RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 CHD5Q8TDI0 1954 aa3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 IGHV3-16A0A0C4DH30 117 aa3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 LOC102725191A0A1B0GVB3 256 aa3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 EPOPA6NHQ4 379 aa3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 RPL37AP8A6NKH3 93 aa3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 M0R1X1 148 aa3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 CORTO00230 105 aa3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 BGLAPP02818 100 aa3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 ADRA2AP08913 450 aa3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 ZNF30P17039 623 aa3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 GABRA3P34903 492 aa3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 LPAR6P43657 344 aa3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 GABRA2P47869 451 aa3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 INPP1P49441 399 aa3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 RPL23P62829 140 aaKnown RBP3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 HERVK_113P63121 156 aa3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 DHRS2Q13268 280 aa3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 PRR30Q53SZ7 412 aaPredicted RBP3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 C9orf66Q5T8R8 295 aa3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 ZNF773Q6PK81 442 aa3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 REG3GQ6UW15 175 aa3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 PRNTQ86SH4 94 aa3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 CROCCP2Q86T23 111 aa3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 ZNF575Q86XF7 245 aa3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 C12orf45Q8N5I9 185 aaPredicted RBP3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 DRAM1Q8N682 238 aa3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 KRTCAP2Q8N6L1 136 aa3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 OR51T1Q8NGJ9 327 aa3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 OR52P1PQ8NH57 321 aa3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 DDB2Q92466 427 aa3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 MS4A6EQ96DS6 147 aa3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 IGF2BP2-AS1Q96M15 143 aa3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 OR8D2Q9GZM6 311 aa3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 TAF9BQ9HBM6 251 aa3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 TVP23BQ9NYZ1 205 aa3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 DNAJC12Q9UKB3 198 aa3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 FLVCR1Q9Y5Y0 555 aa3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 F11RQ9Y624 299 aaKnown RBP3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 WDR62O43379 1518 aa3.8□□□□□ -1.8
TOPBP1-210ENST00000572787 OVOS2A0A0G2JMS6 1433 aa3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 TRAV38-1A0A0B4J264 116 aa3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 CCL15-CCL14A0A0B4J2E2 113 aa3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 LGALS9O00182 355 aa3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 GSTZ1O43708 216 aaPredicted RBP3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 OR7C2O60412 319 aa3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 SRSF10O75494 262 aaKnown RBP3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 DEDDO75618 318 aa3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 OPN1SWP03999 348 aa3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 CHTF8P0CG12 524 aa3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 BCL2P10415 239 aa3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 CCR2P41597 374 aa3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 RPS25P62851 125 aaKnown RBP3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 CRADDP78560 199 aa3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 REG3AQ06141 175 aa3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 SRSF4Q08170 494 aaKnown RBP3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 ENDOGQ14249 297 aaKnown RBP3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 GUCA2BQ16661 112 aa3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 ORMDL2Q53FV1 153 aa3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 Q6Q795 121 aa3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 RASL11AQ6T310 242 aa3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 TEX261Q6UWH6 196 aa3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 RFLNAQ6ZTI6 216 aa3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 CTAGE3PQ8IX95 158 aa3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 ZNF418Q8TF45 676 aaPredicted RBP3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 TMEM106AQ96A25 262 aa3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 CMBLQ96DG6 245 aa3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 GNPNAT1Q96EK6 184 aaPredicted RBP3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 OR2A5Q96R48 311 aa3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 F2RL3Q96RI0 385 aa3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 SOSTQ9BQB4 213 aa3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 SAMD10Q9BYL1 202 aa3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 GTSF1LQ9H1H1 148 aa3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 LINC00597Q9H2U6 94 aa3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 ZNF696Q9H7X3 374 aa3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 PTGES2Q9H7Z7 377 aa3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 KLK13Q9UKR3 277 aa3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 WDR81Q562E7 1941 aa3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 CACNA1SQ13698 1873 aa3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 CHD2O14647 1828 aaKnown RBP3.79□□□□□ -1.8
TOPBP1-210ENST00000572787 ZNF705GA8MUZ8 300 aaPredicted RBP3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 J3QR89 54 aa3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 J3QRK9 145 aa3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 M0R143 59 aa3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 DNASE2O00115 360 aaPredicted RBP3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 OVOL1O14753 267 aa3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 DPM2O94777 84 aa3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 DUSP14O95147 198 aaKnown RBP3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 CXorf1O96002 111 aa3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 CD48P09326 243 aa3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 SMIM17P0DL12 118 aa3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 SMIM10L2AP0DMW4 78 aa3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 SMIM10L2BP0DMW5 78 aa3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 TDGF1P13385 188 aa3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 AZU1P20160 251 aa3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 FGF7P21781 194 aa3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 IL3RAP26951 378 aa3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 EIF2B2P49770 351 aaKnown RBP3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 TDGF1P3P51864 188 aa3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 HBA1P69905 142 aa3.78□□□□□ -1.8
TOPBP1-210ENST00000572787 EGFEM1PQ0D2K5 195 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms