RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 ZNF550Q7Z398 422 aa5.35□□□□□ -1.55
PTPN9-204ENST00000564970 SPATA12Q7Z6I5 190 aa5.35□□□□□ -1.55
PTPN9-204ENST00000564970 LYPD6Q86Y78 171 aa5.35□□□□□ -1.55
PTPN9-204ENST00000564970 TMEM25Q86YD3 366 aa5.35□□□□□ -1.55
PTPN9-204ENST00000564970 ZNF645Q8N7E2 425 aa5.35□□□□□ -1.55
PTPN9-204ENST00000564970 OR8B12Q8NGG6 310 aa5.35□□□□□ -1.55
PTPN9-204ENST00000564970 OR5C1Q8NGR4 320 aa5.35□□□□□ -1.55
PTPN9-204ENST00000564970 OR10G6Q8NH81 332 aa5.35□□□□□ -1.55
PTPN9-204ENST00000564970 PPP1R35Q8TAP8 253 aa5.35□□□□□ -1.55
PTPN9-204ENST00000564970 ZNRF4Q8WWF5 429 aa5.35□□□□□ -1.55
PTPN9-204ENST00000564970 LHX4Q969G2 390 aa5.35□□□□□ -1.55
PTPN9-204ENST00000564970 PIGTQ969N2 578 aa5.35□□□□□ -1.55
PTPN9-204ENST00000564970 SCARF2Q96GP6 870 aaPredicted RBP5.35□□□□□ -1.55
PTPN9-204ENST00000564970 PRSS27Q9BQR3 290 aa5.35□□□□□ -1.55
PTPN9-204ENST00000564970 R3HDMLQ9H3Y0 253 aa5.35□□□□□ -1.55
PTPN9-204ENST00000564970 FNDC4Q9H6D8 234 aaPredicted RBP5.35□□□□□ -1.55
PTPN9-204ENST00000564970 ZNF665Q9H7R5 613 aa5.35□□□□□ -1.55
PTPN9-204ENST00000564970 ELOVL3Q9HB03 270 aa5.35□□□□□ -1.55
PTPN9-204ENST00000564970 HES4Q9HCC6 221 aa5.35□□□□□ -1.55
PTPN9-204ENST00000564970 OR1A1Q9P1Q5 309 aa5.35□□□□□ -1.55
PTPN9-204ENST00000564970 B4GALT6Q9UBX8 382 aa5.35□□□□□ -1.55
PTPN9-204ENST00000564970 DUSP13Q9UII6 198 aa5.35□□□□□ -1.55
PTPN9-204ENST00000564970 MRPS17Q9Y2R5 130 aaKnown RBP5.35□□□□□ -1.55
PTPN9-204ENST00000564970 ARL2-SNX15V9GYD0 113 aa5.35□□□□□ -1.55
PTPN9-204ENST00000564970 UNC79Q9P2D8 2635 aa5.35□□□□□ -1.55
PTPN9-204ENST00000564970 SCN1AP35498 2009 aa5.35□□□□□ -1.55
PTPN9-204ENST00000564970 GREB1Q4ZG55 1949 aa5.35□□□□□ -1.55
PTPN9-204ENST00000564970 EYSQ5T1H1 3165 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 PRUNE2Q8WUY3 3088 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 DNAJC25-GNG10A0A024R161 153 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 TRAV36DV7A0A075B6V5 113 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 CXorf51AA0A1B0GTR3 108 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 A0A1B0GV50 99 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 SPAARA0A1B0GVQ0 90 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 A0A1W2PRE2 83 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 GRIFINA4D1Z8 144 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 C21orf140B9A014 251 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 SYS1-DBNDD2H3BUS1 97 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 H3BUT2 72 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 SH2D1BO14796 132 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 SOCS1O15524 211 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 DNPH1O43598 174 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 CEACAM4O75871 244 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 MOSP00540 346 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 CA1P00915 261 aaPredicted RBP5.34□□□□□ -1.55
PTPN9-204ENST00000564970 AMY1AP04745 511 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 SMIM13P0DJ93 91 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 IGFBP2P18065 325 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 ALOX5APP20292 161 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 PTGDSP41222 190 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 FUT6P51993 359 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 CLRN1P58418 232 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 CX3CL1P78423 397 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 QRFPP83859 136 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 POU3F1Q03052 451 aaPredicted RBP5.34□□□□□ -1.55
PTPN9-204ENST00000564970 FOXI1Q12951 378 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 TAF10Q12962 218 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 EDDM3AQ14507 147 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 MRPL23Q16540 153 aaKnown RBP5.34□□□□□ -1.55
PTPN9-204ENST00000564970 ALKBH6Q3KRA9 238 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 SLC25A53Q5H9E4 307 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 ARTNQ5T4W7 220 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 LINC01590Q5TEZ4 76 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 FAM69BQ5VUD6 431 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 TMEM215Q68D42 235 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 TMEM136Q6ZRR5 245 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 C1QL2Q7Z5L3 287 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 TPRX1Q8N7U7 411 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 LINC01555Q8NAE3 123 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 SYT8Q8NBV8 401 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 ZNRF2Q8NHG8 242 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 TSKUQ8WUA8 353 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 TMEM190Q8WZ59 177 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 PERPQ96FX8 193 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 Q96M85 177 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 TNFRSF13CQ96RJ3 184 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 FAM103A1Q9BTL3 118 aaKnown RBP5.34□□□□□ -1.55
PTPN9-204ENST00000564970 CFHR5Q9BXR6 569 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 LINC00597Q9H2U6 94 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 CRIM1Q9NZV1 1036 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 CLCF1Q9UBD9 225 aa5.34□□□□□ -1.55
PTPN9-204ENST00000564970 YTHDF2Q9Y5A9 579 aaKnown RBP5.34□□□□□ -1.55
PTPN9-204ENST00000564970 SNURFLB1AK76 121 aa5.33□□□□□ -1.56
PTPN9-204ENST00000564970 VWC2LB2RUY7 222 aa5.33□□□□□ -1.56
PTPN9-204ENST00000564970 FAM90A26D6RGX4 464 aa5.33□□□□□ -1.56
PTPN9-204ENST00000564970 FNDC10F2Z333 226 aa5.33□□□□□ -1.56
PTPN9-204ENST00000564970 CLDN5O00501 218 aa5.33□□□□□ -1.56
PTPN9-204ENST00000564970 ORM1P02763 201 aa5.33□□□□□ -1.56
PTPN9-204ENST00000564970 KLK1P06870 262 aa5.33□□□□□ -1.56
PTPN9-204ENST00000564970 PRSS56P0CW18 603 aa5.33□□□□□ -1.56
PTPN9-204ENST00000564970 SELPP16109 830 aa5.33□□□□□ -1.56
PTPN9-204ENST00000564970 SRIP30626 198 aa5.33□□□□□ -1.56
PTPN9-204ENST00000564970 G6PCP35575 357 aa5.33□□□□□ -1.56
PTPN9-204ENST00000564970 ZNF133P52736 654 aaPredicted RBP5.33□□□□□ -1.56
PTPN9-204ENST00000564970 PAX9P55771 341 aa5.33□□□□□ -1.56
PTPN9-204ENST00000564970 RPL8P62917 257 aaKnown RBP5.33□□□□□ -1.56
PTPN9-204ENST00000564970 TGFBR3Q03167 851 aa5.33□□□□□ -1.56
PTPN9-204ENST00000564970 PLP2Q04941 152 aa5.33□□□□□ -1.56
PTPN9-204ENST00000564970 KIR3DS1Q14943 382 aa5.33□□□□□ -1.56
PTPN9-204ENST00000564970 ZNF146Q15072 292 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms