RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 TUSC2O75896 110 aa10.6□□□□□ -0.71
CCDC40-205ENST00000571028 TPPPO94811 219 aa10.6□□□□□ -0.71
CCDC40-205ENST00000571028 PPYP01298 95 aa10.6□□□□□ -0.71
CCDC40-205ENST00000571028 CD3DP04234 171 aa10.6□□□□□ -0.71
CCDC40-205ENST00000571028 IFNA6P05013 189 aa10.6□□□□□ -0.71
CCDC40-205ENST00000571028 ZNF137PP52743 207 aa10.6□□□□□ -0.71
CCDC40-205ENST00000571028 HERV-K104P61576 105 aa10.6□□□□□ -0.71
CCDC40-205ENST00000571028 MRPS10P82664 201 aaKnown RBP10.6□□□□□ -0.71
CCDC40-205ENST00000571028 RNASE10Q5GAN6 216 aaKnown RBP10.6□□□□□ -0.71
CCDC40-205ENST00000571028 SPANXN2Q5MJ10 180 aa10.6□□□□□ -0.71
CCDC40-205ENST00000571028 ZNF833PQ6ZTB9 187 aa10.6□□□□□ -0.71
CCDC40-205ENST00000571028 CCDC190Q86UF4 302 aa10.6□□□□□ -0.71
CCDC40-205ENST00000571028 SMIM4Q8WVI0 70 aa10.6□□□□□ -0.71
CCDC40-205ENST00000571028 NABP2Q9BQ15 211 aa10.6□□□□□ -0.71
CCDC40-205ENST00000571028 ZNF251Q9BRH9 671 aa10.6□□□□□ -0.71
CCDC40-205ENST00000571028 TINAGL1Q9GZM7 467 aaPredicted RBP10.6□□□□□ -0.71
CCDC40-205ENST00000571028 SLC5A7Q9GZV3 580 aa10.6□□□□□ -0.71
CCDC40-205ENST00000571028 CCL28Q9NRJ3 127 aa10.6□□□□□ -0.71
CCDC40-205ENST00000571028 SDHAF2Q9NX18 166 aa10.6□□□□□ -0.71
CCDC40-205ENST00000571028 MTFP1Q9UDX5 166 aa10.6□□□□□ -0.71
CCDC40-205ENST00000571028 V9GYH0 126 aa10.6□□□□□ -0.71
CCDC40-205ENST00000571028 H7C2Y5 167 aa10.59□□□□□ -0.71
CCDC40-205ENST00000571028 CTDSPLO15194 276 aa10.59□□□□□ -0.71
CCDC40-205ENST00000571028 PROP1O75360 226 aa10.59□□□□□ -0.71
CCDC40-205ENST00000571028 PEX14O75381 377 aa10.59□□□□□ -0.71
CCDC40-205ENST00000571028 FBXO24O75426 580 aa10.59□□□□□ -0.71
CCDC40-205ENST00000571028 RAB3DO95716 219 aa10.59□□□□□ -0.71
CCDC40-205ENST00000571028 CT45A6P0DMU7 189 aa10.59□□□□□ -0.71
CCDC40-205ENST00000571028 CT45A5P0DMU8 189 aa10.59□□□□□ -0.71
CCDC40-205ENST00000571028 CT45A7P0DMV0 189 aa10.59□□□□□ -0.71
CCDC40-205ENST00000571028 CD33P20138 364 aa10.59□□□□□ -0.71
CCDC40-205ENST00000571028 LSAMPQ13449 338 aa10.59□□□□□ -0.71
CCDC40-205ENST00000571028 DYRK1AQ13627 763 aa10.59□□□□□ -0.71
CCDC40-205ENST00000571028 C9orf152Q5JTZ5 239 aa10.59□□□□□ -0.71
CCDC40-205ENST00000571028 FAAP20Q6NZ36 180 aa10.59□□□□□ -0.71
CCDC40-205ENST00000571028 OVCH2Q7RTZ1 564 aa10.59□□□□□ -0.71
CCDC40-205ENST00000571028 OR6F1Q8NGZ6 308 aa10.59□□□□□ -0.71
CCDC40-205ENST00000571028 OR2T10Q8NGZ9 312 aa10.59□□□□□ -0.71
CCDC40-205ENST00000571028 C5orf30Q96GV9 206 aa10.59□□□□□ -0.71
CCDC40-205ENST00000571028 EAF1Q96JC9 268 aaPredicted RBP10.59□□□□□ -0.71
CCDC40-205ENST00000571028 SOSTQ9BQB4 213 aa10.59□□□□□ -0.71
CCDC40-205ENST00000571028 SLC25A33Q9BSK2 321 aa10.59□□□□□ -0.71
CCDC40-205ENST00000571028 THAP7Q9BT49 309 aaPredicted RBP10.59□□□□□ -0.71
CCDC40-205ENST00000571028 RABL2AQ9UBK7 228 aaPredicted RBP10.59□□□□□ -0.71
CCDC40-205ENST00000571028 RABL2BQ9UNT1 228 aa10.59□□□□□ -0.71
CCDC40-205ENST00000571028 PLXNB1O43157 2135 aa10.58□□□□□ -0.72
CCDC40-205ENST00000571028 NCBP2LA6PVI3 153 aaKnown RBP10.58□□□□□ -0.72
CCDC40-205ENST00000571028 TNFSF12O43508 249 aa10.58□□□□□ -0.72
CCDC40-205ENST00000571028 MOSP00540 346 aa10.58□□□□□ -0.72
CCDC40-205ENST00000571028 CD1BP29016 333 aa10.58□□□□□ -0.72
CCDC40-205ENST00000571028 TAS2R19P59542 299 aa10.58□□□□□ -0.72
CCDC40-205ENST00000571028 ZNF79Q15937 498 aa10.58□□□□□ -0.72
CCDC40-205ENST00000571028 SCGB2B2Q4G0G5 96 aa10.58□□□□□ -0.72
CCDC40-205ENST00000571028 ACTBL2Q562R1 376 aa10.58□□□□□ -0.72
CCDC40-205ENST00000571028 ARSJQ5FYB0 599 aaPredicted RBP10.58□□□□□ -0.72
CCDC40-205ENST00000571028 OR2B11Q5JQS5 317 aa10.58□□□□□ -0.72
CCDC40-205ENST00000571028 THNSL2Q86YJ6 484 aa10.58□□□□□ -0.72
CCDC40-205ENST00000571028 ZNF645Q8N7E2 425 aa10.58□□□□□ -0.72
CCDC40-205ENST00000571028 ZNF383Q8NA42 475 aa10.58□□□□□ -0.72
CCDC40-205ENST00000571028 TMEM229BQ8NBD8 167 aa10.58□□□□□ -0.72
CCDC40-205ENST00000571028 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.58□□□□□ -0.72
CCDC40-205ENST00000571028 OR4D10Q8NGI6 311 aa10.58□□□□□ -0.72
CCDC40-205ENST00000571028 GIMAP1Q8WWP7 306 aa10.58□□□□□ -0.72
CCDC40-205ENST00000571028 GPHA2Q96T91 129 aa10.58□□□□□ -0.72
CCDC40-205ENST00000571028 GHITMQ9H3K2 345 aa10.58□□□□□ -0.72
CCDC40-205ENST00000571028 RAB18Q9NP72 206 aa10.58□□□□□ -0.72
CCDC40-205ENST00000571028 FAM90A9PA6NNJ1 464 aa10.57□□□□□ -0.72
CCDC40-205ENST00000571028 H0YJW9 148 aa10.57□□□□□ -0.72
CCDC40-205ENST00000571028 K7EIL1 84 aa10.57□□□□□ -0.72
CCDC40-205ENST00000571028 GSTZ1O43708 216 aaPredicted RBP10.57□□□□□ -0.72
CCDC40-205ENST00000571028 FAM71F2Q6NXP2 309 aa10.57□□□□□ -0.72
CCDC40-205ENST00000571028 STEAP1BQ6NZ63 245 aa10.57□□□□□ -0.72
CCDC40-205ENST00000571028 DHRS11Q6UWP2 260 aa10.57□□□□□ -0.72
CCDC40-205ENST00000571028 LIAT1Q6ZQX7 453 aa10.57□□□□□ -0.72
CCDC40-205ENST00000571028 NDUFA11Q86Y39 141 aa10.57□□□□□ -0.72
CCDC40-205ENST00000571028 Q8N402 240 aa10.57□□□□□ -0.72
CCDC40-205ENST00000571028 RBM14Q96PK6 669 aaKnown RBP10.57□□□□□ -0.72
CCDC40-205ENST00000571028 NPFFR1Q9GZQ6 430 aa10.57□□□□□ -0.72
CCDC40-205ENST00000571028 RANBP3Q9H6Z4 567 aaPredicted RBP10.57□□□□□ -0.72
CCDC40-205ENST00000571028 SLC35D1Q9NTN3 355 aa10.57□□□□□ -0.72
CCDC40-205ENST00000571028 TAS2R8Q9NYW2 309 aa10.57□□□□□ -0.72
CCDC40-205ENST00000571028 RBMX2Q9Y388 322 aaKnown RBP10.57□□□□□ -0.72
CCDC40-205ENST00000571028 OR2F2O95006 317 aa10.56□□□□□ -0.72
CCDC40-205ENST00000571028 APOA2P02652 100 aa10.56□□□□□ -0.72
CCDC40-205ENST00000571028 AMY2AP04746 511 aa10.56□□□□□ -0.72
CCDC40-205ENST00000571028 PGAM2P15259 253 aa10.56□□□□□ -0.72
CCDC40-205ENST00000571028 IGLL1P15814 213 aa10.56□□□□□ -0.72
CCDC40-205ENST00000571028 INPP1P49441 399 aa10.56□□□□□ -0.72
CCDC40-205ENST00000571028 RPS16P62249 146 aaKnown RBP10.56□□□□□ -0.72
CCDC40-205ENST00000571028 BLCAPP62952 87 aa10.56□□□□□ -0.72
CCDC40-205ENST00000571028 HABP2Q14520 560 aaPredicted RBP10.56□□□□□ -0.72
CCDC40-205ENST00000571028 MMDQ15546 238 aa10.56□□□□□ -0.72
CCDC40-205ENST00000571028 ABCA11PQ4W5N1 156 aa10.56□□□□□ -0.72
CCDC40-205ENST00000571028 BVESQ8NE79 360 aa10.56□□□□□ -0.72
CCDC40-205ENST00000571028 TCTEX1D2Q8WW35 142 aa10.56□□□□□ -0.72
CCDC40-205ENST00000571028 AKR1E2Q96JD6 320 aa10.56□□□□□ -0.72
CCDC40-205ENST00000571028 RITA1Q96K30 269 aa10.56□□□□□ -0.72
CCDC40-205ENST00000571028 FXYD6Q9H0Q3 95 aa10.56□□□□□ -0.72
CCDC40-205ENST00000571028 MCUBQ9NWR8 336 aa10.56□□□□□ -0.72
CCDC40-205ENST00000571028 GAB2Q9UQC2 676 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms