RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 TSPAN15O95858 294 aa6.05□□□□□ -1.44
HERPUD1-209ENST00000564678 GYPEP15421 78 aa6.05□□□□□ -1.44
HERPUD1-209ENST00000564678 SNCAP37840 140 aa6.05□□□□□ -1.44
HERPUD1-209ENST00000564678 ZNF83P51522 516 aa6.05□□□□□ -1.44
HERPUD1-209ENST00000564678 AKR1C2P52895 323 aa6.05□□□□□ -1.44
HERPUD1-209ENST00000564678 PAX9P55771 341 aa6.05□□□□□ -1.44
HERPUD1-209ENST00000564678 STX12Q86Y82 276 aa6.05□□□□□ -1.44
HERPUD1-209ENST00000564678 FGFRL1Q8N441 504 aa6.05□□□□□ -1.44
HERPUD1-209ENST00000564678 OR5C1Q8NGR4 320 aa6.05□□□□□ -1.44
HERPUD1-209ENST00000564678 HIPK2Q9H2X6 1198 aa6.05□□□□□ -1.44
HERPUD1-209ENST00000564678 ELOVL5Q9NYP7 299 aa6.05□□□□□ -1.44
HERPUD1-209ENST00000564678 KCNS2Q9ULS6 477 aa6.05□□□□□ -1.44
HERPUD1-209ENST00000564678 FZR1Q9UM11 496 aa6.05□□□□□ -1.44
HERPUD1-209ENST00000564678 A0A0G2JRQ6 117 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 IGHV3-64DA0A0J9YX35 117 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 K7EM74 188 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 MGST3O14880 152 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 SYNGR2O43760 224 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 ZNF737O75373 536 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 TMEM50AO95807 157 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 LHBP01229 141 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 MUC1P15941 1255 aaPredicted RBP6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 PCP4P48539 62 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 CEBPDP49716 269 aaPredicted RBP6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 SULT1A1P50225 295 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 EIF4EBP1Q13541 118 aaPredicted RBP6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 PEA15Q15121 130 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 TMEM200BQ69YZ2 307 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 ATRAIDQ6UW56 229 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 ZNF66Q6ZN08 573 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 TMEM182Q6ZP80 229 aaPredicted RBP6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 MRGPRGQ86SM5 289 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 HSD17B11Q8NBQ5 300 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 BEND2Q8NDZ0 799 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 OR1L1Q8NH94 360 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 C2CD4CQ8TF44 421 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 MAGT1Q9H0U3 335 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 RAB9BQ9NP90 201 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 C19orf12Q9NSK7 152 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 MMP24Q9Y5R2 645 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 CHD3Q12873 2000 aaKnown RBP6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 A0A1B0GW64 132 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 A0A1W2PRX2 142 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 BTBD17A6NE02 478 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 K7N7A8 449 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 DNASE2O00115 360 aaPredicted RBP6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 TOX4O94842 621 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 IGKV1-5P01602 117 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 PRH1P02810 166 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 ADCYAP1P18509 176 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 ATP6V0CP27449 155 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 GLIPR1P48060 266 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 DYNLT3P51808 116 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 SRSF3P84103 164 aaKnown RBP6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 AKR1C1Q04828 323 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 MIDNQ504T8 468 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 LBHQ53QV2 105 aaPredicted RBP6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 HIST2H2BCQ6DN03 193 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 HIST2H2BDQ6DRA6 164 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 DPPA3Q6W0C5 159 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 Q6ZRM9 215 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 ODF3L1Q8IXM7 274 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 RPRMLQ8N4K4 120 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 GCSAMQ8N6F7 178 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 CD177Q8N6Q3 437 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 NUP37Q8NFH4 326 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 CD300LFQ8TDQ1 290 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 MRGPRDQ8TDS7 321 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 MEGF10Q96KG7 1140 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 OR2V2Q96R30 315 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 HSD17B10Q99714 261 aaKnown RBP6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 ATP5SQ99766 215 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 PBDC1Q9BVG4 233 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 OR2D2Q9H210 308 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 CACNG5Q9UF02 275 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 ZNF292O60281 2723 aa6.04□□□□□ -1.44
HERPUD1-209ENST00000564678 LAMA5O15230 3695 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 ZFHX4Q86UP3 3567 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 IGKV1D-17A0A075B6S4 117 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 A0A0G2JNJ9 132 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 LOC105371267A0A1B0GV96 52 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 C15orf65H3BRN8 121 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 ITGB1BP1O14713 200 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 IFNA5P01569 189 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 HOXB4P17483 251 aaPredicted RBP6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 OMGP23515 440 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 TDGF1P3P51864 188 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 ARHGDIBP52566 201 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 CLINT1Q14677 625 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 MSMPQ1L6U9 139 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 TEX38Q6PEX7 206 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 TMEM108Q6UXF1 575 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 LRP11Q86VZ4 500 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 DOLPP1Q86YN1 238 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 PUSL1Q8N0Z8 303 aaKnown RBP6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 OR52L2PQ8NGH6 319 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 OR13A1Q8NGR1 328 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 OR2G3Q8NGZ4 309 aa6.03□□□□□ -1.44
HERPUD1-209ENST00000564678 FAM222BQ8WU58 562 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms