RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 FAM234AQ9H0X4 552 aa13.52□□□□□ -0.24
POLR2A-201ENST00000572844 GCM1Q9NP62 436 aa13.52□□□□□ -0.24
POLR2A-201ENST00000572844 CALYQ9NYX4 217 aa13.52□□□□□ -0.24
POLR2A-201ENST00000572844 CADP27708 2225 aa13.52□□□□□ -0.24
POLR2A-201ENST00000572844 A0A0G2JNJ9 132 aa13.52□□□□□ -0.25
POLR2A-201ENST00000572844 A0A1B0GV50 99 aa13.52□□□□□ -0.25
POLR2A-201ENST00000572844 PROP1O75360 226 aa13.52□□□□□ -0.25
POLR2A-201ENST00000572844 SRP19P09132 144 aaKnown RBP13.52□□□□□ -0.25
POLR2A-201ENST00000572844 BMP5P22003 454 aa13.52□□□□□ -0.25
POLR2A-201ENST00000572844 PTAFRP25105 342 aa13.52□□□□□ -0.25
POLR2A-201ENST00000572844 CCKARP32238 428 aa13.52□□□□□ -0.25
POLR2A-201ENST00000572844 KIR2DS2P43631 304 aa13.52□□□□□ -0.25
POLR2A-201ENST00000572844 RAB7AP51149 207 aa13.52□□□□□ -0.25
POLR2A-201ENST00000572844 ICAM4Q14773 271 aa13.52□□□□□ -0.25
POLR2A-201ENST00000572844 STUMQ69YW2 141 aa13.52□□□□□ -0.25
POLR2A-201ENST00000572844 TMEM108Q6UXF1 575 aa13.52□□□□□ -0.25
POLR2A-201ENST00000572844 ZNRF1Q8ND25 227 aa13.52□□□□□ -0.25
POLR2A-201ENST00000572844 DTD1Q8TEA8 209 aa13.52□□□□□ -0.25
POLR2A-201ENST00000572844 TAF15Q92804 592 aaKnown RBP eCLIP13.52□□□□□ -0.25
POLR2A-201ENST00000572844 RPS10P5Q9NQ39 176 aa13.52□□□□□ -0.25
POLR2A-201ENST00000572844 RPRMQ9NS64 109 aa13.52□□□□□ -0.25
POLR2A-201ENST00000572844 Q9UFV3 132 aa13.52□□□□□ -0.25
POLR2A-201ENST00000572844 MLXQ9UH92 298 aa13.52□□□□□ -0.25
POLR2A-201ENST00000572844 PRELID3BQ9Y3B1 194 aa13.52□□□□□ -0.25
POLR2A-201ENST00000572844 HCFC1P51610 2035 aa13.51□□□□□ -0.25
POLR2A-201ENST00000572844 MEX3AA1L020 520 aaKnown RBP13.51□□□□□ -0.25
POLR2A-201ENST00000572844 MARCH11A6NNE9 402 aa13.51□□□□□ -0.25
POLR2A-201ENST00000572844 PMS2P5A8MQ11 134 aa13.51□□□□□ -0.25
POLR2A-201ENST00000572844 C16orf97H3BN30 126 aa13.51□□□□□ -0.25
POLR2A-201ENST00000572844 TMEM30BQ3MIR4 351 aa13.51□□□□□ -0.25
POLR2A-201ENST00000572844 AVPI1Q5T686 147 aa13.51□□□□□ -0.25
POLR2A-201ENST00000572844 NCR3LG1Q68D85 454 aa13.51□□□□□ -0.25
POLR2A-201ENST00000572844 C22orf34Q6ZV56 151 aa13.51□□□□□ -0.25
POLR2A-201ENST00000572844 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.51□□□□□ -0.25
POLR2A-201ENST00000572844 R3HDM4Q96D70 268 aa13.51□□□□□ -0.25
POLR2A-201ENST00000572844 DIRC2Q96SL1 478 aa13.51□□□□□ -0.25
POLR2A-201ENST00000572844 TMEM147Q9BVK8 224 aa13.51□□□□□ -0.25
POLR2A-201ENST00000572844 JKAMPQ9P055 326 aa13.51□□□□□ -0.25
POLR2A-201ENST00000572844 TP53TG5Q9Y2B4 290 aa13.51□□□□□ -0.25
POLR2A-201ENST00000572844 ZNF835Q9Y2P0 537 aa13.51□□□□□ -0.25
POLR2A-201ENST00000572844 RAI1Q7Z5J4 1906 aaPredicted RBP13.51□□□□□ -0.25
POLR2A-201ENST00000572844 OR13C7P0DN81 318 aa13.51□□□□□ -0.25
POLR2A-201ENST00000572844 PMS2P11Q13670 270 aa13.51□□□□□ -0.25
POLR2A-201ENST00000572844 TMEM41BQ5BJD5 291 aa13.51□□□□□ -0.25
POLR2A-201ENST00000572844 RXFP4Q8TDU9 374 aa13.51□□□□□ -0.25
POLR2A-201ENST00000572844 IFI27L2Q9H2X8 130 aa13.51□□□□□ -0.25
POLR2A-201ENST00000572844 PRRC2CQ9Y520 2896 aaKnown RBP13.51□□□□□ -0.25
POLR2A-201ENST00000572844 DYSFO75923 2080 aa13.5□□□□□ -0.25
POLR2A-201ENST00000572844 LOC102723971A0A1B0GUV8 181 aa13.5□□□□□ -0.25
POLR2A-201ENST00000572844 M0R036 132 aa13.5□□□□□ -0.25
POLR2A-201ENST00000572844 SNRNP70P08621 437 aaKnown RBP13.5□□□□□ -0.25
POLR2A-201ENST00000572844 EDDM3BP56851 147 aa13.5□□□□□ -0.25
POLR2A-201ENST00000572844 C17orf58Q2M2W7 97 aa13.5□□□□□ -0.25
POLR2A-201ENST00000572844 VWC2Q2TAL6 325 aa13.5□□□□□ -0.25
POLR2A-201ENST00000572844 Q8NA96 180 aa13.5□□□□□ -0.25
POLR2A-201ENST00000572844 LINC00574Q9H8X3 128 aa13.5□□□□□ -0.25
POLR2A-201ENST00000572844 CLN8Q9UBY8 286 aa13.5□□□□□ -0.25
POLR2A-201ENST00000572844 CD55P08174 381 aa13.49□□□□□ -0.25
POLR2A-201ENST00000572844 GNB2P62879 340 aa13.49□□□□□ -0.25
POLR2A-201ENST00000572844 HAGHQ16775 308 aa13.49□□□□□ -0.25
POLR2A-201ENST00000572844 RNF212Q495C1 297 aa13.49□□□□□ -0.25
POLR2A-201ENST00000572844 PDLIM3Q53GG5 364 aaPredicted RBP13.49□□□□□ -0.25
POLR2A-201ENST00000572844 TEX36Q5VZQ5 186 aa13.49□□□□□ -0.25
POLR2A-201ENST00000572844 OR52E5Q8NH55 327 aa13.49□□□□□ -0.25
POLR2A-201ENST00000572844 CLCC1Q96S66 551 aa13.49□□□□□ -0.25
POLR2A-201ENST00000572844 GFOD1Q9NXC2 390 aa13.49□□□□□ -0.25
POLR2A-201ENST00000572844 KBTBD11-OT1A0A1B0GTJ5 212 aa13.49□□□□□ -0.25
POLR2A-201ENST00000572844 ZG16O60844 167 aa13.49□□□□□ -0.25
POLR2A-201ENST00000572844 CRYBA1P05813 215 aa13.49□□□□□ -0.25
POLR2A-201ENST00000572844 LTC4SQ16873 150 aa13.49□□□□□ -0.25
POLR2A-201ENST00000572844 OR8G2PQ6IF36 304 aa13.49□□□□□ -0.25
POLR2A-201ENST00000572844 ETV3LQ6ZN32 361 aa13.49□□□□□ -0.25
POLR2A-201ENST00000572844 OR10P1Q8NGE3 313 aa13.49□□□□□ -0.25
POLR2A-201ENST00000572844 CORO2AQ92828 525 aa13.49□□□□□ -0.25
POLR2A-201ENST00000572844 GAFA1Q96PS6 74 aa13.49□□□□□ -0.25
POLR2A-201ENST00000572844 ZNF665Q9H7R5 613 aa13.49□□□□□ -0.25
POLR2A-201ENST00000572844 CISD1Q9NZ45 108 aaKnown RBP13.49□□□□□ -0.25
POLR2A-201ENST00000572844 ZFHX4Q86UP3 3567 aa13.48□□□□□ -0.25
POLR2A-201ENST00000572844 TRGV10A0A0A0MS01 117 aa13.48□□□□□ -0.25
POLR2A-201ENST00000572844 UBE2L5PA0A1B0GUS4 154 aa13.48□□□□□ -0.25
POLR2A-201ENST00000572844 M0R1X1 148 aa13.48□□□□□ -0.25
POLR2A-201ENST00000572844 ZNF134P52741 427 aa13.48□□□□□ -0.25
POLR2A-201ENST00000572844 ZNF726P1Q15940 193 aa13.48□□□□□ -0.25
POLR2A-201ENST00000572844 ZNF787Q6DD87 383 aa13.48□□□□□ -0.25
POLR2A-201ENST00000572844 ZNF788Q6ZQV5 615 aa13.48□□□□□ -0.25
POLR2A-201ENST00000572844 CISD2Q8N5K1 135 aaKnown RBP13.48□□□□□ -0.25
POLR2A-201ENST00000572844 DDB2Q92466 427 aa13.48□□□□□ -0.25
POLR2A-201ENST00000572844 RCC1LQ96I51 464 aaKnown RBP13.48□□□□□ -0.25
POLR2A-201ENST00000572844 LOC400499M0QZD8 3231 aa13.48□□□□□ -0.25
POLR2A-201ENST00000572844 SPTBN2O15020 2390 aa13.48□□□□□ -0.25
POLR2A-201ENST00000572844 FCGR3BO75015 233 aa13.48□□□□□ -0.25
POLR2A-201ENST00000572844 MT-ND4LP03901 98 aa13.48□□□□□ -0.25
POLR2A-201ENST00000572844 SPACA3Q8IXA5 215 aa13.48□□□□□ -0.25
POLR2A-201ENST00000572844 VSIRQ9H7M9 311 aa13.48□□□□□ -0.25
POLR2A-201ENST00000572844 ZGRF1Q86YA3 2104 aa13.47□□□□□ -0.25
POLR2A-201ENST00000572844 ZNF729A6NN14 1252 aaPredicted RBP13.47□□□□□ -0.25
POLR2A-201ENST00000572844 CEBPZOSA8MTT3 80 aa13.47□□□□□ -0.25
POLR2A-201ENST00000572844 MBP02144 154 aa13.47□□□□□ -0.25
POLR2A-201ENST00000572844 OR9G9P0C7N8 305 aa13.47□□□□□ -0.25
POLR2A-201ENST00000572844 IRF2P14316 349 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms