RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 COTL1Q14019 142 aa11.71□□□□□ -0.53
CX3CL1-204ENST00000565912 SLC25A45Q8N413 288 aa11.71□□□□□ -0.53
CX3CL1-204ENST00000565912 A0A0B4J293 547 aa11.71□□□□□ -0.53
CX3CL1-204ENST00000565912 CDCP2Q5VXM1 449 aa11.71□□□□□ -0.53
CX3CL1-204ENST00000565912 GPR61Q9BZJ8 451 aa11.71□□□□□ -0.53
CX3CL1-204ENST00000565912 TMEM222Q9H0R3 208 aa11.71□□□□□ -0.53
CX3CL1-204ENST00000565912 FOCADQ5VW36 1801 aa11.71□□□□□ -0.54
CX3CL1-204ENST00000565912 TMEM238LA0A1B0GVL6 79 aa11.71□□□□□ -0.54
CX3CL1-204ENST00000565912 A6NJY4 79 aa11.71□□□□□ -0.54
CX3CL1-204ENST00000565912 MPDU1O75352 247 aa11.71□□□□□ -0.54
CX3CL1-204ENST00000565912 GPX1P07203 203 aa11.71□□□□□ -0.54
CX3CL1-204ENST00000565912 MIOXQ9UGB7 285 aa11.71□□□□□ -0.54
CX3CL1-204ENST00000565912 IFNL4K9M1U5 179 aa11.71□□□□□ -0.54
CX3CL1-204ENST00000565912 FAM3BP58499 235 aaPredicted RBP11.71□□□□□ -0.54
CX3CL1-204ENST00000565912 ZNF345Q14585 488 aa11.71□□□□□ -0.54
CX3CL1-204ENST00000565912 ZNF79Q15937 498 aa11.71□□□□□ -0.54
CX3CL1-204ENST00000565912 RALYQ9UKM9 306 aaKnown RBP11.71□□□□□ -0.54
CX3CL1-204ENST00000565912 ARID1AO14497 2285 aa11.7□□□□□ -0.54
CX3CL1-204ENST00000565912 H3BTX0 84 aa11.7□□□□□ -0.54
CX3CL1-204ENST00000565912 PGLYRP1O75594 196 aaPredicted RBP11.7□□□□□ -0.54
CX3CL1-204ENST00000565912 FGF5P12034 268 aa11.7□□□□□ -0.54
CX3CL1-204ENST00000565912 VAX1Q5SQQ9 334 aa11.7□□□□□ -0.54
CX3CL1-204ENST00000565912 FAM74A4Q5TZK3 123 aa11.7□□□□□ -0.54
CX3CL1-204ENST00000565912 PRR19A6NJB7 356 aa11.7□□□□□ -0.54
CX3CL1-204ENST00000565912 VSIG10L2P0DP72 767 aa11.7□□□□□ -0.54
CX3CL1-204ENST00000565912 FGFRL1Q8N441 504 aa11.7□□□□□ -0.54
CX3CL1-204ENST00000565912 IGKV1-8A0A0C4DH67 115 aa11.7□□□□□ -0.54
CX3CL1-204ENST00000565912 IGKV3-20P01619 116 aa11.7□□□□□ -0.54
CX3CL1-204ENST00000565912 C1QCP02747 245 aa11.7□□□□□ -0.54
CX3CL1-204ENST00000565912 SNAI3Q3KNW1 292 aa11.7□□□□□ -0.54
CX3CL1-204ENST00000565912 CXorf66Q5JRM2 361 aaPredicted RBP11.7□□□□□ -0.54
CX3CL1-204ENST00000565912 SLC25A47Q6Q0C1 308 aa11.7□□□□□ -0.54
CX3CL1-204ENST00000565912 PQLC2Q6ZP29 291 aa11.7□□□□□ -0.54
CX3CL1-204ENST00000565912 GPHA2Q96T91 129 aa11.7□□□□□ -0.54
CX3CL1-204ENST00000565912 AMELYQ99218 206 aa11.7□□□□□ -0.54
CX3CL1-204ENST00000565912 CCL19Q99731 98 aa11.7□□□□□ -0.54
CX3CL1-204ENST00000565912 HSPB9Q9BQS6 159 aa11.7□□□□□ -0.54
CX3CL1-204ENST00000565912 NPIPB8E9PQR5 432 aa11.7□□□□□ -0.54
CX3CL1-204ENST00000565912 LMX1BO60663 402 aa11.7□□□□□ -0.54
CX3CL1-204ENST00000565912 PSG9Q00887 426 aa11.7□□□□□ -0.54
CX3CL1-204ENST00000565912 LSM10Q969L4 123 aaKnown RBP11.7□□□□□ -0.54
CX3CL1-204ENST00000565912 DLL3Q9NYJ7 618 aa11.7□□□□□ -0.54
CX3CL1-204ENST00000565912 TUBD1Q9UJT1 453 aa11.7□□□□□ -0.54
CX3CL1-204ENST00000565912 DSPPQ9NZW4 1301 aa11.7□□□□□ -0.54
CX3CL1-204ENST00000565912 FHL5Q5TD97 284 aa11.69□□□□□ -0.54
CX3CL1-204ENST00000565912 DCAF12L2Q5VW00 463 aa11.69□□□□□ -0.54
CX3CL1-204ENST00000565912 KLK15Q9H2R5 256 aa11.69□□□□□ -0.54
CX3CL1-204ENST00000565912 FSTP19883 344 aa11.69□□□□□ -0.54
CX3CL1-204ENST00000565912 PDLIM4P50479 330 aa11.69□□□□□ -0.54
CX3CL1-204ENST00000565912 DLX6P56179 175 aa11.69□□□□□ -0.54
CX3CL1-204ENST00000565912 MEIG1Q5JSS6 88 aa11.69□□□□□ -0.54
CX3CL1-204ENST00000565912 C8orf82Q6P1X6 216 aaPredicted RBP11.69□□□□□ -0.54
CX3CL1-204ENST00000565912 KLF14Q8TD94 323 aaPredicted RBP11.69□□□□□ -0.54
CX3CL1-204ENST00000565912 ZCCHC14Q8WYQ9 949 aaKnown RBP11.69□□□□□ -0.54
CX3CL1-204ENST00000565912 S1PR2O95136 353 aa11.69□□□□□ -0.54
CX3CL1-204ENST00000565912 LGALS3P17931 250 aaKnown RBP11.69□□□□□ -0.54
CX3CL1-204ENST00000565912 TMEM177Q53S58 311 aa11.69□□□□□ -0.54
CX3CL1-204ENST00000565912 DNLZQ5SXM8 178 aa11.69□□□□□ -0.54
CX3CL1-204ENST00000565912 GPR146Q96CH1 333 aa11.69□□□□□ -0.54
CX3CL1-204ENST00000565912 NEU1Q99519 415 aa11.69□□□□□ -0.54
CX3CL1-204ENST00000565912 MRPS18AQ9NVS2 196 aaKnown RBP11.69□□□□□ -0.54
CX3CL1-204ENST00000565912 HS3ST3B1Q9Y662 390 aa11.69□□□□□ -0.54
CX3CL1-204ENST00000565912 SCN4AP35499 1836 aa11.69□□□□□ -0.54
CX3CL1-204ENST00000565912 IGHV3-35A0A0C4DH35 117 aa11.69□□□□□ -0.54
CX3CL1-204ENST00000565912 PPP1R17O96001 155 aa11.69□□□□□ -0.54
CX3CL1-204ENST00000565912 KCNK17Q96T54 332 aa11.69□□□□□ -0.54
CX3CL1-204ENST00000565912 COL25A1Q9BXS0 654 aaPredicted RBP11.69□□□□□ -0.54
CX3CL1-204ENST00000565912 PILRAQ9UKJ1 303 aa11.69□□□□□ -0.54
CX3CL1-204ENST00000565912 TRAV30A0A087WSZ9 112 aa11.69□□□□□ -0.54
CX3CL1-204ENST00000565912 TMEM262E9PQX1 116 aa11.69□□□□□ -0.54
CX3CL1-204ENST00000565912 GZMMP51124 257 aa11.69□□□□□ -0.54
CX3CL1-204ENST00000565912 PKIAP61925 76 aa11.69□□□□□ -0.54
CX3CL1-204ENST00000565912 PNKDQ8N490 385 aa11.69□□□□□ -0.54
CX3CL1-204ENST00000565912 GALNT14Q96FL9 552 aa11.69□□□□□ -0.54
CX3CL1-204ENST00000565912 MEGF10Q96KG7 1140 aa11.69□□□□□ -0.54
CX3CL1-204ENST00000565912 GPR82Q96P67 336 aa11.69□□□□□ -0.54
CX3CL1-204ENST00000565912 MAP1LC3AQ9H492 121 aa11.69□□□□□ -0.54
CX3CL1-204ENST00000565912 FXYD3Q14802 87 aa11.68□□□□□ -0.54
CX3CL1-204ENST00000565912 ZNF56Q15929 161 aa11.68□□□□□ -0.54
CX3CL1-204ENST00000565912 SRSF12Q8WXF0 261 aaKnown RBP11.68□□□□□ -0.54
CX3CL1-204ENST00000565912 DNAJC4Q9NNZ3 241 aa11.68□□□□□ -0.54
CX3CL1-204ENST00000565912 GDF9O60383 454 aa11.68□□□□□ -0.54
CX3CL1-204ENST00000565912 C1QL1O75973 258 aa11.68□□□□□ -0.54
CX3CL1-204ENST00000565912 SP9P0CG40 484 aa11.68□□□□□ -0.54
CX3CL1-204ENST00000565912 SAP25Q8TEE9 199 aa11.68□□□□□ -0.54
CX3CL1-204ENST00000565912 SGK494Q96LW2 274 aa11.68□□□□□ -0.54
CX3CL1-204ENST00000565912 ALX4Q9H161 411 aaPredicted RBP11.68□□□□□ -0.54
CX3CL1-204ENST00000565912 ARFGEF1Q9Y6D6 1849 aa11.68□□□□□ -0.54
CX3CL1-204ENST00000565912 SMIM6P0DI80 62 aa11.68□□□□□ -0.54
CX3CL1-204ENST00000565912 MUC1P15941 1255 aaPredicted RBP11.68□□□□□ -0.54
CX3CL1-204ENST00000565912 IGHV1-69-2A0A0G2JMI3 117 aa11.68□□□□□ -0.54
CX3CL1-204ENST00000565912 HSPE1P61604 102 aaKnown RBP11.68□□□□□ -0.54
CX3CL1-204ENST00000565912 LINC01560Q8TB33 94 aa11.68□□□□□ -0.54
CX3CL1-204ENST00000565912 TAF15Q92804 592 aaKnown RBP eCLIP11.68□□□□□ -0.54
CX3CL1-204ENST00000565912 PILRBQ9UKJ0 227 aa11.68□□□□□ -0.54
CX3CL1-204ENST00000565912 SCN3AQ9NY46 2000 aa11.68□□□□□ -0.54
CX3CL1-204ENST00000565912 RBFOX2O43251 390 aaKnown RBP eCLIP11.67□□□□□ -0.54
CX3CL1-204ENST00000565912 OR9G1Q8NH87 305 aa11.67□□□□□ -0.54
CX3CL1-204ENST00000565912 QTRT1Q9BXR0 403 aaKnown RBP11.67□□□□□ -0.54
CX3CL1-204ENST00000565912 PKIBQ9C010 78 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms