RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 LCE3AQ5TA76 89 aa2.77□□□□□ -1.97
CNOT1-209ENST00000566240 C8orf74Q6P047 294 aa2.77□□□□□ -1.97
CNOT1-209ENST00000566240 SPNS3Q6ZMD2 512 aa2.77□□□□□ -1.97
CNOT1-209ENST00000566240 VN1R4Q7Z5H5 301 aa2.77□□□□□ -1.97
CNOT1-209ENST00000566240 KRT222Q8N1A0 295 aa2.77□□□□□ -1.97
CNOT1-209ENST00000566240 UBL4BQ8N7F7 174 aa2.77□□□□□ -1.97
CNOT1-209ENST00000566240 OR1P1Q8NH06 330 aa2.77□□□□□ -1.97
CNOT1-209ENST00000566240 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.77□□□□□ -1.97
CNOT1-209ENST00000566240 TAMM41Q96BW9 452 aa2.77□□□□□ -1.97
CNOT1-209ENST00000566240 PYURFQ96I23 114 aa2.77□□□□□ -1.97
CNOT1-209ENST00000566240 GABARAPL1Q9H0R8 117 aa2.77□□□□□ -1.97
CNOT1-209ENST00000566240 TRIM45Q9H8W5 580 aaPredicted RBP2.77□□□□□ -1.97
CNOT1-209ENST00000566240 PLEKHJ1Q9NW61 149 aa2.77□□□□□ -1.97
CNOT1-209ENST00000566240 THADAQ6YHU6 1953 aa2.77□□□□□ -1.97
CNOT1-209ENST00000566240 CLUHO75153 1309 aa2.76□□□□□ -1.97
CNOT1-209ENST00000566240 OR5H14A6NHG9 310 aa2.76□□□□□ -1.97
CNOT1-209ENST00000566240 ZNF729A6NN14 1252 aaPredicted RBP2.76□□□□□ -1.97
CNOT1-209ENST00000566240 H3BQ85 93 aa2.76□□□□□ -1.97
CNOT1-209ENST00000566240 M0QZ92 97 aa2.76□□□□□ -1.97
CNOT1-209ENST00000566240 SLC16A4O15374 487 aa2.76□□□□□ -1.97
CNOT1-209ENST00000566240 PDYNP01213 254 aa2.76□□□□□ -1.97
CNOT1-209ENST00000566240 TNNC2P02585 160 aa2.76□□□□□ -1.97
CNOT1-209ENST00000566240 UCHL3P15374 230 aa2.76□□□□□ -1.97
CNOT1-209ENST00000566240 COILP38432 576 aaPredicted RBP2.76□□□□□ -1.97
CNOT1-209ENST00000566240 RPS11P62280 158 aaKnown RBP eCLIP2.76□□□□□ -1.97
CNOT1-209ENST00000566240 HLA-DRB5Q30154 266 aa2.76□□□□□ -1.97
CNOT1-209ENST00000566240 ZCWPW2Q504Y3 356 aa2.76□□□□□ -1.97
CNOT1-209ENST00000566240 CENPWQ5EE01 88 aa2.76□□□□□ -1.97
CNOT1-209ENST00000566240 TCF23Q7RTU1 214 aa2.76□□□□□ -1.97
CNOT1-209ENST00000566240 SLC35F6Q8N357 371 aa2.76□□□□□ -1.97
CNOT1-209ENST00000566240 OPTNQ96CV9 577 aa2.76□□□□□ -1.97
CNOT1-209ENST00000566240 OR2V2Q96R30 315 aa2.76□□□□□ -1.97
CNOT1-209ENST00000566240 TMEM208Q9BTX3 173 aa2.76□□□□□ -1.97
CNOT1-209ENST00000566240 CCDC94Q9BW85 323 aaPredicted RBP2.76□□□□□ -1.97
CNOT1-209ENST00000566240 TSSK6Q9BXA6 273 aa2.76□□□□□ -1.97
CNOT1-209ENST00000566240 ZNF492Q9P255 531 aa2.76□□□□□ -1.97
CNOT1-209ENST00000566240 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.76□□□□□ -1.97
CNOT1-209ENST00000566240 COL1A2P08123 1366 aa2.75□□□□□ -1.97
CNOT1-209ENST00000566240 CITO14578 2027 aa2.75□□□□□ -1.97
CNOT1-209ENST00000566240 MCM3APO60318 1980 aa2.75□□□□□ -1.97
CNOT1-209ENST00000566240 CASP8AP2Q9UKL3 1982 aa2.75□□□□□ -1.97
CNOT1-209ENST00000566240 SPRR5A0A1B0GTR4 108 aa2.75□□□□□ -1.97
CNOT1-209ENST00000566240 ARGFXA6NJG6 315 aa2.75□□□□□ -1.97
CNOT1-209ENST00000566240 MIF4GDA9UHW6 222 aaKnown RBP2.75□□□□□ -1.97
CNOT1-209ENST00000566240 M0QYV0 167 aa2.75□□□□□ -1.97
CNOT1-209ENST00000566240 PGRMC1O00264 195 aaKnown RBP2.75□□□□□ -1.97
CNOT1-209ENST00000566240 ZW10O43264 779 aa2.75□□□□□ -1.97
CNOT1-209ENST00000566240 NIPSNAP2O75323 286 aa2.75□□□□□ -1.97
CNOT1-209ENST00000566240 GPR75O95800 540 aa2.75□□□□□ -1.97
CNOT1-209ENST00000566240 GADD45AP24522 165 aa2.75□□□□□ -1.97
CNOT1-209ENST00000566240 EVI2BP34910 448 aa2.75□□□□□ -1.97
CNOT1-209ENST00000566240 ITGB3BPQ13352 177 aaPredicted RBP2.75□□□□□ -1.97
CNOT1-209ENST00000566240 LRRC26Q2I0M4 334 aa2.75□□□□□ -1.97
CNOT1-209ENST00000566240 HENMT1Q5T8I9 393 aaKnown RBP2.75□□□□□ -1.97
CNOT1-209ENST00000566240 DNM1P34Q6PK57 102 aa2.75□□□□□ -1.97
CNOT1-209ENST00000566240 ZNF720Q7Z2F6 126 aa2.75□□□□□ -1.97
CNOT1-209ENST00000566240 RIBC1Q8N443 379 aaPredicted RBP2.75□□□□□ -1.97
CNOT1-209ENST00000566240 C3orf22Q8N5N4 141 aa2.75□□□□□ -1.97
CNOT1-209ENST00000566240 C2orf73Q8N5S3 287 aaPredicted RBP2.75□□□□□ -1.97
CNOT1-209ENST00000566240 TMEM251Q8N6I4 163 aa2.75□□□□□ -1.97
CNOT1-209ENST00000566240 FER1L6-AS1Q8NA97 138 aa2.75□□□□□ -1.97
CNOT1-209ENST00000566240 C1orf64Q8NEQ6 169 aa2.75□□□□□ -1.97
CNOT1-209ENST00000566240 OR9I1Q8NGQ6 314 aa2.75□□□□□ -1.97
CNOT1-209ENST00000566240 OR4A5Q8NH83 315 aa2.75□□□□□ -1.97
CNOT1-209ENST00000566240 ZNRF2Q8NHG8 242 aa2.75□□□□□ -1.97
CNOT1-209ENST00000566240 SPPL2BQ8TCT7 592 aa2.75□□□□□ -1.97
CNOT1-209ENST00000566240 KCTD4Q8WVF5 259 aa2.75□□□□□ -1.97
CNOT1-209ENST00000566240 ANKRD7Q92527 254 aa2.75□□□□□ -1.97
CNOT1-209ENST00000566240 CMBLQ96DG6 245 aa2.75□□□□□ -1.97
CNOT1-209ENST00000566240 ANKRD36BP1Q96IX9 119 aa2.75□□□□□ -1.97
CNOT1-209ENST00000566240 CAPZA3Q96KX2 299 aa2.75□□□□□ -1.97
CNOT1-209ENST00000566240 SPANXB1Q9NS25 103 aaPredicted RBP2.75□□□□□ -1.97
CNOT1-209ENST00000566240 DNAJC12Q9UKB3 198 aa2.75□□□□□ -1.97
CNOT1-209ENST00000566240 TP53TG1Q9Y2A0 90 aa2.75□□□□□ -1.97
CNOT1-209ENST00000566240 V9GYY5 206 aaPredicted RBP2.75□□□□□ -1.97
CNOT1-209ENST00000566240 MGAMO43451 1857 aa2.75□□□□□ -1.97
CNOT1-209ENST00000566240 NOTCH2Q04721 2471 aa2.74□□□□□ -1.97
CNOT1-209ENST00000566240 METTL15A6NJ78 407 aa2.74□□□□□ -1.97
CNOT1-209ENST00000566240 PSMG1O95456 288 aa2.74□□□□□ -1.97
CNOT1-209ENST00000566240 CTSEP14091 401 aa2.74□□□□□ -1.97
CNOT1-209ENST00000566240 AGTR1P30556 359 aa2.74□□□□□ -1.97
CNOT1-209ENST00000566240 SULT1A2P50226 295 aa2.74□□□□□ -1.97
CNOT1-209ENST00000566240 KLF3P57682 345 aaPredicted RBP2.74□□□□□ -1.97
CNOT1-209ENST00000566240 FLI1Q01543 452 aaPredicted RBP2.74□□□□□ -1.97
CNOT1-209ENST00000566240 SMAGPQ0VAQ4 97 aa2.74□□□□□ -1.97
CNOT1-209ENST00000566240 IL15RAQ13261 267 aa2.74□□□□□ -1.97
CNOT1-209ENST00000566240 C1DQ13901 141 aaKnown RBP2.74□□□□□ -1.97
CNOT1-209ENST00000566240 CDKL4Q5MAI5 379 aa2.74□□□□□ -1.97
CNOT1-209ENST00000566240 PAGE2Q7Z2X7 111 aa2.74□□□□□ -1.97
CNOT1-209ENST00000566240 ADM2Q7Z4H4 148 aa2.74□□□□□ -1.97
CNOT1-209ENST00000566240 CROCCP2Q86T23 111 aa2.74□□□□□ -1.97
CNOT1-209ENST00000566240 IFT20Q8IY31 132 aa2.74□□□□□ -1.97
CNOT1-209ENST00000566240 RPRMLQ8N4K4 120 aa2.74□□□□□ -1.97
CNOT1-209ENST00000566240 KRTCAP2Q8N6L1 136 aa2.74□□□□□ -1.97
CNOT1-209ENST00000566240 TMEM161BQ8NDZ6 487 aa2.74□□□□□ -1.97
CNOT1-209ENST00000566240 OR5K1Q8NHB7 308 aa2.74□□□□□ -1.97
CNOT1-209ENST00000566240 GALMQ96C23 342 aa2.74□□□□□ -1.97
CNOT1-209ENST00000566240 CMTM5Q96DZ9 223 aa2.74□□□□□ -1.97
CNOT1-209ENST00000566240 SMIM19Q96E16 107 aa2.74□□□□□ -1.97
CNOT1-209ENST00000566240 B9D2Q9BPU9 175 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms