RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 TRBV5-7A0A0A0MS05 114 aa6.76□□□□□ -1.33
SMG6-218ENST00000575454 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.76□□□□□ -1.33
SMG6-218ENST00000575454 BMPR1BO00238 502 aa6.76□□□□□ -1.33
SMG6-218ENST00000575454 EI24O14681 340 aa6.76□□□□□ -1.33
SMG6-218ENST00000575454 MPPED1O15442 326 aa6.76□□□□□ -1.33
SMG6-218ENST00000575454 NAPSAO96009 420 aa6.76□□□□□ -1.33
SMG6-218ENST00000575454 OR9G9P0C7N8 305 aa6.76□□□□□ -1.33
SMG6-218ENST00000575454 FOLR2P14207 255 aa6.76□□□□□ -1.33
SMG6-218ENST00000575454 MYL12AP19105 171 aa6.76□□□□□ -1.33
SMG6-218ENST00000575454 RASSF2P50749 326 aa6.76□□□□□ -1.33
SMG6-218ENST00000575454 MED21Q13503 144 aa6.76□□□□□ -1.33
SMG6-218ENST00000575454 ZIK1Q3SY52 487 aaPredicted RBP6.76□□□□□ -1.33
SMG6-218ENST00000575454 ZNF880Q6PDB4 577 aa6.76□□□□□ -1.33
SMG6-218ENST00000575454 Q6ZWC4 215 aa6.76□□□□□ -1.33
SMG6-218ENST00000575454 C5orf24Q7Z6I8 188 aa6.76□□□□□ -1.33
SMG6-218ENST00000575454 WFDC3Q8IUB2 231 aa6.76□□□□□ -1.33
SMG6-218ENST00000575454 RPP25LQ8N5L8 163 aaKnown RBP6.76□□□□□ -1.33
SMG6-218ENST00000575454 ZNF383Q8NA42 475 aa6.76□□□□□ -1.33
SMG6-218ENST00000575454 DRAXINQ8NBI3 349 aaPredicted RBP6.76□□□□□ -1.33
SMG6-218ENST00000575454 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.76□□□□□ -1.33
SMG6-218ENST00000575454 NECAP1Q8NC96 275 aa6.76□□□□□ -1.33
SMG6-218ENST00000575454 ADAD2Q8NCV1 583 aaKnown RBP6.76□□□□□ -1.33
SMG6-218ENST00000575454 SETD6Q8TBK2 473 aa6.76□□□□□ -1.33
SMG6-218ENST00000575454 ORAI1Q96D31 301 aa6.76□□□□□ -1.33
SMG6-218ENST00000575454 FAAP24Q9BTP7 215 aa6.76□□□□□ -1.33
SMG6-218ENST00000575454 FGF20Q9NP95 211 aaPredicted RBP6.76□□□□□ -1.33
SMG6-218ENST00000575454 SLC35D1Q9NTN3 355 aa6.76□□□□□ -1.33
SMG6-218ENST00000575454 AASSQ9UDR5 926 aa6.76□□□□□ -1.33
SMG6-218ENST00000575454 ADAM30Q9UKF2 790 aa6.76□□□□□ -1.33
SMG6-218ENST00000575454 TRBV6-6A0A0A6YYG2 114 aa6.75□□□□□ -1.33
SMG6-218ENST00000575454 A0A0J9YWU9 116 aa6.75□□□□□ -1.33
SMG6-218ENST00000575454 MSGN1A6NI15 193 aa6.75□□□□□ -1.33
SMG6-218ENST00000575454 C2orf70A6NJV1 201 aa6.75□□□□□ -1.33
SMG6-218ENST00000575454 LGALS9O00182 355 aa6.75□□□□□ -1.33
SMG6-218ENST00000575454 UBE2CO00762 179 aa6.75□□□□□ -1.33
SMG6-218ENST00000575454 CREBL2O60519 120 aaPredicted RBP6.75□□□□□ -1.33
SMG6-218ENST00000575454 GGCTO75223 188 aaKnown RBP6.75□□□□□ -1.33
SMG6-218ENST00000575454 CRYGBP07316 175 aa6.75□□□□□ -1.33
SMG6-218ENST00000575454 RRASP10301 218 aa6.75□□□□□ -1.33
SMG6-218ENST00000575454 MAPK3P27361 379 aaPredicted RBP6.75□□□□□ -1.33
SMG6-218ENST00000575454 APOC4P55056 127 aa6.75□□□□□ -1.33
SMG6-218ENST00000575454 SSBP2P81877 361 aaPredicted RBP6.75□□□□□ -1.33
SMG6-218ENST00000575454 RHOGP84095 191 aa6.75□□□□□ -1.33
SMG6-218ENST00000575454 PJVKQ0ZLH3 352 aa6.75□□□□□ -1.33
SMG6-218ENST00000575454 EXOSC2Q13868 293 aaKnown RBP6.75□□□□□ -1.33
SMG6-218ENST00000575454 TTC23Q5W5X9 447 aa6.75□□□□□ -1.33
SMG6-218ENST00000575454 ZNF57Q68EA5 555 aaPredicted RBP6.75□□□□□ -1.33
SMG6-218ENST00000575454 XAF1Q6GPH4 301 aa6.75□□□□□ -1.33
SMG6-218ENST00000575454 LYG2Q86SG7 212 aa6.75□□□□□ -1.33
SMG6-218ENST00000575454 OR52B4Q8NGK2 314 aa6.75□□□□□ -1.33
SMG6-218ENST00000575454 OR13C5Q8NGS8 318 aa6.75□□□□□ -1.33
SMG6-218ENST00000575454 WDR89Q96FK6 387 aaPredicted RBP6.75□□□□□ -1.33
SMG6-218ENST00000575454 HARBI1Q96MB7 349 aa6.75□□□□□ -1.33
SMG6-218ENST00000575454 PARP12Q9H0J9 701 aaKnown RBP6.75□□□□□ -1.33
SMG6-218ENST00000575454 WFDC10AQ9H1F0 79 aa6.75□□□□□ -1.33
SMG6-218ENST00000575454 AKIP1Q9NQ31 210 aa6.75□□□□□ -1.33
SMG6-218ENST00000575454 PLEKHJ1Q9NW61 149 aa6.75□□□□□ -1.33
SMG6-218ENST00000575454 ZNF230Q9UIE0 474 aaPredicted RBP6.75□□□□□ -1.33
SMG6-218ENST00000575454 EXOSC1Q9Y3B2 195 aaKnown RBP6.75□□□□□ -1.33
SMG6-218ENST00000575454 TRBV9A0A0B4J1U6 114 aa6.74□□□□□ -1.33
SMG6-218ENST00000575454 M0R1X1 148 aa6.74□□□□□ -1.33
SMG6-218ENST00000575454 SHOXO15266 292 aa6.74□□□□□ -1.33
SMG6-218ENST00000575454 SPRY2O43597 315 aa6.74□□□□□ -1.33
SMG6-218ENST00000575454 PROP1O75360 226 aa6.74□□□□□ -1.33
SMG6-218ENST00000575454 IGLV2-23P01705 113 aa6.74□□□□□ -1.33
SMG6-218ENST00000575454 SERPINB10P48595 397 aa6.74□□□□□ -1.33
SMG6-218ENST00000575454 ETV1P50549 477 aa6.74□□□□□ -1.33
SMG6-218ENST00000575454 TAS2R43P59537 309 aa6.74□□□□□ -1.33
SMG6-218ENST00000575454 RPS11P62280 158 aaKnown RBP eCLIP6.74□□□□□ -1.33
SMG6-218ENST00000575454 RPS27AP62979 156 aaKnown RBP6.74□□□□□ -1.33
SMG6-218ENST00000575454 TPBGQ13641 420 aa6.74□□□□□ -1.33
SMG6-218ENST00000575454 PRSS8Q16651 343 aa6.74□□□□□ -1.33
SMG6-218ENST00000575454 RTL8BQ17RB0 113 aa6.74□□□□□ -1.33
SMG6-218ENST00000575454 VMA21Q3ZAQ7 101 aa6.74□□□□□ -1.33
SMG6-218ENST00000575454 FAM106AQ4KMX7 169 aa6.74□□□□□ -1.33
SMG6-218ENST00000575454 OR2G6Q5TZ20 316 aa6.74□□□□□ -1.33
SMG6-218ENST00000575454 C6orf201Q7Z4U5 140 aa6.74□□□□□ -1.33
SMG6-218ENST00000575454 SLC25A42Q86VD7 318 aa6.74□□□□□ -1.33
SMG6-218ENST00000575454 GPHB5Q86YW7 130 aa6.74□□□□□ -1.33
SMG6-218ENST00000575454 CBR4Q8N4T8 237 aa6.74□□□□□ -1.33
SMG6-218ENST00000575454 TEX45Q8NA69 505 aa6.74□□□□□ -1.33
SMG6-218ENST00000575454 KCNG3Q8TAE7 436 aa6.74□□□□□ -1.33
SMG6-218ENST00000575454 SPIN2AQ99865 258 aa6.74□□□□□ -1.33
SMG6-218ENST00000575454 SPIN2BQ9BPZ2 258 aa6.74□□□□□ -1.33
SMG6-218ENST00000575454 TMEM59Q9BXS4 323 aa6.74□□□□□ -1.33
SMG6-218ENST00000575454 OR1A1Q9P1Q5 309 aa6.74□□□□□ -1.33
SMG6-218ENST00000575454 HERC1Q15751 4861 aa6.73□□□□□ -1.33
SMG6-218ENST00000575454 TNCP24821 2201 aa6.73□□□□□ -1.33
SMG6-218ENST00000575454 TRAV25A0A0B4J276 109 aa6.73□□□□□ -1.33
SMG6-218ENST00000575454 LOC100130705A0A1B0GUX0 176 aa6.73□□□□□ -1.33
SMG6-218ENST00000575454 A0A1W2PPK0 400 aa6.73□□□□□ -1.33
SMG6-218ENST00000575454 ERICH4A6NGS2 130 aa6.73□□□□□ -1.33
SMG6-218ENST00000575454 CIB2O75838 187 aa6.73□□□□□ -1.33
SMG6-218ENST00000575454 ACTL6BO94805 426 aa6.73□□□□□ -1.33
SMG6-218ENST00000575454 BPNT1O95861 308 aa6.73□□□□□ -1.33
SMG6-218ENST00000575454 SNRPBP14678 240 aaKnown RBP6.73□□□□□ -1.33
SMG6-218ENST00000575454 CBLN1P23435 193 aa6.73□□□□□ -1.33
SMG6-218ENST00000575454 UBE2KP61086 200 aa6.73□□□□□ -1.33
SMG6-218ENST00000575454 HLA-DRB3P79483 266 aa6.73□□□□□ -1.33
SMG6-218ENST00000575454 DEFA5Q01523 94 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms