RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 LGALS7P47929 136 aa13.25□□□□□ -0.29
MAP1LC3B-208ENST00000570189 RAB25P57735 213 aa13.25□□□□□ -0.29
MAP1LC3B-208ENST00000570189 PLGLAQ15195 96 aa13.25□□□□□ -0.29
MAP1LC3B-208ENST00000570189 C22orf42Q6IC83 251 aa13.25□□□□□ -0.29
MAP1LC3B-208ENST00000570189 OR10J5Q8NHC4 309 aa13.25□□□□□ -0.29
MAP1LC3B-208ENST00000570189 Q9H521 79 aa13.25□□□□□ -0.29
MAP1LC3B-208ENST00000570189 SLA2Q9H6Q3 261 aa13.25□□□□□ -0.29
MAP1LC3B-208ENST00000570189 TPSG1Q9NRR2 321 aa13.25□□□□□ -0.29
MAP1LC3B-208ENST00000570189 METTL1Q9UBP6 276 aaKnown RBP13.25□□□□□ -0.29
MAP1LC3B-208ENST00000570189 A0A1W2PN81 502 aa13.24□□□□□ -0.29
MAP1LC3B-208ENST00000570189 NOTOA8MTQ0 251 aa13.24□□□□□ -0.29
MAP1LC3B-208ENST00000570189 ARPC1BO15143 372 aaKnown RBP13.24□□□□□ -0.29
MAP1LC3B-208ENST00000570189 BRI3O95415 125 aa13.24□□□□□ -0.29
MAP1LC3B-208ENST00000570189 GSTT2P0CG29 244 aa13.24□□□□□ -0.29
MAP1LC3B-208ENST00000570189 GSTT2BP0CG30 244 aa13.24□□□□□ -0.29
MAP1LC3B-208ENST00000570189 GNB3P16520 340 aa13.24□□□□□ -0.29
MAP1LC3B-208ENST00000570189 CHRNA7P36544 502 aa13.24□□□□□ -0.29
MAP1LC3B-208ENST00000570189 GNB1P62873 340 aa13.24□□□□□ -0.29
MAP1LC3B-208ENST00000570189 ECSCRQ19T08 205 aa13.24□□□□□ -0.29
MAP1LC3B-208ENST00000570189 IGSF11Q5DX21 431 aa13.24□□□□□ -0.29
MAP1LC3B-208ENST00000570189 DEFB121Q5J5C9 76 aa13.24□□□□□ -0.29
MAP1LC3B-208ENST00000570189 PPP1R27Q86WC6 154 aa13.24□□□□□ -0.29
MAP1LC3B-208ENST00000570189 DRAXINQ8NBI3 349 aaPredicted RBP13.24□□□□□ -0.29
MAP1LC3B-208ENST00000570189 FLYWCH2Q96CP2 140 aaKnown RBP13.24□□□□□ -0.29
MAP1LC3B-208ENST00000570189 TXNL4BQ9NX01 149 aaKnown RBP13.24□□□□□ -0.29
MAP1LC3B-208ENST00000570189 SDHAF2Q9NX18 166 aa13.24□□□□□ -0.29
MAP1LC3B-208ENST00000570189 STUB1Q9UNE7 303 aa13.24□□□□□ -0.29
MAP1LC3B-208ENST00000570189 LSM4Q9Y4Z0 139 aaKnown RBP13.24□□□□□ -0.29
MAP1LC3B-208ENST00000570189 H3BUA1 57 aa13.23□□□□□ -0.29
MAP1LC3B-208ENST00000570189 SCGNO76038 276 aa13.23□□□□□ -0.29
MAP1LC3B-208ENST00000570189 IGLV2-23P01705 113 aa13.23□□□□□ -0.29
MAP1LC3B-208ENST00000570189 CRYGBP07316 175 aa13.23□□□□□ -0.29
MAP1LC3B-208ENST00000570189 LGALS1P09382 135 aaKnown RBP13.23□□□□□ -0.29
MAP1LC3B-208ENST00000570189 SCAND1P57086 179 aa13.23□□□□□ -0.29
MAP1LC3B-208ENST00000570189 RPS16P62249 146 aaKnown RBP13.23□□□□□ -0.29
MAP1LC3B-208ENST00000570189 TMEM177Q53S58 311 aa13.23□□□□□ -0.29
MAP1LC3B-208ENST00000570189 ACTBL2Q562R1 376 aa13.23□□□□□ -0.29
MAP1LC3B-208ENST00000570189 VAX1Q5SQQ9 334 aa13.23□□□□□ -0.29
MAP1LC3B-208ENST00000570189 H1FOOQ8IZA3 346 aaPredicted RBP13.23□□□□□ -0.29
MAP1LC3B-208ENST00000570189 TMEM68Q96MH6 324 aa13.23□□□□□ -0.29
MAP1LC3B-208ENST00000570189 OR2D2Q9H210 308 aa13.23□□□□□ -0.29
MAP1LC3B-208ENST00000570189 SLC35D1Q9NTN3 355 aa13.23□□□□□ -0.29
MAP1LC3B-208ENST00000570189 TNCP24821 2201 aa13.23□□□□□ -0.29
MAP1LC3B-208ENST00000570189 M0R1X1 148 aa13.22□□□□□ -0.29
MAP1LC3B-208ENST00000570189 BET1O15155 118 aa13.22□□□□□ -0.29
MAP1LC3B-208ENST00000570189 CA2P00918 260 aa13.22□□□□□ -0.29
MAP1LC3B-208ENST00000570189 OR8U9P0C7N5 309 aa13.22□□□□□ -0.29
MAP1LC3B-208ENST00000570189 RRASP10301 218 aa13.22□□□□□ -0.29
MAP1LC3B-208ENST00000570189 LINC00205P59089 165 aa13.22□□□□□ -0.29
MAP1LC3B-208ENST00000570189 SSBP2P81877 361 aaPredicted RBP13.22□□□□□ -0.29
MAP1LC3B-208ENST00000570189 ZNF429Q86V71 674 aa13.22□□□□□ -0.29
MAP1LC3B-208ENST00000570189 DDB2Q92466 427 aa13.22□□□□□ -0.29
MAP1LC3B-208ENST00000570189 ARPC1AQ92747 370 aa13.22□□□□□ -0.29
MAP1LC3B-208ENST00000570189 C5orf30Q96GV9 206 aa13.22□□□□□ -0.29
MAP1LC3B-208ENST00000570189 ADTRPQ96IZ2 230 aa13.22□□□□□ -0.29
MAP1LC3B-208ENST00000570189 DCSTAMPQ9H295 470 aa13.22□□□□□ -0.29
MAP1LC3B-208ENST00000570189 A0A0B4J203 849 aa13.21□□□□□ -0.29
MAP1LC3B-208ENST00000570189 PSMB9P28065 219 aa13.21□□□□□ -0.29
MAP1LC3B-208ENST00000570189 CD69Q07108 199 aa13.21□□□□□ -0.29
MAP1LC3B-208ENST00000570189 ZNF260Q3ZCT1 412 aa13.21□□□□□ -0.29
MAP1LC3B-208ENST00000570189 HACD4Q5VWC8 232 aa13.21□□□□□ -0.29
MAP1LC3B-208ENST00000570189 UNQ5815/PRO19632Q6UWF5 114 aa13.21□□□□□ -0.29
MAP1LC3B-208ENST00000570189 LFNGQ8NES3 379 aa13.21□□□□□ -0.29
MAP1LC3B-208ENST00000570189 ZNF230Q9UIE0 474 aaPredicted RBP13.21□□□□□ -0.29
MAP1LC3B-208ENST00000570189 LINC01619G3V211 115 aa13.2□□□□□ -0.3
MAP1LC3B-208ENST00000570189 OVOL1O14753 267 aa13.2□□□□□ -0.3
MAP1LC3B-208ENST00000570189 SLC25A17O43808 307 aa13.2□□□□□ -0.3
MAP1LC3B-208ENST00000570189 CTXN2P0C2S0 81 aa13.2□□□□□ -0.3
MAP1LC3B-208ENST00000570189 NHLRC4P0CG21 123 aaPredicted RBP13.2□□□□□ -0.3
MAP1LC3B-208ENST00000570189 CD40LGP29965 261 aa13.2□□□□□ -0.3
MAP1LC3B-208ENST00000570189 TALDO1P37837 337 aa13.2□□□□□ -0.3
MAP1LC3B-208ENST00000570189 PITPNAQ00169 270 aa13.2□□□□□ -0.3
MAP1LC3B-208ENST00000570189 ARFRP1Q13795 201 aa13.2□□□□□ -0.3
MAP1LC3B-208ENST00000570189 FXYD3Q14802 87 aa13.2□□□□□ -0.3
MAP1LC3B-208ENST00000570189 ZNF773Q6PK81 442 aa13.2□□□□□ -0.3
MAP1LC3B-208ENST00000570189 DCUN1D4Q92564 292 aa13.2□□□□□ -0.3
MAP1LC3B-208ENST00000570189 RHOVQ96L33 236 aa13.2□□□□□ -0.3
MAP1LC3B-208ENST00000570189 GINS4Q9BRT9 223 aa13.2□□□□□ -0.3
MAP1LC3B-208ENST00000570189 ATG5Q9H1Y0 275 aa13.2□□□□□ -0.3
MAP1LC3B-208ENST00000570189 ZNF256Q9Y2P7 627 aaPredicted RBP13.2□□□□□ -0.3
MAP1LC3B-208ENST00000570189 A0A075B6Q4 140 aa13.19□□□□□ -0.3
MAP1LC3B-208ENST00000570189 IGKV1D-8A0A087WSZ0 117 aa13.19□□□□□ -0.3
MAP1LC3B-208ENST00000570189 TMEM127O75204 238 aa13.19□□□□□ -0.3
MAP1LC3B-208ENST00000570189 DUTP33316 252 aaKnown RBP13.19□□□□□ -0.3
MAP1LC3B-208ENST00000570189 CBX3Q13185 183 aa13.19□□□□□ -0.3
MAP1LC3B-208ENST00000570189 RTL8BQ17RB0 113 aa13.19□□□□□ -0.3
MAP1LC3B-208ENST00000570189 CDNFQ49AH0 187 aa13.19□□□□□ -0.3
MAP1LC3B-208ENST00000570189 SFXN4Q6P4A7 337 aa13.19□□□□□ -0.3
MAP1LC3B-208ENST00000570189 ABHD5Q8WTS1 349 aa13.19□□□□□ -0.3
MAP1LC3B-208ENST00000570189 MAFIPQ8WZ33 124 aa13.19□□□□□ -0.3
MAP1LC3B-208ENST00000570189 HARBI1Q96MB7 349 aa13.19□□□□□ -0.3
MAP1LC3B-208ENST00000570189 CLCC1Q96S66 551 aa13.19□□□□□ -0.3
MAP1LC3B-208ENST00000570189 FAM103A1Q9BTL3 118 aaKnown RBP13.19□□□□□ -0.3
MAP1LC3B-208ENST00000570189 SSR3Q9UNL2 185 aa13.19□□□□□ -0.3
MAP1LC3B-208ENST00000570189 A3GALT2U3KPV4 340 aa13.19□□□□□ -0.3
MAP1LC3B-208ENST00000570189 SLC22A5O76082 557 aa13.18□□□□□ -0.3
MAP1LC3B-208ENST00000570189 HSPB1P04792 205 aaKnown RBP13.18□□□□□ -0.3
MAP1LC3B-208ENST00000570189 SNRPBP14678 240 aaKnown RBP13.18□□□□□ -0.3
MAP1LC3B-208ENST00000570189 ECI1P42126 302 aa13.18□□□□□ -0.3
MAP1LC3B-208ENST00000570189 ACSM6Q6P461 480 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms