RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 HPRT1P00492 218 aa16.04■□□□□ 0.16
CLN6-205ENST00000564846 KRASP01116 189 aa16.04■□□□□ 0.16
CLN6-205ENST00000564846 MMP9P14780 707 aa16.04■□□□□ 0.16
CLN6-205ENST00000564846 THBS3P49746 956 aa16.04■□□□□ 0.16
CLN6-205ENST00000564846 LINC00205P59089 165 aa16.04■□□□□ 0.16
CLN6-205ENST00000564846 GPR157Q5UAW9 335 aa16.04■□□□□ 0.16
CLN6-205ENST00000564846 Q6ZRM9 215 aa16.04■□□□□ 0.16
CLN6-205ENST00000564846 C8orf46Q8TAG6 207 aa16.04■□□□□ 0.16
CLN6-205ENST00000564846 ZNF471Q9BX82 626 aaPredicted RBP16.04■□□□□ 0.16
CLN6-205ENST00000564846 TAAR5O14804 337 aa16.03■□□□□ 0.16
CLN6-205ENST00000564846 P0C879 139 aa16.03■□□□□ 0.16
CLN6-205ENST00000564846 HTR2BP41595 481 aa16.03■□□□□ 0.16
CLN6-205ENST00000564846 ZNF596Q8TC21 504 aa16.03■□□□□ 0.16
CLN6-205ENST00000564846 ST8SIA2Q92186 375 aa16.03■□□□□ 0.16
CLN6-205ENST00000564846 DDB2Q92466 427 aa16.03■□□□□ 0.16
CLN6-205ENST00000564846 C11orf1Q9H5F2 150 aa16.03■□□□□ 0.16
CLN6-205ENST00000564846 PATZ1Q9HBE1 687 aaKnown RBP16.03■□□□□ 0.16
CLN6-205ENST00000564846 WRBO00258 174 aa16.03■□□□□ 0.16
CLN6-205ENST00000564846 FCGR3BO75015 233 aa16.03■□□□□ 0.16
CLN6-205ENST00000564846 SPDEFO95238 335 aa16.03■□□□□ 0.16
CLN6-205ENST00000564846 IGHV1-8P0DP01 117 aa16.03■□□□□ 0.16
CLN6-205ENST00000564846 G6PCP35575 357 aa16.03■□□□□ 0.16
CLN6-205ENST00000564846 GPR6P46095 362 aaPredicted RBP16.03■□□□□ 0.16
CLN6-205ENST00000564846 IZUMO4Q1ZYL8 232 aa16.03■□□□□ 0.16
CLN6-205ENST00000564846 C1orf229Q6ZS94 237 aaPredicted RBP16.03■□□□□ 0.16
CLN6-205ENST00000564846 LINC00311Q8N616 119 aa16.03■□□□□ 0.16
CLN6-205ENST00000564846 SSSCA1O60232 199 aa16.02■□□□□ 0.15
CLN6-205ENST00000564846 GPR137BO60478 399 aa16.02■□□□□ 0.15
CLN6-205ENST00000564846 RBP4P02753 201 aa16.02■□□□□ 0.15
CLN6-205ENST00000564846 VAMP2P63027 116 aa16.02■□□□□ 0.15
CLN6-205ENST00000564846 OR8H3Q8N146 312 aa16.02■□□□□ 0.15
CLN6-205ENST00000564846 C11orf42Q8N5U0 333 aa16.02■□□□□ 0.15
CLN6-205ENST00000564846 MAGT1Q9H0U3 335 aa16.02■□□□□ 0.15
CLN6-205ENST00000564846 LRBAP50851 2863 aa16.02■□□□□ 0.15
CLN6-205ENST00000564846 PPIAL4CA0A0B4J2A2 164 aa16.01■□□□□ 0.15
CLN6-205ENST00000564846 KIAA1324LA8MWY0 1029 aaPredicted RBP16.01■□□□□ 0.15
CLN6-205ENST00000564846 FAM90A26D6RGX4 464 aa16.01■□□□□ 0.15
CLN6-205ENST00000564846 NDUFS7O75251 213 aa16.01■□□□□ 0.15
CLN6-205ENST00000564846 ATP6V1G1O75348 118 aa16.01■□□□□ 0.15
CLN6-205ENST00000564846 PPIAL4GP0DN37 164 aa16.01■□□□□ 0.15
CLN6-205ENST00000564846 GNB2P62879 340 aa16.01■□□□□ 0.15
CLN6-205ENST00000564846 OR4S2Q8NH73 311 aa16.01■□□□□ 0.15
CLN6-205ENST00000564846 OR9G1Q8NH87 305 aa16.01■□□□□ 0.15
CLN6-205ENST00000564846 STOML3Q8TAV4 291 aa16.01■□□□□ 0.15
CLN6-205ENST00000564846 SCARB1Q8WTV0 552 aa16.01■□□□□ 0.15
CLN6-205ENST00000564846 SESN1Q9Y6P5 492 aa16.01■□□□□ 0.15
CLN6-205ENST00000564846 ARID1AO14497 2285 aa16.01■□□□□ 0.15
CLN6-205ENST00000564846 ZNF462Q96JM2 2506 aa16.01■□□□□ 0.15
CLN6-205ENST00000564846 MARCH11A6NNE9 402 aa16■□□□□ 0.15
CLN6-205ENST00000564846 J3QR06 171 aa16■□□□□ 0.15
CLN6-205ENST00000564846 TOR1AO14656 332 aa16■□□□□ 0.15
CLN6-205ENST00000564846 ZNF833PQ6ZTB9 187 aa16■□□□□ 0.15
CLN6-205ENST00000564846 H2BFWTQ7Z2G1 175 aa16■□□□□ 0.15
CLN6-205ENST00000564846 LY6G5BQ8NDX9 201 aa16■□□□□ 0.15
CLN6-205ENST00000564846 IGFBPL1Q8WX77 278 aa16■□□□□ 0.15
CLN6-205ENST00000564846 R3HDM4Q96D70 268 aa16■□□□□ 0.15
CLN6-205ENST00000564846 PHYHIPLQ96FC7 376 aa16■□□□□ 0.15
CLN6-205ENST00000564846 TMEM133Q9H2Q1 129 aa16■□□□□ 0.15
CLN6-205ENST00000564846 hCG_1809904A0A1W2PP81 198 aa16■□□□□ 0.15
CLN6-205ENST00000564846 A0A1W2PPE2 198 aa16■□□□□ 0.15
CLN6-205ENST00000564846 A0A1W2PR64 198 aa16■□□□□ 0.15
CLN6-205ENST00000564846 A0A1W2PRV1 198 aa16■□□□□ 0.15
CLN6-205ENST00000564846 CHST1O43916 411 aa16■□□□□ 0.15
CLN6-205ENST00000564846 TPT1P13693 172 aaKnown RBP16■□□□□ 0.15
CLN6-205ENST00000564846 ARHGDIBP52566 201 aa16■□□□□ 0.15
CLN6-205ENST00000564846 RAB14P61106 215 aa16■□□□□ 0.15
CLN6-205ENST00000564846 FAM71F2Q6NXP2 309 aa16■□□□□ 0.15
CLN6-205ENST00000564846 ALKAL2Q6UX46 152 aa16■□□□□ 0.15
CLN6-205ENST00000564846 OR2C3Q8N628 320 aa16■□□□□ 0.15
CLN6-205ENST00000564846 ZNF383Q8NA42 475 aa16■□□□□ 0.15
CLN6-205ENST00000564846 OR10X1Q8NGY0 326 aa16■□□□□ 0.15
CLN6-205ENST00000564846 RAB40CQ96S21 281 aa16■□□□□ 0.15
CLN6-205ENST00000564846 GSX2Q9BZM3 304 aa16■□□□□ 0.15
CLN6-205ENST00000564846 CYTL1Q9NRR1 136 aa16■□□□□ 0.15
CLN6-205ENST00000564846 LYRM2Q9NU23 88 aaPredicted RBP16■□□□□ 0.15
CLN6-205ENST00000564846 USF3Q68DE3 2245 aa15.99■□□□□ 0.15
CLN6-205ENST00000564846 NXPH3O95157 252 aa15.99■□□□□ 0.15
CLN6-205ENST00000564846 LIPFP07098 398 aa15.99■□□□□ 0.15
CLN6-205ENST00000564846 MIDNQ504T8 468 aa15.99■□□□□ 0.15
CLN6-205ENST00000564846 ABHD12Q8N2K0 398 aa15.99■□□□□ 0.15
CLN6-205ENST00000564846 TNFRSF14Q92956 283 aa15.99■□□□□ 0.15
CLN6-205ENST00000564846 TMEM186Q96B77 213 aa15.99■□□□□ 0.15
CLN6-205ENST00000564846 SSBP3Q9BWW4 388 aaPredicted RBP15.99■□□□□ 0.15
CLN6-205ENST00000564846 SLC25A31Q9H0C2 315 aa15.99■□□□□ 0.15
CLN6-205ENST00000564846 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.99■□□□□ 0.15
CLN6-205ENST00000564846 ZNRD1Q9P1U0 126 aa15.99■□□□□ 0.15
CLN6-205ENST00000564846 YLPM1P49750 1951 aaKnown RBP15.99■□□□□ 0.15
CLN6-205ENST00000564846 FAM90A9PA6NNJ1 464 aa15.98■□□□□ 0.15
CLN6-205ENST00000564846 NQO2P16083 231 aa15.98■□□□□ 0.15
CLN6-205ENST00000564846 CAV2P51636 162 aa15.98■□□□□ 0.15
CLN6-205ENST00000564846 EIF5AP63241 154 aaKnown RBP15.98■□□□□ 0.15
CLN6-205ENST00000564846 CLLU1Q5K131 121 aa15.98■□□□□ 0.15
CLN6-205ENST00000564846 SLC7A5P1Q8MH63 180 aa15.98■□□□□ 0.15
CLN6-205ENST00000564846 FBXL17Q9UF56 701 aa15.98■□□□□ 0.15
CLN6-205ENST00000564846 SYNGR2O43760 224 aa15.98■□□□□ 0.15
CLN6-205ENST00000564846 CT45A6P0DMU7 189 aa15.98■□□□□ 0.15
CLN6-205ENST00000564846 CT45A5P0DMU8 189 aa15.98■□□□□ 0.15
CLN6-205ENST00000564846 CT45A7P0DMV0 189 aa15.98■□□□□ 0.15
CLN6-205ENST00000564846 ERVK-16P61578 105 aa15.98■□□□□ 0.15
CLN6-205ENST00000564846 SRSF1Q07955 248 aaKnown RBP eCLIP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms