RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	NCS1	P62166	190 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	LSM3	P62310	102 aa	Known RBP	5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	PLA2G7	Q13093	441 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	KIR2DS1	Q14954	304 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	C22orf42	Q6IC83	251 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	TMEM65	Q6PI78	240 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	FAM131A	Q6UXB0	335 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	ETV3L	Q6ZN32	361 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	SLC51B	Q86UW2	128 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	TPRA1	Q86W33	373 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	RNF152	Q8N8N0	203 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	OR5AN1	Q8NGI8	311 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	OR4A4P	Q8NGN8	299 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	OR10R2	Q8NGX6	335 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	MRAP	Q8TCY5	172 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	S100Z	Q8WXG8	99 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	RAX2	Q96IS3	184 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	KCTD7	Q96MP8	289 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	P2RX4	Q99571	388 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	RNF5	Q99942	180 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	AIFM2	Q9BRQ8	373 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	DCUN1D5	Q9BTE7	237 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	MCRIP2	Q9BUT9	160 aa	Known RBP	5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	GPR61	Q9BZJ8	451 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	ATG5	Q9H1Y0	275 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	OR51J1	Q9H342	316 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	ZNF221	Q9UK13	617 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	ZNF580	Q9UK33	172 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	STUB1	Q9UNE7	303 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	SSR3	Q9UNL2	185 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	KCNK7	Q9Y2U2	307 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	WASHC3	Q9Y3C0	194 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635	WSB1	Q9Y6I7	421 aa		5.42	□□□□□ -1.54
SF3B3-209	ENST00000567635		A0A075B6Q4	140 aa		5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	IGHV7-81	A0A0B4J1V7	117 aa		5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635		A0A0B4J203	849 aa		5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	TRAV41	A0A0B4J266	112 aa		5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	IGKV1-6	A0A0C4DH72	117 aa		5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635		G3V318	75 aa		5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635		H0YJW9	148 aa		5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635		H7C2Y5	167 aa		5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	RAB27B	O00194	218 aa		5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	LCE2B	O14633	110 aa		5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	RRH	O14718	337 aa		5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	PROP1	O75360	226 aa		5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	NDUFA3	O95167	84 aa		5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	HLA-DRB1	P01911	266 aa		5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	FCGR3A	P08637	254 aa		5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	GNB3	P16520	340 aa		5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	PSMB8	P28062	276 aa		5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	PPIF	P30405	207 aa	Known RBP	5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	TALDO1	P37837	337 aa		5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	SERPINB10	P48595	397 aa		5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	KRTAP10-11	P60412	298 aa		5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	CFHR3	Q02985	330 aa		5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	PLGLA	Q15195	96 aa		5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	MOGAT2	Q3SYC2	334 aa		5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	ZNF660	Q6AZW8	331 aa	Predicted RBP	5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	GLDN	Q6ZMI3	551 aa	Predicted RBP	5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	LCNL1	Q6ZST4	164 aa		5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	AKAP14	Q86UN6	197 aa		5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	NR2C2AP	Q86WQ0	139 aa		5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	OR8U1	Q8NH10	309 aa		5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	OR10J5	Q8NHC4	309 aa		5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	GRPEL2	Q8TAA5	225 aa		5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	DYNC2LI1	Q8TCX1	351 aa		5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	DPF1	Q92782	380 aa		5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	ZNF486	Q96H40	463 aa	Predicted RBP	5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	DUX3	Q96PT4	197 aa		5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	CENPO	Q9BU64	300 aa		5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	TOLLIP	Q9H0E2	274 aa		5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	DCSTAMP	Q9H295	470 aa		5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	TXNL4B	Q9NX01	149 aa	Known RBP	5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	RDH8	Q9NYR8	311 aa		5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	A3GALT2	U3KPV4	340 aa		5.41	□□□□□ -1.54
SF3B3-209	ENST00000567635	TRBV6-7	A0A0A0MS04	114 aa		5.4	□□□□□ -1.54
SF3B3-209	ENST00000567635	LOC100506127	A0A0U1RQW1	187 aa		5.4	□□□□□ -1.54
SF3B3-209	ENST00000567635	MFNG	O00587	321 aa		5.4	□□□□□ -1.54
SF3B3-209	ENST00000567635	FCN1	O00602	326 aa		5.4	□□□□□ -1.54
SF3B3-209	ENST00000567635	BET1	O15155	118 aa		5.4	□□□□□ -1.54
SF3B3-209	ENST00000567635	ATP6V0E1	O15342	81 aa		5.4	□□□□□ -1.54
SF3B3-209	ENST00000567635	FABP7	O15540	132 aa		5.4	□□□□□ -1.54
SF3B3-209	ENST00000567635	DIRAS3	O95661	229 aa		5.4	□□□□□ -1.54
SF3B3-209	ENST00000567635	IGLV1-40	P01703	118 aa		5.4	□□□□□ -1.54
SF3B3-209	ENST00000567635	OR8U9	P0C7N5	309 aa		5.4	□□□□□ -1.54
SF3B3-209	ENST00000567635	HIST1H1D	P16402	221 aa	Known RBP	5.4	□□□□□ -1.54
SF3B3-209	ENST00000567635	HOXD3	P31249	432 aa	Predicted RBP	5.4	□□□□□ -1.54
SF3B3-209	ENST00000567635	RAB9A	P51151	201 aa		5.4	□□□□□ -1.54
SF3B3-209	ENST00000567635	RAB25	P57735	213 aa		5.4	□□□□□ -1.54
SF3B3-209	ENST00000567635	RPS16	P62249	146 aa	Known RBP	5.4	□□□□□ -1.54
SF3B3-209	ENST00000567635	CX3CL1	P78423	397 aa		5.4	□□□□□ -1.54
SF3B3-209	ENST00000567635	EGFEM1P	Q0D2K5	195 aa		5.4	□□□□□ -1.54
SF3B3-209	ENST00000567635	TMEM267	Q0VDI3	215 aa	Predicted RBP	5.4	□□□□□ -1.54
SF3B3-209	ENST00000567635	ARFRP1	Q13795	201 aa		5.4	□□□□□ -1.54
SF3B3-209	ENST00000567635	ARL6IP1	Q15041	203 aa		5.4	□□□□□ -1.54
SF3B3-209	ENST00000567635	PSG5	Q15238	335 aa		5.4	□□□□□ -1.54
SF3B3-209	ENST00000567635	SRSF7	Q16629	238 aa	Known RBP eCLIP	5.4	□□□□□ -1.54
SF3B3-209	ENST00000567635	CDNF	Q49AH0	187 aa		5.4	□□□□□ -1.54
SF3B3-209	ENST00000567635	IGSF11	Q5DX21	431 aa		5.4	□□□□□ -1.54

Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms