RNA–Protein interactions for RNA: ENST00000565580.3

TCF4-229, Transcript of transcription factor 4, human

TSL 4

Gene TCF4, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-229	ENST00000565580	DYNC2H1	Q8NCM8	4307 aa	Known RBP	4.93	□□□□□ -1.62
TCF4-229	ENST00000565580	TRBV6-6	A0A0A6YYG2	114 aa		4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	IGKV1-6	A0A0C4DH72	117 aa		4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	NOTO	A8MTQ0	251 aa		4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	SLC17A2	O00624	439 aa		4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	OVOL1	O14753	267 aa		4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	RAB29	O14966	203 aa		4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	ATP6V1G2	O95670	118 aa		4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	SCT	P09683	121 aa		4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	OR8U8	P0C7N1	319 aa		4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	HSMCR30	P0CW71	290 aa		4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	ARSB	P15848	533 aa		4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	CEACAM6	P40199	344 aa		4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	MAP2K4	P45985	399 aa		4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	CRIP2	P52943	208 aa	Predicted RBP	4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	SLURP1	P55000	103 aa		4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	DCTN2	Q13561	401 aa	Known RBP	4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	TPBG	Q13641	420 aa		4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	PSG5	Q15238	335 aa		4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	PLAC9	Q5JTB6	97 aa		4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	ZNF660	Q6AZW8	331 aa	Predicted RBP	4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	MOB1B	Q7L9L4	216 aa		4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	FAM89B	Q8N5H3	189 aa		4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	DRAXIN	Q8NBI3	349 aa	Predicted RBP	4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	DLX4	Q92988	240 aa	Predicted RBP	4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	ARHGAP5-AS1	Q96IT6	56 aa		4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	CLCC1	Q96S66	551 aa		4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	PECR	Q9BY49	303 aa		4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	TOLLIP	Q9H0E2	274 aa		4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	VCX	Q9H320	206 aa		4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	DUSP21	Q9H596	190 aa		4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	PLGRKT	Q9HBL7	147 aa		4.92	□□□□□ -1.62
TCF4-229	ENST00000565580		Q9N2K0	584 aa		4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	ISYNA1	Q9NPH2	558 aa		4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	AP5S1	Q9NUS5	200 aa		4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	SCN3B	Q9NY72	215 aa		4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	RNF150	Q9ULK6	438 aa		4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	FOXA2	Q9Y261	457 aa	Predicted RBP	4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	ZNF256	Q9Y2P7	627 aa	Predicted RBP	4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	NUBP2	Q9Y5Y2	271 aa		4.92	□□□□□ -1.62
TCF4-229	ENST00000565580		U3KQK5	164 aa		4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	RYR2	Q92736	4967 aa		4.92	□□□□□ -1.62
TCF4-229	ENST00000565580	IGHV4OR15-8	A0A075B7B6	117 aa		4.91	□□□□□ -1.62
TCF4-229	ENST00000565580		A0A087WW49	117 aa		4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	TMEM272	A0A1B0GTI8	110 aa		4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	OR5H14	A6NHG9	310 aa		4.91	□□□□□ -1.62
TCF4-229	ENST00000565580		H7C2Y5	167 aa		4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	ITGB1BP1	O14713	200 aa		4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	LDLRAD4	O15165	306 aa		4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	LY86	O95711	162 aa		4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	CA2	P00918	260 aa		4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	IGHV3-11	P01762	117 aa		4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	IGKV1-16	P04430	117 aa		4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	LGALS1	P09382	135 aa	Known RBP	4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	CD3G	P09693	182 aa		4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	NHLRC4	P0CG21	123 aa	Predicted RBP	4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	CALR	P27797	417 aa	Known RBP	4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	VEGFC	P49767	419 aa		4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	SSBP2	P81877	361 aa	Predicted RBP	4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	FABP5	Q01469	135 aa		4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	PLGLA	Q15195	96 aa		4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	RAB11B	Q15907	218 aa		4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	C2orf76	Q3KRA6	126 aa		4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	MOGAT2	Q3SYC2	334 aa		4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	HES5	Q5TA89	166 aa		4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	KRTAP5-3	Q6L8H2	238 aa		4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	CD200R1L	Q6Q8B3	271 aa		4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	PPP1R27	Q86WC6	154 aa		4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	ZNF383	Q8NA42	475 aa		4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	LFNG	Q8NES3	379 aa		4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	OR5AN1	Q8NGI8	311 aa		4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	ABHD5	Q8WTS1	349 aa		4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	ARPC1A	Q92747	370 aa		4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	PTX4	Q96A99	478 aa		4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	C5orf30	Q96GV9	206 aa		4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	MS4A10	Q96PG2	267 aa		4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	URM1	Q9BTM9	101 aa	Known RBP	4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	RIMS4	Q9H426	269 aa	Predicted RBP	4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	C12orf4	Q9NQ89	552 aa		4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	METTL1	Q9UBP6	276 aa	Known RBP	4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	HSF4	Q9ULV5	492 aa		4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	KCNK7	Q9Y2U2	307 aa		4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	WASHC3	Q9Y3C0	194 aa		4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	TPRKB	Q9Y3C4	175 aa		4.91	□□□□□ -1.62
TCF4-229	ENST00000565580	TRDC	B7Z8K6	153 aa		4.9	□□□□□ -1.63
TCF4-229	ENST00000565580	LINC01619	G3V211	115 aa		4.9	□□□□□ -1.63
TCF4-229	ENST00000565580		M0R1X1	148 aa		4.9	□□□□□ -1.63
TCF4-229	ENST00000565580	ARPC1B	O15143	372 aa	Known RBP	4.9	□□□□□ -1.63
TCF4-229	ENST00000565580	HSPA12A	O43301	675 aa		4.9	□□□□□ -1.63
TCF4-229	ENST00000565580	RGS10	O43665	173 aa		4.9	□□□□□ -1.63
TCF4-229	ENST00000565580	SLC25A17	O43808	307 aa		4.9	□□□□□ -1.63
TCF4-229	ENST00000565580	SAP30	O75446	220 aa		4.9	□□□□□ -1.63
TCF4-229	ENST00000565580	RBBP9	O75884	186 aa		4.9	□□□□□ -1.63
TCF4-229	ENST00000565580	ARL6IP5	O75915	188 aa		4.9	□□□□□ -1.63
TCF4-229	ENST00000565580	SPN	P16150	400 aa		4.9	□□□□□ -1.63
TCF4-229	ENST00000565580	CPE	P16870	476 aa		4.9	□□□□□ -1.63
TCF4-229	ENST00000565580	ZBTB25	P24278	435 aa		4.9	□□□□□ -1.63
TCF4-229	ENST00000565580	CRHBP	P24387	322 aa		4.9	□□□□□ -1.63
TCF4-229	ENST00000565580	MC5R	P33032	325 aa		4.9	□□□□□ -1.63
TCF4-229	ENST00000565580	INSL3	P51460	131 aa		4.9	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms