RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 ARL6IP1Q15041 203 aa13.88□□□□□ -0.19
CTDNEP1-207ENST00000572043 PDPNQ86YL7 162 aa13.88□□□□□ -0.19
CTDNEP1-207ENST00000572043 RNF152Q8N8N0 203 aa13.88□□□□□ -0.19
CTDNEP1-207ENST00000572043 FLYWCH2Q96CP2 140 aaKnown RBP13.88□□□□□ -0.19
CTDNEP1-207ENST00000572043 TOLLIPQ9H0E2 274 aa13.88□□□□□ -0.19
CTDNEP1-207ENST00000572043 TPSG1Q9NRR2 321 aa13.88□□□□□ -0.19
CTDNEP1-207ENST00000572043 RHBDL2Q9NX52 303 aa13.88□□□□□ -0.19
CTDNEP1-207ENST00000572043 ZNF580Q9UK33 172 aa13.88□□□□□ -0.19
CTDNEP1-207ENST00000572043 PLXNB1O43157 2135 aa13.87□□□□□ -0.19
CTDNEP1-207ENST00000572043 SLC25A17O43808 307 aa13.87□□□□□ -0.19
CTDNEP1-207ENST00000572043 CA2P00918 260 aa13.87□□□□□ -0.19
CTDNEP1-207ENST00000572043 LSM3P62310 102 aaKnown RBP13.87□□□□□ -0.19
CTDNEP1-207ENST00000572043 ZNF260Q3ZCT1 412 aa13.87□□□□□ -0.19
CTDNEP1-207ENST00000572043 ZNF660Q6AZW8 331 aaPredicted RBP13.87□□□□□ -0.19
CTDNEP1-207ENST00000572043 H1FOOQ8IZA3 346 aaPredicted RBP13.87□□□□□ -0.19
CTDNEP1-207ENST00000572043 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.87□□□□□ -0.19
CTDNEP1-207ENST00000572043 TSPAN14Q8NG11 270 aa13.87□□□□□ -0.19
CTDNEP1-207ENST00000572043 C4orf3Q8WVX3 66 aa13.87□□□□□ -0.19
CTDNEP1-207ENST00000572043 TSNAXQ99598 290 aaKnown RBP13.87□□□□□ -0.19
CTDNEP1-207ENST00000572043 GNB4Q9HAV0 340 aa13.87□□□□□ -0.19
CTDNEP1-207ENST00000572043 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.87□□□□□ -0.19
CTDNEP1-207ENST00000572043 NFYAP23511 347 aaPredicted RBP13.86□□□□□ -0.19
CTDNEP1-207ENST00000572043 GNB1P62873 340 aa13.86□□□□□ -0.19
CTDNEP1-207ENST00000572043 SRSF7Q16629 238 aaKnown RBP eCLIP13.86□□□□□ -0.19
CTDNEP1-207ENST00000572043 BVESQ8NE79 360 aa13.86□□□□□ -0.19
CTDNEP1-207ENST00000572043 DPF1Q92782 380 aa13.86□□□□□ -0.19
CTDNEP1-207ENST00000572043 SLC25A38Q96DW6 304 aa13.86□□□□□ -0.19
CTDNEP1-207ENST00000572043 RNF5Q99942 180 aa13.86□□□□□ -0.19
CTDNEP1-207ENST00000572043 TRAV18A0A075B6X5 111 aa13.85□□□□□ -0.19
CTDNEP1-207ENST00000572043 SSX5O60225 188 aa13.85□□□□□ -0.19
CTDNEP1-207ENST00000572043 SOX15O60248 233 aa13.85□□□□□ -0.19
CTDNEP1-207ENST00000572043 SCGNO76038 276 aa13.85□□□□□ -0.19
CTDNEP1-207ENST00000572043 DIRAS3O95661 229 aa13.85□□□□□ -0.19
CTDNEP1-207ENST00000572043 IGLV1-40P01703 118 aa13.85□□□□□ -0.19
CTDNEP1-207ENST00000572043 FCER2P06734 321 aa13.85□□□□□ -0.19
CTDNEP1-207ENST00000572043 EGR2P11161 476 aaPredicted RBP13.85□□□□□ -0.19
CTDNEP1-207ENST00000572043 RAB9AP51151 201 aa13.85□□□□□ -0.19
CTDNEP1-207ENST00000572043 KIAA0141Q14154 515 aaPredicted RBP13.85□□□□□ -0.19
CTDNEP1-207ENST00000572043 UNQ5815/PRO19632Q6UWF5 114 aa13.85□□□□□ -0.19
CTDNEP1-207ENST00000572043 Q6ZS49 121 aa13.85□□□□□ -0.19
CTDNEP1-207ENST00000572043 PPP1R27Q86WC6 154 aa13.85□□□□□ -0.19
CTDNEP1-207ENST00000572043 ZNF491Q8N8L2 437 aa13.85□□□□□ -0.19
CTDNEP1-207ENST00000572043 MINDY2Q8NBR6 621 aa13.85□□□□□ -0.19
CTDNEP1-207ENST00000572043 OR11H1Q8NG94 326 aa13.85□□□□□ -0.19
CTDNEP1-207ENST00000572043 GRPEL2Q8TAA5 225 aa13.85□□□□□ -0.19
CTDNEP1-207ENST00000572043 MCRIP2Q9BUT9 160 aaKnown RBP13.85□□□□□ -0.19
CTDNEP1-207ENST00000572043 A0A087WXM4 84 aa13.84□□□□□ -0.19
CTDNEP1-207ENST00000572043 AIREO43918 545 aa13.84□□□□□ -0.19
CTDNEP1-207ENST00000572043 TNFAIP8O95379 198 aa13.84□□□□□ -0.19
CTDNEP1-207ENST00000572043 PITPNAQ00169 270 aa13.84□□□□□ -0.19
CTDNEP1-207ENST00000572043 LFNGQ8NES3 379 aa13.84□□□□□ -0.19
CTDNEP1-207ENST00000572043 MYOZ3Q8TDC0 251 aa13.84□□□□□ -0.19
CTDNEP1-207ENST00000572043 UBE2E2Q96LR5 201 aa13.84□□□□□ -0.19
CTDNEP1-207ENST00000572043 HARBI1Q96MB7 349 aa13.84□□□□□ -0.19
CTDNEP1-207ENST00000572043 MS4A10Q96PG2 267 aa13.84□□□□□ -0.19
CTDNEP1-207ENST00000572043 ALX4Q9H161 411 aaPredicted RBP13.84□□□□□ -0.19
CTDNEP1-207ENST00000572043 DCSTAMPQ9H295 470 aa13.84□□□□□ -0.19
CTDNEP1-207ENST00000572043 VCX3AQ9NNX9 186 aa13.84□□□□□ -0.19
CTDNEP1-207ENST00000572043 FOXA2Q9Y261 457 aaPredicted RBP13.84□□□□□ -0.19
CTDNEP1-207ENST00000572043 VSIG4Q9Y279 399 aa13.84□□□□□ -0.19
CTDNEP1-207ENST00000572043 ETV7Q9Y603 341 aa13.84□□□□□ -0.19
CTDNEP1-207ENST00000572043 WI2-2373I1.2A0A1W2PRP0 233 aa13.83□□□□□ -0.2
CTDNEP1-207ENST00000572043 K7EIL1 84 aa13.83□□□□□ -0.2
CTDNEP1-207ENST00000572043 SHOXO15266 292 aa13.83□□□□□ -0.2
CTDNEP1-207ENST00000572043 SPDEFO95238 335 aa13.83□□□□□ -0.2
CTDNEP1-207ENST00000572043 LUMP51884 338 aaPredicted RBP13.83□□□□□ -0.2
CTDNEP1-207ENST00000572043 PJVKQ0ZLH3 352 aa13.83□□□□□ -0.2
CTDNEP1-207ENST00000572043 CBX3Q13185 183 aa13.83□□□□□ -0.2
CTDNEP1-207ENST00000572043 FXYD3Q14802 87 aa13.83□□□□□ -0.2
CTDNEP1-207ENST00000572043 RTL8BQ17RB0 113 aa13.83□□□□□ -0.2
CTDNEP1-207ENST00000572043 TIMM50Q3ZCQ8 353 aa13.83□□□□□ -0.2
CTDNEP1-207ENST00000572043 ACTBL2Q562R1 376 aa13.83□□□□□ -0.2
CTDNEP1-207ENST00000572043 C19orf54Q5BKX5 351 aa13.83□□□□□ -0.2
CTDNEP1-207ENST00000572043 ZNF562Q6V9R5 426 aa13.83□□□□□ -0.2
CTDNEP1-207ENST00000572043 OR5M8Q8NGP6 311 aa13.83□□□□□ -0.2
CTDNEP1-207ENST00000572043 ARPC1AQ92747 370 aa13.83□□□□□ -0.2
CTDNEP1-207ENST00000572043 YIPF6Q96EC8 236 aa13.83□□□□□ -0.2
CTDNEP1-207ENST00000572043 GPR61Q9BZJ8 451 aa13.83□□□□□ -0.2
CTDNEP1-207ENST00000572043 NUBP2Q9Y5Y2 271 aa13.83□□□□□ -0.2
CTDNEP1-207ENST00000572043 ARPC1BO15143 372 aaKnown RBP13.82□□□□□ -0.2
CTDNEP1-207ENST00000572043 CNIH1O95406 144 aa13.82□□□□□ -0.2
CTDNEP1-207ENST00000572043 IGLV2-23P01705 113 aa13.82□□□□□ -0.2
CTDNEP1-207ENST00000572043 CTXN2P0C2S0 81 aa13.82□□□□□ -0.2
CTDNEP1-207ENST00000572043 PTHLHP12272 177 aa13.82□□□□□ -0.2
CTDNEP1-207ENST00000572043 DUTP33316 252 aaKnown RBP13.82□□□□□ -0.2
CTDNEP1-207ENST00000572043 CRIP2P52943 208 aaPredicted RBP13.82□□□□□ -0.2
CTDNEP1-207ENST00000572043 TMEM267Q0VDI3 215 aaPredicted RBP13.82□□□□□ -0.2
CTDNEP1-207ENST00000572043 DEFB121Q5J5C9 76 aa13.82□□□□□ -0.2
CTDNEP1-207ENST00000572043 CNIH2Q6PI25 160 aa13.82□□□□□ -0.2
CTDNEP1-207ENST00000572043 GVQW1Q8N7I0 195 aa13.82□□□□□ -0.2
CTDNEP1-207ENST00000572043 OR1N2Q8NGR9 330 aa13.82□□□□□ -0.2
CTDNEP1-207ENST00000572043 ANXA10Q9UJ72 324 aa13.82□□□□□ -0.2
CTDNEP1-207ENST00000572043 IGKV1D-13A0A0B4J2D9 117 aa13.81□□□□□ -0.2
CTDNEP1-207ENST00000572043 SRRM4A7MD48 611 aaKnown RBP13.81□□□□□ -0.2
CTDNEP1-207ENST00000572043 LINC00473A8K010 186 aa13.81□□□□□ -0.2
CTDNEP1-207ENST00000572043 TUSC2O75896 110 aa13.81□□□□□ -0.2
CTDNEP1-207ENST00000572043 CRYZL1O95825 349 aa13.81□□□□□ -0.2
CTDNEP1-207ENST00000572043 IGHV3-11P01762 117 aa13.81□□□□□ -0.2
CTDNEP1-207ENST00000572043 IGKV1-13P0DP09 117 aa13.81□□□□□ -0.2
CTDNEP1-207ENST00000572043 SCAND1P57086 179 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms