RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 CBX5P45973 191 aa15.58■□□□□ 0.08
CMTM3-211ENST00000565922 LUMP51884 338 aaPredicted RBP15.58■□□□□ 0.08
CMTM3-211ENST00000565922 BEAN1Q3B7T3 259 aa15.58■□□□□ 0.08
CMTM3-211ENST00000565922 PDLIM3Q53GG5 364 aaPredicted RBP15.58■□□□□ 0.08
CMTM3-211ENST00000565922 TCTEX1D1Q8N7M0 179 aa15.58■□□□□ 0.08
CMTM3-211ENST00000565922 OR13F1Q8NGS4 319 aa15.58■□□□□ 0.08
CMTM3-211ENST00000565922 SLC25A46Q96AG3 418 aa15.58■□□□□ 0.08
CMTM3-211ENST00000565922 METTL1Q9UBP6 276 aaKnown RBP15.58■□□□□ 0.08
CMTM3-211ENST00000565922 OR2W1Q9Y3N9 320 aa15.58■□□□□ 0.08
CMTM3-211ENST00000565922 NOTCH1P46531 2555 aa15.58■□□□□ 0.08
CMTM3-211ENST00000565922 TRAV41A0A0B4J266 112 aa15.57■□□□□ 0.08
CMTM3-211ENST00000565922 SSX5O60225 188 aa15.57■□□□□ 0.08
CMTM3-211ENST00000565922 IGKV1-16P04430 117 aa15.57■□□□□ 0.08
CMTM3-211ENST00000565922 RPLP1P05386 114 aaKnown RBP15.57■□□□□ 0.08
CMTM3-211ENST00000565922 CDX1P47902 265 aaPredicted RBP15.57■□□□□ 0.08
CMTM3-211ENST00000565922 LGALS7P47929 136 aa15.57■□□□□ 0.08
CMTM3-211ENST00000565922 ARPC4P59998 168 aa15.57■□□□□ 0.08
CMTM3-211ENST00000565922 TMEM267Q0VDI3 215 aaPredicted RBP15.57■□□□□ 0.08
CMTM3-211ENST00000565922 PSG5Q15238 335 aa15.57■□□□□ 0.08
CMTM3-211ENST00000565922 KPRPQ5T749 579 aaPredicted RBP15.57■□□□□ 0.08
CMTM3-211ENST00000565922 TMEM65Q6PI78 240 aa15.57■□□□□ 0.08
CMTM3-211ENST00000565922 C8orf86Q6ZUL3 223 aa15.57■□□□□ 0.08
CMTM3-211ENST00000565922 ZNF645Q8N7E2 425 aa15.57■□□□□ 0.08
CMTM3-211ENST00000565922 BEST4Q8NFU0 473 aa15.57■□□□□ 0.08
CMTM3-211ENST00000565922 RCC1LQ96I51 464 aaKnown RBP15.57■□□□□ 0.08
CMTM3-211ENST00000565922 GPR61Q9BZJ8 451 aa15.57■□□□□ 0.08
CMTM3-211ENST00000565922 AUNIPQ9H7T9 357 aa15.57■□□□□ 0.08
CMTM3-211ENST00000565922 XRCC3O43542 346 aa15.56■□□□□ 0.08
CMTM3-211ENST00000565922 PSMB8P28062 276 aa15.56■□□□□ 0.08
CMTM3-211ENST00000565922 MYCNOSP40205 109 aa15.56■□□□□ 0.08
CMTM3-211ENST00000565922 CRIP2P52943 208 aaPredicted RBP15.56■□□□□ 0.08
CMTM3-211ENST00000565922 SAMD12Q8N8I0 201 aa15.56■□□□□ 0.08
CMTM3-211ENST00000565922 ABHD5Q8WTS1 349 aa15.56■□□□□ 0.08
CMTM3-211ENST00000565922 HLA-DQB1P01920 261 aa15.55■□□□□ 0.08
CMTM3-211ENST00000565922 NFYAP23511 347 aaPredicted RBP15.55■□□□□ 0.08
CMTM3-211ENST00000565922 PPIFP30405 207 aaKnown RBP15.55■□□□□ 0.08
CMTM3-211ENST00000565922 DUTP33316 252 aaKnown RBP15.55■□□□□ 0.08
CMTM3-211ENST00000565922 CX3CL1P78423 397 aa15.55■□□□□ 0.08
CMTM3-211ENST00000565922 OXLD1Q5BKU9 147 aa15.55■□□□□ 0.08
CMTM3-211ENST00000565922 ZNF562Q6V9R5 426 aa15.55■□□□□ 0.08
CMTM3-211ENST00000565922 REC114Q7Z4M0 266 aa15.55■□□□□ 0.08
CMTM3-211ENST00000565922 HOGA1Q86XE5 327 aa15.55■□□□□ 0.08
CMTM3-211ENST00000565922 LINC00482Q8N8I6 264 aa15.55■□□□□ 0.08
CMTM3-211ENST00000565922 HARBI1Q96MB7 349 aa15.55■□□□□ 0.08
CMTM3-211ENST00000565922 WSB1Q9Y6I7 421 aa15.55■□□□□ 0.08
CMTM3-211ENST00000565922 NOTCH3Q9UM47 2321 aa15.55■□□□□ 0.08
CMTM3-211ENST00000565922 G3V318 75 aa15.54■□□□□ 0.08
CMTM3-211ENST00000565922 SHOXO15266 292 aa15.54■□□□□ 0.08
CMTM3-211ENST00000565922 SLC25A17O43808 307 aa15.54■□□□□ 0.08
CMTM3-211ENST00000565922 LINC00205P59089 165 aa15.54■□□□□ 0.08
CMTM3-211ENST00000565922 NCS1P62166 190 aa15.54■□□□□ 0.08
CMTM3-211ENST00000565922 ECSCRQ19T08 205 aa15.54■□□□□ 0.08
CMTM3-211ENST00000565922 TMEM177Q53S58 311 aa15.54■□□□□ 0.08
CMTM3-211ENST00000565922 TMEM69Q5SWH9 247 aa15.54■□□□□ 0.08
CMTM3-211ENST00000565922 ETV3LQ6ZN32 361 aa15.54■□□□□ 0.08
CMTM3-211ENST00000565922 ACOT12Q8WYK0 555 aa15.54■□□□□ 0.08
CMTM3-211ENST00000565922 CMTM3Q96MX0 182 aa15.54■□□□□ 0.08
CMTM3-211ENST00000565922 MCRIP2Q9BUT9 160 aaKnown RBP15.54■□□□□ 0.08
CMTM3-211ENST00000565922 MRPS26Q9BYN8 205 aaKnown RBP15.54■□□□□ 0.08
CMTM3-211ENST00000565922 NECAP2Q9NVZ3 263 aa15.54■□□□□ 0.08
CMTM3-211ENST00000565922 MRPS7Q9Y2R9 242 aaKnown RBP15.54■□□□□ 0.08
CMTM3-211ENST00000565922 CA2P00918 260 aa15.53■□□□□ 0.08
CMTM3-211ENST00000565922 IGLV1-40P01703 118 aa15.53■□□□□ 0.08
CMTM3-211ENST00000565922 SMIM18P0DKX4 95 aa15.53■□□□□ 0.08
CMTM3-211ENST00000565922 CD40LGP29965 261 aa15.53■□□□□ 0.08
CMTM3-211ENST00000565922 VBP1P61758 197 aa15.53■□□□□ 0.08
CMTM3-211ENST00000565922 NDPQ00604 133 aa15.53■□□□□ 0.08
CMTM3-211ENST00000565922 PYHIN1Q6K0P9 492 aa15.53■□□□□ 0.08
CMTM3-211ENST00000565922 PPP1R27Q86WC6 154 aa15.53■□□□□ 0.08
CMTM3-211ENST00000565922 MRPL41Q8IXM3 137 aaKnown RBP15.53■□□□□ 0.08
CMTM3-211ENST00000565922 MINDY2Q8NBR6 621 aa15.53■□□□□ 0.08
CMTM3-211ENST00000565922 BVESQ8NE79 360 aa15.53■□□□□ 0.08
CMTM3-211ENST00000565922 C4orf3Q8WVX3 66 aa15.53■□□□□ 0.08
CMTM3-211ENST00000565922 C5orf30Q96GV9 206 aa15.53■□□□□ 0.08
CMTM3-211ENST00000565922 IFT46Q9NQC8 304 aa15.53■□□□□ 0.08
CMTM3-211ENST00000565922 FOXA2Q9Y261 457 aaPredicted RBP15.53■□□□□ 0.08
CMTM3-211ENST00000565922 PRELID3BQ9Y3B1 194 aa15.53■□□□□ 0.08
CMTM3-211ENST00000565922 A0A1W2PN81 502 aa15.52■□□□□ 0.08
CMTM3-211ENST00000565922 J3QRK9 145 aa15.52■□□□□ 0.08
CMTM3-211ENST00000565922 CCL24O00175 119 aa15.52■□□□□ 0.08
CMTM3-211ENST00000565922 TUSC2O75896 110 aa15.52■□□□□ 0.08
CMTM3-211ENST00000565922 IGLL1P15814 213 aa15.52■□□□□ 0.08
CMTM3-211ENST00000565922 CHRNA7P36544 502 aa15.52■□□□□ 0.08
CMTM3-211ENST00000565922 VMA21Q3ZAQ7 101 aa15.52■□□□□ 0.08
CMTM3-211ENST00000565922 AKIRIN2Q53H80 203 aa15.52■□□□□ 0.08
CMTM3-211ENST00000565922 LCNL1Q6ZST4 164 aa15.52■□□□□ 0.08
CMTM3-211ENST00000565922 C18orf65Q6ZTR6 163 aa15.52■□□□□ 0.08
CMTM3-211ENST00000565922 KCTD9Q7L273 389 aa15.52■□□□□ 0.08
CMTM3-211ENST00000565922 ANKRD13BQ86YJ7 626 aa15.52■□□□□ 0.08
CMTM3-211ENST00000565922 GVQW1Q8N7I0 195 aa15.52■□□□□ 0.08
CMTM3-211ENST00000565922 OSR1Q8TAX0 266 aaPredicted RBP15.52■□□□□ 0.08
CMTM3-211ENST00000565922 MYOZ3Q8TDC0 251 aa15.52■□□□□ 0.08
CMTM3-211ENST00000565922 DDB2Q92466 427 aa15.52■□□□□ 0.08
CMTM3-211ENST00000565922 ARPC1AQ92747 370 aa15.52■□□□□ 0.08
CMTM3-211ENST00000565922 DPF1Q92782 380 aa15.52■□□□□ 0.08
CMTM3-211ENST00000565922 UBE2E2Q96LR5 201 aa15.52■□□□□ 0.08
CMTM3-211ENST00000565922 CLCC1Q96S66 551 aa15.52■□□□□ 0.08
CMTM3-211ENST00000565922 P2RX4Q99571 388 aa15.52■□□□□ 0.08
CMTM3-211ENST00000565922 RBMX2Q9Y388 322 aaKnown RBP15.52■□□□□ 0.08
CMTM3-211ENST00000565922 SMIM31A0A1B0GVY4 71 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms