RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, human

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHDC4-223	ENST00000568499	IGKV1D-33	P01593	117 aa		11.97	□□□□□ -0.49
KLHDC4-223	ENST00000568499	IGKV1-33	P01594	117 aa		11.97	□□□□□ -0.49
KLHDC4-223	ENST00000568499	RNASE1	P07998	156 aa	Known RBP	11.97	□□□□□ -0.49
KLHDC4-223	ENST00000568499	TMEM11	P17152	192 aa		11.97	□□□□□ -0.49
KLHDC4-223	ENST00000568499	RPL15	P61313	204 aa	Known RBP	11.97	□□□□□ -0.49
KLHDC4-223	ENST00000568499	UBA52	P62987	128 aa	Known RBP	11.97	□□□□□ -0.49
KLHDC4-223	ENST00000568499	FAAP20	Q6NZ36	180 aa		11.97	□□□□□ -0.49
KLHDC4-223	ENST00000568499	IDO2	Q6ZQW0	420 aa		11.97	□□□□□ -0.49
KLHDC4-223	ENST00000568499	ZDHHC22	Q8N966	263 aa		11.97	□□□□□ -0.49
KLHDC4-223	ENST00000568499	POC5	Q8NA72	575 aa		11.97	□□□□□ -0.49
KLHDC4-223	ENST00000568499	DRAXIN	Q8NBI3	349 aa	Predicted RBP	11.97	□□□□□ -0.49
KLHDC4-223	ENST00000568499	BVES	Q8NE79	360 aa		11.97	□□□□□ -0.49
KLHDC4-223	ENST00000568499	OR5AN1	Q8NGI8	311 aa		11.97	□□□□□ -0.49
KLHDC4-223	ENST00000568499	OR51S1	Q8NGJ8	323 aa		11.97	□□□□□ -0.49
KLHDC4-223	ENST00000568499	ZFAND2B	Q8WV99	257 aa		11.97	□□□□□ -0.49
KLHDC4-223	ENST00000568499	ZNF486	Q96H40	463 aa	Predicted RBP	11.97	□□□□□ -0.49
KLHDC4-223	ENST00000568499	DUX5	Q96PT3	197 aa		11.97	□□□□□ -0.49
KLHDC4-223	ENST00000568499	SDHC	Q99643	169 aa	Predicted RBP	11.97	□□□□□ -0.49
KLHDC4-223	ENST00000568499	CHIA	Q9BZP6	476 aa		11.97	□□□□□ -0.49
KLHDC4-223	ENST00000568499	SLC2A8	Q9NY64	477 aa		11.97	□□□□□ -0.49
KLHDC4-223	ENST00000568499	C1RL	Q9NZP8	487 aa		11.97	□□□□□ -0.49
KLHDC4-223	ENST00000568499	NIPBL	Q6KC79	2804 aa	eCLIP	11.96	□□□□□ -0.49
KLHDC4-223	ENST00000568499		A6NDX4	124 aa		11.96	□□□□□ -0.49
KLHDC4-223	ENST00000568499		M0QZK8	103 aa		11.96	□□□□□ -0.49
KLHDC4-223	ENST00000568499	ZNF735	P0CB33	412 aa		11.96	□□□□□ -0.49
KLHDC4-223	ENST00000568499	CD24	P25063	80 aa		11.96	□□□□□ -0.49
KLHDC4-223	ENST00000568499	GNRHR	P30968	328 aa		11.96	□□□□□ -0.49
KLHDC4-223	ENST00000568499	DUT	P33316	252 aa	Known RBP	11.96	□□□□□ -0.49
KLHDC4-223	ENST00000568499	KIR2DS2	P43631	304 aa		11.96	□□□□□ -0.49
KLHDC4-223	ENST00000568499	SURF2	Q15527	256 aa	Predicted RBP	11.96	□□□□□ -0.49
KLHDC4-223	ENST00000568499	AADACL3	Q5VUY0	350 aa		11.96	□□□□□ -0.49
KLHDC4-223	ENST00000568499	ZNF818P	Q6ZRF7	136 aa		11.96	□□□□□ -0.49
KLHDC4-223	ENST00000568499	KCTD9	Q7L273	389 aa		11.96	□□□□□ -0.49
KLHDC4-223	ENST00000568499	LHFPL1	Q86WI0	220 aa		11.96	□□□□□ -0.49
KLHDC4-223	ENST00000568499	PDPN	Q86YL7	162 aa		11.96	□□□□□ -0.49
KLHDC4-223	ENST00000568499	OR8H1	Q8NGG4	311 aa		11.96	□□□□□ -0.49
KLHDC4-223	ENST00000568499	PIFO	Q8TCI5	191 aa		11.96	□□□□□ -0.49
KLHDC4-223	ENST00000568499	TCTEX1D2	Q8WW35	142 aa		11.96	□□□□□ -0.49
KLHDC4-223	ENST00000568499	RSRP1	Q9BUV0	290 aa		11.96	□□□□□ -0.49
KLHDC4-223	ENST00000568499	FXYD6	Q9H0Q3	95 aa		11.96	□□□□□ -0.49
KLHDC4-223	ENST00000568499	ESM1	Q9NQ30	184 aa		11.96	□□□□□ -0.49
KLHDC4-223	ENST00000568499	SLC35D1	Q9NTN3	355 aa		11.96	□□□□□ -0.49
KLHDC4-223	ENST00000568499	C14orf166	Q9Y224	244 aa	Known RBP	11.96	□□□□□ -0.49
KLHDC4-223	ENST00000568499	LINC00854	A0A1B0GVQ3	168 aa		11.95	□□□□□ -0.5
KLHDC4-223	ENST00000568499		H0YJW9	148 aa		11.95	□□□□□ -0.5
KLHDC4-223	ENST00000568499	GPR137B	O60478	399 aa		11.95	□□□□□ -0.5
KLHDC4-223	ENST00000568499	PROP1	O75360	226 aa		11.95	□□□□□ -0.5
KLHDC4-223	ENST00000568499	OR2F2	O95006	317 aa		11.95	□□□□□ -0.5
KLHDC4-223	ENST00000568499	RIPPLY3	P57055	190 aa		11.95	□□□□□ -0.5
KLHDC4-223	ENST00000568499	EBI3	Q14213	229 aa		11.95	□□□□□ -0.5
KLHDC4-223	ENST00000568499	HNF4G	Q14541	408 aa		11.95	□□□□□ -0.5
KLHDC4-223	ENST00000568499	DHRS7B	Q6IAN0	325 aa	Predicted RBP	11.95	□□□□□ -0.5
KLHDC4-223	ENST00000568499	GLDN	Q6ZMI3	551 aa	Predicted RBP	11.95	□□□□□ -0.5
KLHDC4-223	ENST00000568499	CCDC71L	Q8N9Z2	235 aa		11.95	□□□□□ -0.5
KLHDC4-223	ENST00000568499	ZNF383	Q8NA42	475 aa		11.95	□□□□□ -0.5
KLHDC4-223	ENST00000568499	CD300LF	Q8TDQ1	290 aa		11.95	□□□□□ -0.5
KLHDC4-223	ENST00000568499	FLYWCH2	Q96CP2	140 aa	Known RBP	11.95	□□□□□ -0.5
KLHDC4-223	ENST00000568499	EAF1	Q96JC9	268 aa	Predicted RBP	11.95	□□□□□ -0.5
KLHDC4-223	ENST00000568499	RBM14	Q96PK6	669 aa	Known RBP	11.95	□□□□□ -0.5
KLHDC4-223	ENST00000568499	TSC22D3	Q99576	134 aa		11.95	□□□□□ -0.5
KLHDC4-223	ENST00000568499	RNF5	Q99942	180 aa		11.95	□□□□□ -0.5
KLHDC4-223	ENST00000568499	NCBP2L	A6PVI3	153 aa	Known RBP	11.94	□□□□□ -0.5
KLHDC4-223	ENST00000568499	TNFSF12	O43508	249 aa		11.94	□□□□□ -0.5
KLHDC4-223	ENST00000568499	UPK1B	O75841	260 aa		11.94	□□□□□ -0.5
KLHDC4-223	ENST00000568499	IGLV2-14	P01704	120 aa		11.94	□□□□□ -0.5
KLHDC4-223	ENST00000568499	PHLDA2	Q53GA4	152 aa		11.94	□□□□□ -0.5
KLHDC4-223	ENST00000568499	MZT2B	Q6NZ67	158 aa		11.94	□□□□□ -0.5
KLHDC4-223	ENST00000568499	C11orf88	Q6PI97	169 aa		11.94	□□□□□ -0.5
KLHDC4-223	ENST00000568499	TMEM219	Q86XT9	240 aa		11.94	□□□□□ -0.5
KLHDC4-223	ENST00000568499	OR4C13	Q8NGP0	309 aa		11.94	□□□□□ -0.5
KLHDC4-223	ENST00000568499	TSNAX	Q99598	290 aa	Known RBP	11.94	□□□□□ -0.5
KLHDC4-223	ENST00000568499	SLC25A21	Q9BQT8	299 aa	Predicted RBP	11.94	□□□□□ -0.5
KLHDC4-223	ENST00000568499	AIFM2	Q9BRQ8	373 aa		11.94	□□□□□ -0.5
KLHDC4-223	ENST00000568499	SLC25A33	Q9BSK2	321 aa		11.94	□□□□□ -0.5
KLHDC4-223	ENST00000568499	NPFFR1	Q9GZQ6	430 aa		11.94	□□□□□ -0.5
KLHDC4-223	ENST00000568499	KIAA1456	Q9P272	454 aa		11.94	□□□□□ -0.5
KLHDC4-223	ENST00000568499	COPZ2	Q9P299	210 aa		11.94	□□□□□ -0.5
KLHDC4-223	ENST00000568499	MOB4	Q9Y3A3	225 aa		11.94	□□□□□ -0.5
KLHDC4-223	ENST00000568499	FCGR3B	O75015	233 aa		11.93	□□□□□ -0.5
KLHDC4-223	ENST00000568499	PGLYRP1	O75594	196 aa	Predicted RBP	11.93	□□□□□ -0.5
KLHDC4-223	ENST00000568499	CTSD	P07339	412 aa	Predicted RBP	11.93	□□□□□ -0.5
KLHDC4-223	ENST00000568499	RPS16	P62249	146 aa	Known RBP	11.93	□□□□□ -0.5
KLHDC4-223	ENST00000568499	TCTEX1D1	Q8N7M0	179 aa		11.93	□□□□□ -0.5
KLHDC4-223	ENST00000568499	OR13C8	Q8NGS7	320 aa		11.93	□□□□□ -0.5
KLHDC4-223	ENST00000568499	OR4S2	Q8NH73	311 aa		11.93	□□□□□ -0.5
KLHDC4-223	ENST00000568499	MARCH1	Q8TCQ1	289 aa		11.93	□□□□□ -0.5
KLHDC4-223	ENST00000568499	C5orf30	Q96GV9	206 aa		11.93	□□□□□ -0.5
KLHDC4-223	ENST00000568499	LIN7C	Q9NUP9	197 aa	Known RBP	11.93	□□□□□ -0.5
KLHDC4-223	ENST00000568499	SETD2	Q9BYW2	2564 aa	Predicted RBP	11.92	□□□□□ -0.5
KLHDC4-223	ENST00000568499	FAM181B	A6NEQ2	426 aa		11.92	□□□□□ -0.5
KLHDC4-223	ENST00000568499	LINC00473	A8K010	186 aa		11.92	□□□□□ -0.5
KLHDC4-223	ENST00000568499	SHOX	O15266	292 aa		11.92	□□□□□ -0.5
KLHDC4-223	ENST00000568499	FGF16	O43320	207 aa		11.92	□□□□□ -0.5
KLHDC4-223	ENST00000568499	RLN1	P04808	185 aa		11.92	□□□□□ -0.5
KLHDC4-223	ENST00000568499	LGALS7	P47929	136 aa		11.92	□□□□□ -0.5
KLHDC4-223	ENST00000568499	PIGP	P57054	158 aa		11.92	□□□□□ -0.5
KLHDC4-223	ENST00000568499	DEFA1	P59665	94 aa		11.92	□□□□□ -0.5
KLHDC4-223	ENST00000568499	DEFA3	P59666	94 aa		11.92	□□□□□ -0.5
KLHDC4-223	ENST00000568499	RND3	P61587	244 aa		11.92	□□□□□ -0.5
KLHDC4-223	ENST00000568499	RBMS2	Q15434	407 aa	Known RBP	11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms