RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 TMEM147Q9BVK8 224 aa3.24□□□□□ -1.89
CHD9-220ENST00000569794 MAP1LC3BQ9GZQ8 125 aa3.24□□□□□ -1.89
CHD9-220ENST00000569794 MED28Q9H204 178 aa3.24□□□□□ -1.89
CHD9-220ENST00000569794 CXorf21Q9HAI6 301 aa3.24□□□□□ -1.89
CHD9-220ENST00000569794 PLSCR3Q9NRY6 295 aa3.24□□□□□ -1.89
CHD9-220ENST00000569794 CA10Q9NS85 328 aa3.24□□□□□ -1.89
CHD9-220ENST00000569794 MED29Q9NX70 200 aa3.24□□□□□ -1.89
CHD9-220ENST00000569794 DNAJC12Q9UKB3 198 aa3.24□□□□□ -1.89
CHD9-220ENST00000569794 SSR3Q9UNL2 185 aa3.24□□□□□ -1.89
CHD9-220ENST00000569794 NEU3Q9UQ49 428 aa3.24□□□□□ -1.89
CHD9-220ENST00000569794 TTC37Q6PGP7 1564 aa3.24□□□□□ -1.89
CHD9-220ENST00000569794 KIF24Q5T7B8 1368 aa3.24□□□□□ -1.89
CHD9-220ENST00000569794 CCDC88BA6NC98 1476 aa3.23□□□□□ -1.89
CHD9-220ENST00000569794 TCOF1Q13428 1488 aaKnown RBP3.23□□□□□ -1.89
CHD9-220ENST00000569794 RAPGEF2Q9Y4G8 1499 aa3.23□□□□□ -1.89
CHD9-220ENST00000569794 TRAV26-2A0A0B4J265 109 aa3.23□□□□□ -1.89
CHD9-220ENST00000569794 IGHV3-66A0A0C4DH42 116 aa3.23□□□□□ -1.89
CHD9-220ENST00000569794 TRAPPC13A5PLN9 417 aa3.23□□□□□ -1.89
CHD9-220ENST00000569794 C5orf63A6NC05 138 aa3.23□□□□□ -1.89
CHD9-220ENST00000569794 ZFP92A6NM28 416 aa3.23□□□□□ -1.89
CHD9-220ENST00000569794 TMEM250H0YL14 139 aa3.23□□□□□ -1.89
CHD9-220ENST00000569794 ORC5O43913 435 aa3.23□□□□□ -1.89
CHD9-220ENST00000569794 GPR75O95800 540 aa3.23□□□□□ -1.89
CHD9-220ENST00000569794 CXorf1O96002 111 aa3.23□□□□□ -1.89
CHD9-220ENST00000569794 HLA-DRB1P01911 266 aa3.23□□□□□ -1.89
CHD9-220ENST00000569794 SERPINE1P05121 402 aa3.23□□□□□ -1.89
CHD9-220ENST00000569794 HLA-DQB2P05538 268 aa3.23□□□□□ -1.89
CHD9-220ENST00000569794 C1GALT1C1LP0DN25 315 aa3.23□□□□□ -1.89
CHD9-220ENST00000569794 PSG2P11465 335 aa3.23□□□□□ -1.89
CHD9-220ENST00000569794 GABRA3P34903 492 aa3.23□□□□□ -1.89
CHD9-220ENST00000569794 GLRXP35754 106 aa3.23□□□□□ -1.89
CHD9-220ENST00000569794 SNRPD2P62316 118 aaKnown RBP3.23□□□□□ -1.89
CHD9-220ENST00000569794 DAZ2Q13117 558 aaKnown RBP3.23□□□□□ -1.89
CHD9-220ENST00000569794 FAM78AQ5JUQ0 283 aa3.23□□□□□ -1.89
CHD9-220ENST00000569794 EBLN2Q6P2I7 272 aa3.23□□□□□ -1.89
CHD9-220ENST00000569794 DAZ4Q86SG3 579 aaKnown RBP3.23□□□□□ -1.89
CHD9-220ENST00000569794 CEND1Q8N111 149 aa3.23□□□□□ -1.89
CHD9-220ENST00000569794 YIPF7Q8N8F6 280 aa3.23□□□□□ -1.89
CHD9-220ENST00000569794 OR8B12Q8NGG6 310 aa3.23□□□□□ -1.89
CHD9-220ENST00000569794 RNASE11Q8TAA1 199 aaKnown RBP3.23□□□□□ -1.89
CHD9-220ENST00000569794 C15orf40Q8WUR7 153 aa3.23□□□□□ -1.89
CHD9-220ENST00000569794 ROPN1LQ96C74 230 aa3.23□□□□□ -1.89
CHD9-220ENST00000569794 DERL3Q96Q80 235 aa3.23□□□□□ -1.89
CHD9-220ENST00000569794 PFDN5Q99471 154 aa3.23□□□□□ -1.89
CHD9-220ENST00000569794 RSPO3Q9BXY4 272 aaPredicted RBP3.23□□□□□ -1.89
CHD9-220ENST00000569794 PLEKHF2Q9H8W4 249 aa3.23□□□□□ -1.89
CHD9-220ENST00000569794 SND1-IT1Q9HBX3 110 aa3.23□□□□□ -1.89
CHD9-220ENST00000569794 DAZ1Q9NQZ3 744 aaKnown RBP3.23□□□□□ -1.89
CHD9-220ENST00000569794 DAZ3Q9NR90 486 aaKnown RBP3.23□□□□□ -1.89
CHD9-220ENST00000569794 SPANXA1Q9NS26 97 aa3.23□□□□□ -1.89
CHD9-220ENST00000569794 OR52A1Q9UKL2 312 aa3.23□□□□□ -1.89
CHD9-220ENST00000569794 PRNDQ9UKY0 176 aa3.23□□□□□ -1.89
CHD9-220ENST00000569794 PAIP2BQ9ULR5 123 aaKnown RBP3.23□□□□□ -1.89
CHD9-220ENST00000569794 ANAPC10Q9UM13 185 aa3.23□□□□□ -1.89
CHD9-220ENST00000569794 NCOA3Q9Y6Q9 1424 aa3.23□□□□□ -1.89
CHD9-220ENST00000569794 WIZO95785 1651 aa3.23□□□□□ -1.89
CHD9-220ENST00000569794 ARHGEF12Q9NZN5 1544 aa3.23□□□□□ -1.89
CHD9-220ENST00000569794 BRCA1P38398 1863 aaKnown RBP3.22□□□□□ -1.89
CHD9-220ENST00000569794 PLCH2O75038 1416 aa3.22□□□□□ -1.89
CHD9-220ENST00000569794 IGLV11-55A0A075B6I3 123 aa3.22□□□□□ -1.89
CHD9-220ENST00000569794 IGLV1-50A0A075B6I6 118 aa3.22□□□□□ -1.89
CHD9-220ENST00000569794 PRORSD1PA6NEY8 169 aa3.22□□□□□ -1.89
CHD9-220ENST00000569794 OR4C45A6NMZ5 311 aa3.22□□□□□ -1.89
CHD9-220ENST00000569794 SLC17A3O00476 420 aa3.22□□□□□ -1.89
CHD9-220ENST00000569794 KPNA4O00629 521 aaPredicted RBP3.22□□□□□ -1.89
CHD9-220ENST00000569794 ZNF207O43670 478 aaKnown RBP3.22□□□□□ -1.89
CHD9-220ENST00000569794 NDUFC2O95298 119 aa3.22□□□□□ -1.89
CHD9-220ENST00000569794 IGHMP01871 453 aa3.22□□□□□ -1.89
CHD9-220ENST00000569794 MAS1P04201 325 aa3.22□□□□□ -1.89
CHD9-220ENST00000569794 ZNF688P0C7X2 276 aa3.22□□□□□ -1.89
CHD9-220ENST00000569794 CPMP14384 443 aa3.22□□□□□ -1.89
CHD9-220ENST00000569794 INPP1P49441 399 aa3.22□□□□□ -1.89
CHD9-220ENST00000569794 SRP9P49458 86 aaKnown RBP3.22□□□□□ -1.89
CHD9-220ENST00000569794 DEFA3P59666 94 aa3.22□□□□□ -1.89
CHD9-220ENST00000569794 RPS20P60866 119 aaKnown RBP3.22□□□□□ -1.89
CHD9-220ENST00000569794 DEFA6Q01524 100 aa3.22□□□□□ -1.89
CHD9-220ENST00000569794 ATP5G2Q06055 141 aa3.22□□□□□ -1.89
CHD9-220ENST00000569794 BTN1A1Q13410 526 aa3.22□□□□□ -1.89
CHD9-220ENST00000569794 SPCS2Q15005 226 aa3.22□□□□□ -1.89
CHD9-220ENST00000569794 MRPL2Q5T653 305 aaKnown RBP3.22□□□□□ -1.89
CHD9-220ENST00000569794 LAIR2Q6ISS4 152 aa3.22□□□□□ -1.89
CHD9-220ENST00000569794 GDPD1Q8N9F7 314 aa3.22□□□□□ -1.89
CHD9-220ENST00000569794 DCAF4L2Q8NA75 395 aa3.22□□□□□ -1.89
CHD9-220ENST00000569794 LINC01555Q8NAE3 123 aa3.22□□□□□ -1.89
CHD9-220ENST00000569794 ZNF555Q8NEP9 628 aa3.22□□□□□ -1.89
CHD9-220ENST00000569794 OR2M3Q8NG83 312 aa3.22□□□□□ -1.89
CHD9-220ENST00000569794 REEP6Q96HR9 211 aa3.22□□□□□ -1.89
CHD9-220ENST00000569794 CNBD2Q96M20 576 aa3.22□□□□□ -1.89
CHD9-220ENST00000569794 ZNF382Q96SR6 550 aa3.22□□□□□ -1.89
CHD9-220ENST00000569794 THTPAQ9BU02 230 aa3.22□□□□□ -1.89
CHD9-220ENST00000569794 COMMD5Q9GZQ3 224 aa3.22□□□□□ -1.89
CHD9-220ENST00000569794 PARVBQ9HBI1 364 aa3.22□□□□□ -1.89
CHD9-220ENST00000569794 PRTFDC1Q9NRG1 225 aa3.22□□□□□ -1.89
CHD9-220ENST00000569794 LYRM2Q9NU23 88 aaPredicted RBP3.22□□□□□ -1.89
CHD9-220ENST00000569794 LRP6O75581 1613 aa3.22□□□□□ -1.89
CHD9-220ENST00000569794 GON4LQ3T8J9 2241 aa3.21□□□□□ -1.89
CHD9-220ENST00000569794 ABCA10Q8WWZ4 1543 aa3.21□□□□□ -1.9
CHD9-220ENST00000569794 hCG_1818297A0A087WSY0 165 aa3.21□□□□□ -1.9
CHD9-220ENST00000569794 IGHV5-51A0A0C4DH38 117 aa3.21□□□□□ -1.9
CHD9-220ENST00000569794 KLF18A0A0U1RQI7 1052 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms