RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 PROCRQ9UNN8 238 aa11.24□□□□□ -0.61
PCDHGB3-201ENST00000576222 TMEM56-RWDD3S4R434 201 aa11.24□□□□□ -0.61
PCDHGB3-201ENST00000576222 NPIPB7O75200 414 aa11.24□□□□□ -0.61
PCDHGB3-201ENST00000576222 PQLC2Q6ZP29 291 aa11.24□□□□□ -0.61
PCDHGB3-201ENST00000576222 OR2J1Q9GZK6 312 aa11.24□□□□□ -0.61
PCDHGB3-201ENST00000576222 SCN8AQ9UQD0 1980 aa11.24□□□□□ -0.61
PCDHGB3-201ENST00000576222 A0A1B0GW64 132 aa11.24□□□□□ -0.61
PCDHGB3-201ENST00000576222 M0R1B8 84 aa11.24□□□□□ -0.61
PCDHGB3-201ENST00000576222 LYZL6O75951 148 aa11.24□□□□□ -0.61
PCDHGB3-201ENST00000576222 GABRA6Q16445 453 aa11.24□□□□□ -0.61
PCDHGB3-201ENST00000576222 GTF3AQ92664 365 aaKnown RBP11.24□□□□□ -0.61
PCDHGB3-201ENST00000576222 NDFIP1Q9BT67 221 aa11.24□□□□□ -0.61
PCDHGB3-201ENST00000576222 NUTF2P61970 127 aaKnown RBP11.24□□□□□ -0.61
PCDHGB3-201ENST00000576222 ZNF525Q8N782 197 aa11.24□□□□□ -0.61
PCDHGB3-201ENST00000576222 TMEM242Q9NWH2 141 aa11.24□□□□□ -0.61
PCDHGB3-201ENST00000576222 CASP8AP2Q9UKL3 1982 aa11.24□□□□□ -0.61
PCDHGB3-201ENST00000576222 ARHGEF17Q96PE2 2063 aaPredicted RBP11.24□□□□□ -0.61
PCDHGB3-201ENST00000576222 RAB29O14966 203 aa11.23□□□□□ -0.61
PCDHGB3-201ENST00000576222 OR2H2O95918 312 aa11.23□□□□□ -0.61
PCDHGB3-201ENST00000576222 COL8A1P27658 744 aa11.23□□□□□ -0.61
PCDHGB3-201ENST00000576222 NUBP1P53384 320 aa11.23□□□□□ -0.61
PCDHGB3-201ENST00000576222 HES1Q14469 280 aa11.23□□□□□ -0.61
PCDHGB3-201ENST00000576222 SAXO1Q8IYX7 474 aa11.23□□□□□ -0.61
PCDHGB3-201ENST00000576222 SP7Q8TDD2 431 aaPredicted RBP11.23□□□□□ -0.61
PCDHGB3-201ENST00000576222 SARAFQ96BY9 339 aa11.23□□□□□ -0.61
PCDHGB3-201ENST00000576222 IMMP2LQ96T52 175 aa11.23□□□□□ -0.61
PCDHGB3-201ENST00000576222 RTN4RQ9BZR6 473 aa11.23□□□□□ -0.61
PCDHGB3-201ENST00000576222 ZNF319Q9P2F9 582 aa11.23□□□□□ -0.61
PCDHGB3-201ENST00000576222 TRBV9A0A0B4J1U6 114 aa11.23□□□□□ -0.61
PCDHGB3-201ENST00000576222 DPRXA6NFQ7 191 aa11.23□□□□□ -0.61
PCDHGB3-201ENST00000576222 HBZP02008 142 aa11.23□□□□□ -0.61
PCDHGB3-201ENST00000576222 FXYD3Q14802 87 aa11.23□□□□□ -0.61
PCDHGB3-201ENST00000576222 SPINK14Q6IE38 97 aa11.23□□□□□ -0.61
PCDHGB3-201ENST00000576222 ZNF645Q8N7E2 425 aa11.23□□□□□ -0.61
PCDHGB3-201ENST00000576222 FLVCR1-AS1Q8TAF5 88 aa11.23□□□□□ -0.61
PCDHGB3-201ENST00000576222 DCAF16Q9NXF7 216 aa11.23□□□□□ -0.61
PCDHGB3-201ENST00000576222 SH3BGRL2Q9UJC5 107 aa11.23□□□□□ -0.61
PCDHGB3-201ENST00000576222 IGHV2-70P01814 119 aa11.23□□□□□ -0.61
PCDHGB3-201ENST00000576222 ZNF137PP52743 207 aa11.23□□□□□ -0.61
PCDHGB3-201ENST00000576222 LRTM2Q8N967 370 aa11.23□□□□□ -0.61
PCDHGB3-201ENST00000576222 C2orf88Q9BSF0 95 aa11.23□□□□□ -0.61
PCDHGB3-201ENST00000576222 ZNF355PQ9NSJ1 428 aa11.23□□□□□ -0.61
PCDHGB3-201ENST00000576222 GAGE10A6NGK3 116 aa11.23□□□□□ -0.61
PCDHGB3-201ENST00000576222 LYL1P12980 280 aa11.23□□□□□ -0.61
PCDHGB3-201ENST00000576222 KCNMB1Q16558 191 aa11.23□□□□□ -0.61
PCDHGB3-201ENST00000576222 OR4D5Q8NGN0 318 aa11.23□□□□□ -0.61
PCDHGB3-201ENST00000576222 FAM216AQ8WUB2 273 aa11.23□□□□□ -0.61
PCDHGB3-201ENST00000576222 SPSB4Q96A44 273 aa11.23□□□□□ -0.61
PCDHGB3-201ENST00000576222 PRNDQ9UKY0 176 aa11.23□□□□□ -0.61
PCDHGB3-201ENST00000576222 ID3Q02535 119 aa11.22□□□□□ -0.61
PCDHGB3-201ENST00000576222 DMWDQ09019 674 aa11.22□□□□□ -0.61
PCDHGB3-201ENST00000576222 C3orf80F5H4A9 247 aa11.22□□□□□ -0.61
PCDHGB3-201ENST00000576222 CLDN14O95500 239 aa11.22□□□□□ -0.61
PCDHGB3-201ENST00000576222 TRA2AQ13595 282 aaKnown RBP eCLIP11.22□□□□□ -0.61
PCDHGB3-201ENST00000576222 TPRX1Q8N7U7 411 aa11.22□□□□□ -0.61
PCDHGB3-201ENST00000576222 OR10S1Q8NGN2 331 aa11.22□□□□□ -0.61
PCDHGB3-201ENST00000576222 MRPL13Q9BYD1 178 aaKnown RBP11.22□□□□□ -0.61
PCDHGB3-201ENST00000576222 WNT5BQ9H1J7 359 aa11.22□□□□□ -0.61
PCDHGB3-201ENST00000576222 RHBDL1O75783 438 aa11.22□□□□□ -0.61
PCDHGB3-201ENST00000576222 EPHA8P29322 1005 aaPredicted RBP11.22□□□□□ -0.61
PCDHGB3-201ENST00000576222 ZNF766Q5HY98 468 aa11.22□□□□□ -0.61
PCDHGB3-201ENST00000576222 SSX8Q7RTT4 187 aa11.22□□□□□ -0.61
PCDHGB3-201ENST00000576222 DRAM1Q8N682 238 aa11.22□□□□□ -0.61
PCDHGB3-201ENST00000576222 OR1L1Q8NH94 360 aa11.22□□□□□ -0.61
PCDHGB3-201ENST00000576222 TMEM106BQ9NUM4 274 aa11.22□□□□□ -0.61
PCDHGB3-201ENST00000576222 IGKV3D-11A0A0A0MRZ8 115 aa11.21□□□□□ -0.61
PCDHGB3-201ENST00000576222 PROB1E7EW31 1015 aa11.21□□□□□ -0.61
PCDHGB3-201ENST00000576222 ATXN7O15265 892 aaPredicted RBP11.21□□□□□ -0.61
PCDHGB3-201ENST00000576222 AMY1AP04745 511 aa11.21□□□□□ -0.61
PCDHGB3-201ENST00000576222 FHL1Q13642 323 aa11.21□□□□□ -0.61
PCDHGB3-201ENST00000576222 C10orf91Q5T1B1 145 aa11.21□□□□□ -0.61
PCDHGB3-201ENST00000576222 BEND2Q8NDZ0 799 aa11.21□□□□□ -0.61
PCDHGB3-201ENST00000576222 J3QR06 171 aa11.21□□□□□ -0.61
PCDHGB3-201ENST00000576222 S1PR2O95136 353 aa11.21□□□□□ -0.61
PCDHGB3-201ENST00000576222 WNT5AP41221 380 aa11.21□□□□□ -0.61
PCDHGB3-201ENST00000576222 RIPPLY2Q5TAB7 128 aa11.21□□□□□ -0.61
PCDHGB3-201ENST00000576222 SLC25A34Q6PIV7 304 aa11.21□□□□□ -0.61
PCDHGB3-201ENST00000576222 OR1B1Q8NGR6 318 aa11.21□□□□□ -0.61
PCDHGB3-201ENST00000576222 OR2T6Q8NHC8 308 aa11.21□□□□□ -0.61
PCDHGB3-201ENST00000576222 GLRX2Q9NS18 164 aa11.21□□□□□ -0.61
PCDHGB3-201ENST00000576222 KLF2Q9Y5W3 355 aaPredicted RBP11.21□□□□□ -0.61
PCDHGB3-201ENST00000576222 PTPRDP23468 1912 aa11.21□□□□□ -0.61
PCDHGB3-201ENST00000576222 CELA2AP08217 269 aa11.21□□□□□ -0.62
PCDHGB3-201ENST00000576222 CCL1P22362 96 aa11.21□□□□□ -0.62
PCDHGB3-201ENST00000576222 CRYBB3P26998 211 aa11.21□□□□□ -0.62
PCDHGB3-201ENST00000576222 OR4F17Q8NGA8 305 aa11.21□□□□□ -0.62
PCDHGB3-201ENST00000576222 SLC25A40Q8TBP6 338 aa11.21□□□□□ -0.62
PCDHGB3-201ENST00000576222 TMEM45BQ96B21 275 aa11.21□□□□□ -0.62
PCDHGB3-201ENST00000576222 WNT10AQ9GZT5 417 aa11.21□□□□□ -0.62
PCDHGB3-201ENST00000576222 SMOC1Q9H4F8 434 aa11.21□□□□□ -0.62
PCDHGB3-201ENST00000576222 NGBQ9NPG2 151 aa11.21□□□□□ -0.62
PCDHGB3-201ENST00000576222 TBL2Q9Y4P3 447 aaKnown RBP11.21□□□□□ -0.62
PCDHGB3-201ENST00000576222 A0A1W2PN81 502 aa11.21□□□□□ -0.62
PCDHGB3-201ENST00000576222 CORTO00230 105 aa11.21□□□□□ -0.62
PCDHGB3-201ENST00000576222 RPL31P62899 125 aaKnown RBP11.21□□□□□ -0.62
PCDHGB3-201ENST00000576222 C10orf113Q5VZT2 155 aa11.21□□□□□ -0.62
PCDHGB3-201ENST00000576222 CALHM1Q8IU99 346 aa11.21□□□□□ -0.62
PCDHGB3-201ENST00000576222 TMEM54Q969K7 222 aa11.21□□□□□ -0.62
PCDHGB3-201ENST00000576222 NPCDR1Q9BY65 106 aa11.21□□□□□ -0.62
PCDHGB3-201ENST00000576222 PRDM14Q9GZV8 571 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms