM71E2Q8N5Q1 922 aa7.48□□□□□ -1.21
NPLOC4-219ENST00000576713 C3orf56Q8N813 242 aa7.48□□□□□ -1.21
NPLOC4-219ENST00000576713 C11orf44Q8N8P7 122 aa7.48□□□□□ -1.21
NPLOC4-219ENST00000576713 OR4C13Q8NGP0 309 aa7.48□□□□□ -1.21
NPLOC4-219ENST00000576713 OR52I2Q8NH67 350 aa7.48□□□□□ -1.21
NPLOC4-219ENST00000576713 AP3S1Q92572 193 aa7.48□□□□□ -1.21
NPLOC4-219ENST00000576713 HSPB9Q9BQS6 159 aa7.48□□□□□ -1.21
NPLOC4-219ENST00000576713 GINS4Q9BRT9 223 aa7.48□□□□□ -1.21
NPLOC4-219ENST00000576713 NPFFR1Q9GZQ6 430 aa7.48□□□□□ -1.21
NPLOC4-219ENST00000576713 RANBP3Q9H6Z4 567 aaPredicted RBP7.48□□□□□ -1.21
NPLOC4-219ENST00000576713 PIPOXQ9P0Z9 390 aa7.48□□□□□ -1.21
NPLOC4-219ENST00000576713 KLK11Q9UBX7 282 aa7.48□□□□□ -1.21
NPLOC4-219ENST00000576713 RSL24D1Q9UHA3 163 aaKnown RBP7.48□□□□□ -1.21
NPLOC4-219ENST00000576713 LINC00527Q9UJ94 153 aa7.48□□□□□ -1.21
NPLOC4-219ENST00000576713 MOB4Q9Y3A3 225 aa7.48□□□□□ -1.21
NPLOC4-219ENST00000576713 CCDC160A6NGH7 325 aa7.47□□□□□ -1.21
NPLOC4-219ENST00000576713 RGS5O15539 181 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms