RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 MSI2Q96DH6 328 aaKnown RBP9.01□□□□□ -0.97
SF3B3-205ENST00000564899 S1PR3Q99500 378 aa9.01□□□□□ -0.97
SF3B3-205ENST00000564899 OR51J1Q9H342 316 aa9.01□□□□□ -0.97
SF3B3-205ENST00000564899 LIN7CQ9NUP9 197 aaKnown RBP9.01□□□□□ -0.97
SF3B3-205ENST00000564899 GAB2Q9UQC2 676 aa9.01□□□□□ -0.97
SF3B3-205ENST00000564899 KCNIP3Q9Y2W7 256 aa9.01□□□□□ -0.97
SF3B3-205ENST00000564899 AMMECR1Q9Y4X0 333 aaPredicted RBP9.01□□□□□ -0.97
SF3B3-205ENST00000564899 AUP1Q9Y679 476 aa9.01□□□□□ -0.97
SF3B3-205ENST00000564899 DOCK11Q5JSL3 2073 aa9□□□□□ -0.97
SF3B3-205ENST00000564899 ODF3BA8MYP8 253 aa9□□□□□ -0.97
SF3B3-205ENST00000564899 RNASEK-C17orf49H0YIS7 233 aa9□□□□□ -0.97
SF3B3-205ENST00000564899 KCNAB3O43448 404 aa9□□□□□ -0.97
SF3B3-205ENST00000564899 SSNA1O43805 119 aa9□□□□□ -0.97
SF3B3-205ENST00000564899 TGFAP01135 160 aa9□□□□□ -0.97
SF3B3-205ENST00000564899 IGLV1-47P01700 117 aa9□□□□□ -0.97
SF3B3-205ENST00000564899 OR5AC1P0C628 307 aa9□□□□□ -0.97
SF3B3-205ENST00000564899 ZNF16P17020 682 aaPredicted RBP9□□□□□ -0.97
SF3B3-205ENST00000564899 F2RP25116 425 aa9□□□□□ -0.97
SF3B3-205ENST00000564899 CATR1Q13166 79 aa9□□□□□ -0.97
SF3B3-205ENST00000564899 EIF4EBP1Q13541 118 aaPredicted RBP9□□□□□ -0.97
SF3B3-205ENST00000564899 ZNF833PQ6ZTB9 187 aa9□□□□□ -0.97
SF3B3-205ENST00000564899 KCTD9Q7L273 389 aa9□□□□□ -0.97
SF3B3-205ENST00000564899 OR4P4Q8NGL7 312 aa9□□□□□ -0.97
SF3B3-205ENST00000564899 TCTEX1D2Q8WW35 142 aa9□□□□□ -0.97
SF3B3-205ENST00000564899 LHX4Q969G2 390 aa9□□□□□ -0.97
SF3B3-205ENST00000564899 GALNT14Q96FL9 552 aa9□□□□□ -0.97
SF3B3-205ENST00000564899 HSD17B10Q99714 261 aaKnown RBP9□□□□□ -0.97
SF3B3-205ENST00000564899 ZNF251Q9BRH9 671 aa9□□□□□ -0.97
SF3B3-205ENST00000564899 A0A1W2PRD5 423 aa8.99□□□□□ -0.97
SF3B3-205ENST00000564899 A0A1W2PRF3 423 aa8.99□□□□□ -0.97
SF3B3-205ENST00000564899 A0A1W2PRM7 423 aa8.99□□□□□ -0.97
SF3B3-205ENST00000564899 H0Y980 276 aa8.99□□□□□ -0.97
SF3B3-205ENST00000564899 BUB1B-PAK6H3BSN5 160 aa8.99□□□□□ -0.97
SF3B3-205ENST00000564899 J3QLI3 93 aa8.99□□□□□ -0.97
SF3B3-205ENST00000564899 PROP1O75360 226 aa8.99□□□□□ -0.97
SF3B3-205ENST00000564899 B3GALNT1O75752 331 aa8.99□□□□□ -0.97
SF3B3-205ENST00000564899 DUS4LO95620 317 aaKnown RBP8.99□□□□□ -0.97
SF3B3-205ENST00000564899 DUTP33316 252 aaKnown RBP8.99□□□□□ -0.97
SF3B3-205ENST00000564899 THBS3P49746 956 aa8.99□□□□□ -0.97
SF3B3-205ENST00000564899 BCAP31P51572 246 aa8.99□□□□□ -0.97
SF3B3-205ENST00000564899 ZNF137PP52743 207 aa8.99□□□□□ -0.97
SF3B3-205ENST00000564899 RPL30P62888 115 aaKnown RBP8.99□□□□□ -0.97
SF3B3-205ENST00000564899 TMEM187Q14656 261 aa8.99□□□□□ -0.97
SF3B3-205ENST00000564899 SP6Q3SY56 376 aa8.99□□□□□ -0.97
SF3B3-205ENST00000564899 CYB5R2Q6BCY4 276 aa8.99□□□□□ -0.97
SF3B3-205ENST00000564899 FAM71F2Q6NXP2 309 aa8.99□□□□□ -0.97
SF3B3-205ENST00000564899 C1orf229Q6ZS94 237 aaPredicted RBP8.99□□□□□ -0.97
SF3B3-205ENST00000564899 CADM3Q8N126 398 aa8.99□□□□□ -0.97
SF3B3-205ENST00000564899 C12orf45Q8N5I9 185 aaPredicted RBP8.99□□□□□ -0.97
SF3B3-205ENST00000564899 DRAXINQ8NBI3 349 aaPredicted RBP8.99□□□□□ -0.97
SF3B3-205ENST00000564899 UXS1Q8NBZ7 420 aa8.99□□□□□ -0.97
SF3B3-205ENST00000564899 COQ8AQ8NI60 647 aa8.99□□□□□ -0.97
SF3B3-205ENST00000564899 MITD1Q8WV92 249 aa8.99□□□□□ -0.97
SF3B3-205ENST00000564899 TP53RKQ96S44 253 aa8.99□□□□□ -0.97
SF3B3-205ENST00000564899 PHB2Q99623 299 aa8.99□□□□□ -0.97
SF3B3-205ENST00000564899 MED28Q9H204 178 aa8.99□□□□□ -0.97
SF3B3-205ENST00000564899 C7orf69Q9H7B7 122 aa8.99□□□□□ -0.97
SF3B3-205ENST00000564899 PRR13Q9NZ81 148 aa8.99□□□□□ -0.97
SF3B3-205ENST00000564899 ARHGAP32A7KAX9 2087 aa8.99□□□□□ -0.97
SF3B3-205ENST00000564899 TRRAPQ9Y4A5 3859 aa8.99□□□□□ -0.97
SF3B3-205ENST00000564899 LINC00473A8K010 186 aa8.98□□□□□ -0.97
SF3B3-205ENST00000564899 HTR1DP28221 377 aa8.98□□□□□ -0.97
SF3B3-205ENST00000564899 REG1BP48304 166 aa8.98□□□□□ -0.97
SF3B3-205ENST00000564899 UBE2E1P51965 193 aa8.98□□□□□ -0.97
SF3B3-205ENST00000564899 LGALS4P56470 323 aa8.98□□□□□ -0.97
SF3B3-205ENST00000564899 LINC00205P59089 165 aa8.98□□□□□ -0.97
SF3B3-205ENST00000564899 RRAS2P62070 204 aaPredicted RBP8.98□□□□□ -0.97
SF3B3-205ENST00000564899 SRPXP78539 464 aa8.98□□□□□ -0.97
SF3B3-205ENST00000564899 ANKRD55Q3KP44 614 aa8.98□□□□□ -0.97
SF3B3-205ENST00000564899 OR2B11Q5JQS5 317 aa8.98□□□□□ -0.97
SF3B3-205ENST00000564899 LIN54Q6MZP7 749 aa8.98□□□□□ -0.97
SF3B3-205ENST00000564899 LIAT1Q6ZQX7 453 aa8.98□□□□□ -0.97
SF3B3-205ENST00000564899 TGIF2LXQ8IUE1 241 aa8.98□□□□□ -0.97
SF3B3-205ENST00000564899 ST6GALNAC6Q969X2 333 aa8.98□□□□□ -0.97
SF3B3-205ENST00000564899 RPEQ96AT9 228 aa8.98□□□□□ -0.97
SF3B3-205ENST00000564899 ADTRPQ96IZ2 230 aa8.98□□□□□ -0.97
SF3B3-205ENST00000564899 MRPL20Q9BYC9 149 aaKnown RBP8.98□□□□□ -0.97
SF3B3-205ENST00000564899 TMEM222Q9H0R3 208 aa8.98□□□□□ -0.97
SF3B3-205ENST00000564899 DPM3Q9P2X0 92 aa8.98□□□□□ -0.97
SF3B3-205ENST00000564899 TRAV40A0A0B4J280 105 aa8.97□□□□□ -0.97
SF3B3-205ENST00000564899 A0A0B4J2A0 478 aa8.97□□□□□ -0.97
SF3B3-205ENST00000564899 CENPVL3A0A0U1RRI6 287 aa8.97□□□□□ -0.97
SF3B3-205ENST00000564899 LEUTXA8MZ59 168 aa8.97□□□□□ -0.97
SF3B3-205ENST00000564899 TXNL1O43396 289 aa8.97□□□□□ -0.97
SF3B3-205ENST00000564899 FCGR3BO75015 233 aa8.97□□□□□ -0.97
SF3B3-205ENST00000564899 SERPINE2P07093 398 aa8.97□□□□□ -0.97
SF3B3-205ENST00000564899 CT45A6P0DMU7 189 aa8.97□□□□□ -0.97
SF3B3-205ENST00000564899 CT45A5P0DMU8 189 aa8.97□□□□□ -0.97
SF3B3-205ENST00000564899 CT45A7P0DMV0 189 aa8.97□□□□□ -0.97
SF3B3-205ENST00000564899 UCP1P25874 307 aa8.97□□□□□ -0.97
SF3B3-205ENST00000564899 CEACAM3P40198 252 aa8.97□□□□□ -0.97
SF3B3-205ENST00000564899 DIAPH2-AS1Q14236 149 aa8.97□□□□□ -0.97
SF3B3-205ENST00000564899 FCN2Q15485 313 aa8.97□□□□□ -0.97
SF3B3-205ENST00000564899 TPTE2P1Q5T6R2 138 aa8.97□□□□□ -0.97
SF3B3-205ENST00000564899 MINOS1Q5TGZ0 78 aa8.97□□□□□ -0.97
SF3B3-205ENST00000564899 LHFPL4Q7Z7J7 247 aa8.97□□□□□ -0.97
SF3B3-205ENST00000564899 SPAG16Q8N0X2 631 aa8.97□□□□□ -0.97
SF3B3-205ENST00000564899 LGI3Q8N145 548 aa8.97□□□□□ -0.97
SF3B3-205ENST00000564899 TCTEX1D1Q8N7M0 179 aa8.97□□□□□ -0.97
SF3B3-205ENST00000564899 ZNF383Q8NA42 475 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms