RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 TAS2R20P59543 309 aa10.7□□□□□ -0.7
VPS9D1-204ENST00000565023 PLGLAQ15195 96 aa10.7□□□□□ -0.7
VPS9D1-204ENST00000565023 DEFB136Q30KP8 78 aa10.7□□□□□ -0.7
VPS9D1-204ENST00000565023 KPRPQ5T749 579 aaPredicted RBP10.7□□□□□ -0.7
VPS9D1-204ENST00000565023 FAM71F2Q6NXP2 309 aa10.7□□□□□ -0.7
VPS9D1-204ENST00000565023 ZNF695Q8IW36 515 aa10.7□□□□□ -0.7
VPS9D1-204ENST00000565023 MRPL41Q8IXM3 137 aaKnown RBP10.7□□□□□ -0.7
VPS9D1-204ENST00000565023 WFDC9Q8NEX5 89 aa10.7□□□□□ -0.7
VPS9D1-204ENST00000565023 OR10J5Q8NHC4 309 aa10.7□□□□□ -0.7
VPS9D1-204ENST00000565023 ABHD5Q8WTS1 349 aa10.7□□□□□ -0.7
VPS9D1-204ENST00000565023 RBM38Q9H0Z9 239 aaKnown RBP10.7□□□□□ -0.7
VPS9D1-204ENST00000565023 FBXL15Q9H469 300 aa10.7□□□□□ -0.7
VPS9D1-204ENST00000565023 AURKAIP1Q9NWT8 199 aaPredicted RBP10.7□□□□□ -0.7
VPS9D1-204ENST00000565023 ANXA10Q9UJ72 324 aa10.7□□□□□ -0.7
VPS9D1-204ENST00000565023 G3V318 75 aa10.69□□□□□ -0.7
VPS9D1-204ENST00000565023 ATP6V0E1O15342 81 aa10.69□□□□□ -0.7
VPS9D1-204ENST00000565023 CTXN2P0C2S0 81 aa10.69□□□□□ -0.7
VPS9D1-204ENST00000565023 HOXD3P31249 432 aaPredicted RBP10.69□□□□□ -0.7
VPS9D1-204ENST00000565023 THBS3P49746 956 aa10.69□□□□□ -0.7
VPS9D1-204ENST00000565023 LINC00205P59089 165 aa10.69□□□□□ -0.7
VPS9D1-204ENST00000565023 C5orf64Q2M2E5 130 aa10.69□□□□□ -0.7
VPS9D1-204ENST00000565023 CNIH2Q6PI25 160 aa10.69□□□□□ -0.7
VPS9D1-204ENST00000565023 HOGA1Q86XE5 327 aa10.69□□□□□ -0.7
VPS9D1-204ENST00000565023 COMMD1Q8N668 190 aa10.69□□□□□ -0.7
VPS9D1-204ENST00000565023 GVQW1Q8N7I0 195 aa10.69□□□□□ -0.7
VPS9D1-204ENST00000565023 LINC00482Q8N8I6 264 aa10.69□□□□□ -0.7
VPS9D1-204ENST00000565023 CLCC1Q96S66 551 aa10.69□□□□□ -0.7
VPS9D1-204ENST00000565023 GON7Q9BXV9 100 aa10.69□□□□□ -0.7
VPS9D1-204ENST00000565023 ZFP57Q9NU63 452 aa10.69□□□□□ -0.7
VPS9D1-204ENST00000565023 NECAP2Q9NVZ3 263 aa10.69□□□□□ -0.7
VPS9D1-204ENST00000565023 CCDC59Q9P031 241 aaKnown RBP10.69□□□□□ -0.7
VPS9D1-204ENST00000565023 ZNF221Q9UK13 617 aa10.69□□□□□ -0.7
VPS9D1-204ENST00000565023 A3GALT2U3KPV4 340 aa10.69□□□□□ -0.7
VPS9D1-204ENST00000565023 SMIM31A0A1B0GVY4 71 aa10.68□□□□□ -0.7
VPS9D1-204ENST00000565023 H0YJW9 148 aa10.68□□□□□ -0.7
VPS9D1-204ENST00000565023 PROP1O75360 226 aa10.68□□□□□ -0.7
VPS9D1-204ENST00000565023 CBX5P45973 191 aa10.68□□□□□ -0.7
VPS9D1-204ENST00000565023 ECSCRQ19T08 205 aa10.68□□□□□ -0.7
VPS9D1-204ENST00000565023 LIN54Q6MZP7 749 aa10.68□□□□□ -0.7
VPS9D1-204ENST00000565023 H1FOOQ8IZA3 346 aaPredicted RBP10.68□□□□□ -0.7
VPS9D1-204ENST00000565023 BEST4Q8NFU0 473 aa10.68□□□□□ -0.7
VPS9D1-204ENST00000565023 RCC1LQ96I51 464 aaKnown RBP10.68□□□□□ -0.7
VPS9D1-204ENST00000565023 GINS4Q9BRT9 223 aa10.68□□□□□ -0.7
VPS9D1-204ENST00000565023 OR51J1Q9H342 316 aa10.68□□□□□ -0.7
VPS9D1-204ENST00000565023 ANAPC10Q9UM13 185 aa10.68□□□□□ -0.7
VPS9D1-204ENST00000565023 WASHC3Q9Y3C0 194 aa10.68□□□□□ -0.7
VPS9D1-204ENST00000565023 RBM7Q9Y580 266 aaKnown RBP10.68□□□□□ -0.7
VPS9D1-204ENST00000565023 IGHV7-81A0A0B4J1V7 117 aa10.67□□□□□ -0.7
VPS9D1-204ENST00000565023 OR5H14A6NHG9 310 aa10.67□□□□□ -0.7
VPS9D1-204ENST00000565023 J3QRK9 145 aa10.67□□□□□ -0.7
VPS9D1-204ENST00000565023 M0R1X1 148 aa10.67□□□□□ -0.7
VPS9D1-204ENST00000565023 OR8U9P0C7N5 309 aa10.67□□□□□ -0.7
VPS9D1-204ENST00000565023 PRSS3P35030 304 aa10.67□□□□□ -0.7
VPS9D1-204ENST00000565023 MYCNOSP40205 109 aa10.67□□□□□ -0.7
VPS9D1-204ENST00000565023 FOXE3Q13461 319 aa10.67□□□□□ -0.7
VPS9D1-204ENST00000565023 OR8U1Q8NH10 309 aa10.67□□□□□ -0.7
VPS9D1-204ENST00000565023 SNAPC3Q92966 411 aa10.67□□□□□ -0.7
VPS9D1-204ENST00000565023 RAX2Q96IS3 184 aa10.67□□□□□ -0.7
VPS9D1-204ENST00000565023 OR5B12Q96R08 314 aa10.67□□□□□ -0.7
VPS9D1-204ENST00000565023 SLIRPQ9GZT3 109 aaKnown RBP10.67□□□□□ -0.7
VPS9D1-204ENST00000565023 OR2D2Q9H210 308 aa10.67□□□□□ -0.7
VPS9D1-204ENST00000565023 MIXL1Q9H2W2 232 aa10.67□□□□□ -0.7
VPS9D1-204ENST00000565023 GAB2Q9UQC2 676 aa10.67□□□□□ -0.7
VPS9D1-204ENST00000565023 MEIS3P1A6NDR6 274 aa10.66□□□□□ -0.7
VPS9D1-204ENST00000565023 FAM25AB3EWG3 89 aa10.66□□□□□ -0.7
VPS9D1-204ENST00000565023 FAM25CB3EWG5 89 aa10.66□□□□□ -0.7
VPS9D1-204ENST00000565023 FAM25GB3EWG6 89 aa10.66□□□□□ -0.7
VPS9D1-204ENST00000565023 ZNF701M0R085 212 aaPredicted RBP10.66□□□□□ -0.7
VPS9D1-204ENST00000565023 CCL24O00175 119 aa10.66□□□□□ -0.7
VPS9D1-204ENST00000565023 CTDSP2O14595 271 aa10.66□□□□□ -0.7
VPS9D1-204ENST00000565023 RRHO14718 337 aa10.66□□□□□ -0.7
VPS9D1-204ENST00000565023 TPPPO94811 219 aa10.66□□□□□ -0.7
VPS9D1-204ENST00000565023 HLA-DRB1P01911 266 aa10.66□□□□□ -0.7
VPS9D1-204ENST00000565023 ELANEP08246 267 aa10.66□□□□□ -0.7
VPS9D1-204ENST00000565023 RPS16P62249 146 aaKnown RBP10.66□□□□□ -0.7
VPS9D1-204ENST00000565023 NDPQ00604 133 aa10.66□□□□□ -0.7
VPS9D1-204ENST00000565023 CFHR3Q02985 330 aa10.66□□□□□ -0.7
VPS9D1-204ENST00000565023 TMEM65Q6PI78 240 aa10.66□□□□□ -0.7
VPS9D1-204ENST00000565023 REC114Q7Z4M0 266 aa10.66□□□□□ -0.7
VPS9D1-204ENST00000565023 ZNF383Q8NA42 475 aa10.66□□□□□ -0.7
VPS9D1-204ENST00000565023 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.66□□□□□ -0.7
VPS9D1-204ENST00000565023 NPBQ8NG41 125 aa10.66□□□□□ -0.7
VPS9D1-204ENST00000565023 GPX8Q8TED1 209 aa10.66□□□□□ -0.7
VPS9D1-204ENST00000565023 CASTOR1Q8WTX7 329 aa10.66□□□□□ -0.7
VPS9D1-204ENST00000565023 SCPEP1Q9HB40 452 aa10.66□□□□□ -0.7
VPS9D1-204ENST00000565023 RSL24D1Q9UHA3 163 aaKnown RBP10.66□□□□□ -0.7
VPS9D1-204ENST00000565023 ADAM30Q9UKF2 790 aa10.66□□□□□ -0.7
VPS9D1-204ENST00000565023 MRPS7Q9Y2R9 242 aaKnown RBP10.66□□□□□ -0.7
VPS9D1-204ENST00000565023 TRAV41A0A0B4J266 112 aa10.65□□□□□ -0.7
VPS9D1-204ENST00000565023 A0A1W2PN81 502 aa10.65□□□□□ -0.7
VPS9D1-204ENST00000565023 CCDC160A6NGH7 325 aa10.65□□□□□ -0.7
VPS9D1-204ENST00000565023 FCN1O00602 326 aa10.65□□□□□ -0.7
VPS9D1-204ENST00000565023 TUSC2O75896 110 aa10.65□□□□□ -0.7
VPS9D1-204ENST00000565023 NDUFA3O95167 84 aa10.65□□□□□ -0.7
VPS9D1-204ENST00000565023 IGHG4P01861 327 aa10.65□□□□□ -0.7
VPS9D1-204ENST00000565023 APOA2P02652 100 aa10.65□□□□□ -0.7
VPS9D1-204ENST00000565023 IGF1P05019 195 aa10.65□□□□□ -0.7
VPS9D1-204ENST00000565023 OR5H8P0DN80 308 aa10.65□□□□□ -0.7
VPS9D1-204ENST00000565023 NAT1P18440 290 aa10.65□□□□□ -0.7
VPS9D1-204ENST00000565023 NFYAP23511 347 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms