RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 KIAA0141Q14154 515 aaPredicted RBP6.81□□□□□ -1.32
SMG6-210ENST00000572205 CDNFQ49AH0 187 aa6.81□□□□□ -1.32
SMG6-210ENST00000572205 KPRPQ5T749 579 aaPredicted RBP6.81□□□□□ -1.32
SMG6-210ENST00000572205 STPG2Q8N412 459 aa6.81□□□□□ -1.32
SMG6-210ENST00000572205 C16orf92Q96LL3 132 aa6.81□□□□□ -1.32
SMG6-210ENST00000572205 ATG5Q9H1Y0 275 aa6.81□□□□□ -1.32
SMG6-210ENST00000572205 AUNIPQ9H7T9 357 aa6.81□□□□□ -1.32
SMG6-210ENST00000572205 SDHAF2Q9NX18 166 aa6.81□□□□□ -1.32
SMG6-210ENST00000572205 ABRACLQ9P1F3 81 aa6.81□□□□□ -1.32
SMG6-210ENST00000572205 LINC00527Q9UJ94 153 aa6.81□□□□□ -1.32
SMG6-210ENST00000572205 A0A0A6YYH2 397 aa6.8□□□□□ -1.32
SMG6-210ENST00000572205 OR5H14A6NHG9 310 aa6.8□□□□□ -1.32
SMG6-210ENST00000572205 A6NJ64 397 aa6.8□□□□□ -1.32
SMG6-210ENST00000572205 LINC00473A8K010 186 aa6.8□□□□□ -1.32
SMG6-210ENST00000572205 RAB29O14966 203 aa6.8□□□□□ -1.32
SMG6-210ENST00000572205 SOX15O60248 233 aa6.8□□□□□ -1.32
SMG6-210ENST00000572205 TMEM127O75204 238 aa6.8□□□□□ -1.32
SMG6-210ENST00000572205 OPN1MWP04001 364 aa6.8□□□□□ -1.32
SMG6-210ENST00000572205 EIF4EP06730 217 aaKnown RBP6.8□□□□□ -1.32
SMG6-210ENST00000572205 CRYGBP07316 175 aa6.8□□□□□ -1.32
SMG6-210ENST00000572205 OPN1MW2P0DN77 364 aa6.8□□□□□ -1.32
SMG6-210ENST00000572205 OPN1MW3P0DN78 364 aa6.8□□□□□ -1.32
SMG6-210ENST00000572205 PPIFP30405 207 aaKnown RBP6.8□□□□□ -1.32
SMG6-210ENST00000572205 CEACAM6P40199 344 aa6.8□□□□□ -1.32
SMG6-210ENST00000572205 VBP1P61758 197 aa6.8□□□□□ -1.32
SMG6-210ENST00000572205 HES1Q14469 280 aa6.8□□□□□ -1.32
SMG6-210ENST00000572205 KIR2DS1Q14954 304 aa6.8□□□□□ -1.32
SMG6-210ENST00000572205 TIMM50Q3ZCQ8 353 aa6.8□□□□□ -1.32
SMG6-210ENST00000572205 IDNKQ5T6J7 187 aa6.8□□□□□ -1.32
SMG6-210ENST00000572205 ZNF660Q6AZW8 331 aaPredicted RBP6.8□□□□□ -1.32
SMG6-210ENST00000572205 ZNF329Q86UD4 541 aa6.8□□□□□ -1.32
SMG6-210ENST00000572205 ANKRD13BQ86YJ7 626 aa6.8□□□□□ -1.32
SMG6-210ENST00000572205 GVQW1Q8N7I0 195 aa6.8□□□□□ -1.32
SMG6-210ENST00000572205 DRAXINQ8NBI3 349 aaPredicted RBP6.8□□□□□ -1.32
SMG6-210ENST00000572205 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.8□□□□□ -1.32
SMG6-210ENST00000572205 OR5AU1Q8NGC0 362 aa6.8□□□□□ -1.32
SMG6-210ENST00000572205 OR8H1Q8NGG4 311 aa6.8□□□□□ -1.32
SMG6-210ENST00000572205 OR2D2Q9H210 308 aa6.8□□□□□ -1.32
SMG6-210ENST00000572205 PIPOXQ9P0Z9 390 aa6.8□□□□□ -1.32
SMG6-210ENST00000572205 GAB2Q9UQC2 676 aa6.8□□□□□ -1.32
SMG6-210ENST00000572205 METTL21EPA6NDL7 271 aa6.79□□□□□ -1.32
SMG6-210ENST00000572205 BET1O15155 118 aa6.79□□□□□ -1.32
SMG6-210ENST00000572205 ATP6V0E1O15342 81 aa6.79□□□□□ -1.32
SMG6-210ENST00000572205 NBR2O15453 112 aa6.79□□□□□ -1.32
SMG6-210ENST00000572205 CSF1P09603 554 aa6.79□□□□□ -1.32
SMG6-210ENST00000572205 PSMB8P28062 276 aa6.79□□□□□ -1.32
SMG6-210ENST00000572205 SERPINB10P48595 397 aa6.79□□□□□ -1.32
SMG6-210ENST00000572205 MMDQ15546 238 aa6.79□□□□□ -1.32
SMG6-210ENST00000572205 PNLIPRP3Q17RR3 467 aa6.79□□□□□ -1.32
SMG6-210ENST00000572205 C5orf64Q2M2E5 130 aa6.79□□□□□ -1.32
SMG6-210ENST00000572205 BEAN1Q3B7T3 259 aa6.79□□□□□ -1.32
SMG6-210ENST00000572205 LCNL1Q6ZST4 164 aa6.79□□□□□ -1.32
SMG6-210ENST00000572205 SLC35E3Q7Z769 313 aa6.79□□□□□ -1.32
SMG6-210ENST00000572205 DCSTAMPQ9H295 470 aa6.79□□□□□ -1.32
SMG6-210ENST00000572205 ANXA10Q9UJ72 324 aa6.79□□□□□ -1.32
SMG6-210ENST00000572205 RNF150Q9ULK6 438 aa6.79□□□□□ -1.32
SMG6-210ENST00000572205 X6R8D5 127 aa6.79□□□□□ -1.32
SMG6-210ENST00000572205 PSMB11A5LHX3 300 aa6.78□□□□□ -1.32
SMG6-210ENST00000572205 SRRM4A7MD48 611 aaKnown RBP6.78□□□□□ -1.32
SMG6-210ENST00000572205 G3V4G9 280 aa6.78□□□□□ -1.32
SMG6-210ENST00000572205 FCN1O00602 326 aa6.78□□□□□ -1.32
SMG6-210ENST00000572205 XRCC3O43542 346 aa6.78□□□□□ -1.32
SMG6-210ENST00000572205 SCGNO76038 276 aa6.78□□□□□ -1.32
SMG6-210ENST00000572205 IGLV1-40P01703 118 aa6.78□□□□□ -1.32
SMG6-210ENST00000572205 IGHG4P01861 327 aa6.78□□□□□ -1.32
SMG6-210ENST00000572205 HLA-DQB1P01920 261 aa6.78□□□□□ -1.32
SMG6-210ENST00000572205 DUTP33316 252 aaKnown RBP6.78□□□□□ -1.32
SMG6-210ENST00000572205 RANBP1P43487 201 aa6.78□□□□□ -1.32
SMG6-210ENST00000572205 TAS2R20P59543 309 aa6.78□□□□□ -1.32
SMG6-210ENST00000572205 RPL23AP62750 156 aaKnown RBP6.78□□□□□ -1.32
SMG6-210ENST00000572205 RPL30P62888 115 aaKnown RBP6.78□□□□□ -1.32
SMG6-210ENST00000572205 NSUN5P1Q3KNT7 163 aa6.78□□□□□ -1.32
SMG6-210ENST00000572205 C9orf152Q5JTZ5 239 aa6.78□□□□□ -1.32
SMG6-210ENST00000572205 UBE2NLQ5JXB2 153 aa6.78□□□□□ -1.32
SMG6-210ENST00000572205 LCE2AQ5TA79 106 aaPredicted RBP6.78□□□□□ -1.32
SMG6-210ENST00000572205 ASPHD1Q5U4P2 390 aa6.78□□□□□ -1.32
SMG6-210ENST00000572205 HOGA1Q86XE5 327 aa6.78□□□□□ -1.32
SMG6-210ENST00000572205 LINC00482Q8N8I6 264 aa6.78□□□□□ -1.32
SMG6-210ENST00000572205 DTX3Q8N9I9 347 aa6.78□□□□□ -1.32
SMG6-210ENST00000572205 WFDC9Q8NEX5 89 aa6.78□□□□□ -1.32
SMG6-210ENST00000572205 FAM110DQ8TAY7 271 aaPredicted RBP6.78□□□□□ -1.32
SMG6-210ENST00000572205 MRPS26Q9BYN8 205 aaKnown RBP6.78□□□□□ -1.32
SMG6-210ENST00000572205 GHITMQ9H3K2 345 aa6.78□□□□□ -1.32
SMG6-210ENST00000572205 FBXL15Q9H469 300 aa6.78□□□□□ -1.32
SMG6-210ENST00000572205 WASHC3Q9Y3C0 194 aa6.78□□□□□ -1.32
SMG6-210ENST00000572205 HUWE1Q7Z6Z7 4374 aaKnown RBP6.77□□□□□ -1.33
SMG6-210ENST00000572205 TRAV18A0A075B6X5 111 aa6.77□□□□□ -1.33
SMG6-210ENST00000572205 G3V318 75 aa6.77□□□□□ -1.33
SMG6-210ENST00000572205 M0R1X1 148 aa6.77□□□□□ -1.33
SMG6-210ENST00000572205 AP4M1O00189 453 aa6.77□□□□□ -1.33
SMG6-210ENST00000572205 RRHO14718 337 aa6.77□□□□□ -1.33
SMG6-210ENST00000572205 ARPC1BO15143 372 aaKnown RBP6.77□□□□□ -1.33
SMG6-210ENST00000572205 HSPA12AO43301 675 aa6.77□□□□□ -1.33
SMG6-210ENST00000572205 SPDEFO95238 335 aa6.77□□□□□ -1.33
SMG6-210ENST00000572205 OR8U9P0C7N5 309 aa6.77□□□□□ -1.33
SMG6-210ENST00000572205 NFYAP23511 347 aaPredicted RBP6.77□□□□□ -1.33
SMG6-210ENST00000572205 FHL3Q13643 280 aa6.77□□□□□ -1.33
SMG6-210ENST00000572205 ARFRP1Q13795 201 aa6.77□□□□□ -1.33
SMG6-210ENST00000572205 SPCS2Q15005 226 aa6.77□□□□□ -1.33
SMG6-210ENST00000572205 ARL6IP1Q15041 203 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms