RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 IFNA2P01563 188 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 IGHV4-38-2P0DP08 117 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 RRASP10301 218 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 ANXA7P20073 488 aaKnown RBP5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 GNRHRP30968 328 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 BRS3P32247 399 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 ZNF134P52741 427 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 ZNF137PP52743 207 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 ERVK-16P61578 105 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 RND3P61587 244 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 ZNF816Q0VGE8 651 aaPredicted RBP5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 OXA1LQ15070 435 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 SSX2Q16385 188 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 TMEM128Q5BJH2 165 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 OR2B11Q5JQS5 317 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 FAM120AOSQ5T036 256 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 UTF1Q5T230 341 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 HCP5Q6MZN7 132 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 CCBE1Q6UXH8 406 aaPredicted RBP5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 RBMS3Q6XE24 437 aaKnown RBP5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 LHFPL4Q7Z7J7 247 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 TBC1D26Q86UD7 250 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 DRAXINQ8NBI3 349 aaPredicted RBP5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 DUSP18Q8NEJ0 188 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 OR4S2Q8NH73 311 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 COQ8AQ8NI60 647 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 CD300LFQ8TDQ1 290 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 CASTOR1Q8WTX7 329 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 CHPT1Q8WUD6 406 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 CAPSLQ8WWF8 208 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 MALSU1Q96EH3 234 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 AGMATQ9BSE5 352 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 BEX2Q9BXY8 128 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 C5orf66Q9H5L9 145 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 NAA60Q9H7X0 242 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 BEX1Q9HBH7 125 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 GPR132Q9UNW8 380 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 FLVCR2Q9UPI3 526 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 LRBAP50851 2863 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 CENPEQ02224 2701 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 POLQO75417 2590 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 CSMD2Q7Z408 3487 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 CELSR2Q9HCU4 2923 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 APCP25054 2843 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 IGHV1-3A0A0C4DH29 117 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 A0A0U1RQK1 487 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 CRYM-AS1A6NIL9 109 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 TIMM23O14925 209 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 MPPED1O15442 326 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 SSNA1O43805 119 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 FCGR3BO75015 233 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 PGLYRP1O75594 196 aaPredicted RBP5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 OR5AC1P0C628 307 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 OR4E1P0C645 316 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 F2RP25116 425 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 MC5RP33032 325 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 DUTP33316 252 aaKnown RBP5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 AKR1C2P52895 323 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 RAG2P55895 527 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 DHODHQ02127 395 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 PPP1R1AQ13522 171 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 HES1Q14469 280 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 SLC9A3R2Q15599 337 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 TATDN3Q17R31 274 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 DHRS7BQ6IAN0 325 aaPredicted RBP5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 GLDNQ6ZMI3 551 aaPredicted RBP5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 IL17RELQ6ZVW7 336 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 LYG2Q86SG7 212 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 SLC25A42Q86VD7 318 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 PDPNQ86YL7 162 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 ODF3L1Q8IXM7 274 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 SPAG16Q8N0X2 631 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 TCTEX1D1Q8N7M0 179 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 ADAD2Q8NCV1 583 aaKnown RBP5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 MRGPRFQ96AM1 343 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 HARBI1Q96MB7 349 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 PHB2Q99623 299 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 MARVELD1Q9BSK0 173 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 SLC35D1Q9NTN3 355 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 TMEM160Q9NX00 188 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 CDC42EP3Q9UKI2 254 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 GAB2Q9UQC2 676 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 WASHC3Q9Y3C0 194 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 CRYBG3Q68DQ2 2970 aa5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 ASH1LQ9NR48 2969 aaKnown RBP5.33□□□□□ -1.56
CTDNEP1-204ENST00000570484 IGHV3-72A0A0B4J1Y9 119 aa5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 A0A1W2PPI3 338 aa5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 H0YJW9 148 aa5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 SHOXO15266 292 aa5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 RBFOX2O43251 390 aaKnown RBP eCLIP5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 SFT2D2O95562 160 aa5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 CRYZL1O95825 349 aa5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 LY6G6DO95868 133 aa5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 IGKV1D-33P01593 117 aa5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 IGKV1-33P01594 117 aa5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 IGLV2-14P01704 120 aa5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 FAM106CPP0CH98 169 aa5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 RPA2P15927 270 aa5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 SPNP16150 400 aa5.32□□□□□ -1.56
CTDNEP1-204ENST00000570484 SRD5A1P18405 259 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms