RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 RPL23AP62750 156 aaKnown RBP6.16□□□□□ -1.42
MAP1LC3B-205ENST00000564638 EWSR1Q01844 656 aaKnown RBP eCLIP6.16□□□□□ -1.42
MAP1LC3B-205ENST00000564638 ID3Q02535 119 aa6.16□□□□□ -1.42
MAP1LC3B-205ENST00000564638 ZNF266Q14584 549 aa6.16□□□□□ -1.42
MAP1LC3B-205ENST00000564638 ADIPOQQ15848 244 aa6.16□□□□□ -1.42
MAP1LC3B-205ENST00000564638 SWI5Q1ZZU3 235 aa6.16□□□□□ -1.42
MAP1LC3B-205ENST00000564638 TMEM30BQ3MIR4 351 aa6.16□□□□□ -1.42
MAP1LC3B-205ENST00000564638 Q3ZCU0 254 aa6.16□□□□□ -1.42
MAP1LC3B-205ENST00000564638 SPRNQ5BIV9 151 aa6.16□□□□□ -1.42
MAP1LC3B-205ENST00000564638 STUMQ69YW2 141 aa6.16□□□□□ -1.42
MAP1LC3B-205ENST00000564638 UQCC3Q6UW78 93 aa6.16□□□□□ -1.42
MAP1LC3B-205ENST00000564638 IL34Q6ZMJ4 242 aa6.16□□□□□ -1.42
MAP1LC3B-205ENST00000564638 ZNF66Q6ZN08 573 aa6.16□□□□□ -1.42
MAP1LC3B-205ENST00000564638 DTX2Q86UW9 622 aa6.16□□□□□ -1.42
MAP1LC3B-205ENST00000564638 STX12Q86Y82 276 aa6.16□□□□□ -1.42
MAP1LC3B-205ENST00000564638 C1orf87Q8N0U7 546 aa6.16□□□□□ -1.42
MAP1LC3B-205ENST00000564638 OR1S2Q8NGQ3 325 aa6.16□□□□□ -1.42
MAP1LC3B-205ENST00000564638 GPR146Q96CH1 333 aa6.16□□□□□ -1.42
MAP1LC3B-205ENST00000564638 SDSLQ96GA7 329 aa6.16□□□□□ -1.42
MAP1LC3B-205ENST00000564638 RAB40CQ96S21 281 aa6.16□□□□□ -1.42
MAP1LC3B-205ENST00000564638 HSD17B10Q99714 261 aaKnown RBP6.16□□□□□ -1.42
MAP1LC3B-205ENST00000564638 MAGT1Q9H0U3 335 aa6.16□□□□□ -1.42
MAP1LC3B-205ENST00000564638 FAM234AQ9H0X4 552 aa6.16□□□□□ -1.42
MAP1LC3B-205ENST00000564638 ARV1Q9H2C2 271 aa6.16□□□□□ -1.42
MAP1LC3B-205ENST00000564638 ZNF665Q9H7R5 613 aa6.16□□□□□ -1.42
MAP1LC3B-205ENST00000564638 GCM1Q9NP62 436 aa6.16□□□□□ -1.42
MAP1LC3B-205ENST00000564638 DYNLRB1Q9NP97 96 aa6.16□□□□□ -1.42
MAP1LC3B-205ENST00000564638 FAM212BQ9NTI7 297 aaPredicted RBP6.16□□□□□ -1.42
MAP1LC3B-205ENST00000564638 CALYQ9NYX4 217 aa6.16□□□□□ -1.42
MAP1LC3B-205ENST00000564638 LPAR3Q9UBY5 353 aa6.16□□□□□ -1.42
MAP1LC3B-205ENST00000564638 NUP50Q9UKX7 468 aa6.16□□□□□ -1.42
MAP1LC3B-205ENST00000564638 PSG11Q9UQ72 335 aa6.16□□□□□ -1.42
MAP1LC3B-205ENST00000564638 CSPG4Q6UVK1 2322 aa6.16□□□□□ -1.42
MAP1LC3B-205ENST00000564638 TRGV10A0A0A0MS01 117 aa6.15□□□□□ -1.42
MAP1LC3B-205ENST00000564638 IGHV3-43A0A0B4J1X8 118 aa6.15□□□□□ -1.42
MAP1LC3B-205ENST00000564638 IGSF23A1L1A6 192 aa6.15□□□□□ -1.42
MAP1LC3B-205ENST00000564638 C17orf100A8MU93 164 aa6.15□□□□□ -1.42
MAP1LC3B-205ENST00000564638 B9A039 149 aa6.15□□□□□ -1.42
MAP1LC3B-205ENST00000564638 FAM90A26D6RGX4 464 aa6.15□□□□□ -1.42
MAP1LC3B-205ENST00000564638 LGALS8O00214 317 aa6.15□□□□□ -1.42
MAP1LC3B-205ENST00000564638 F2RL2O00254 374 aa6.15□□□□□ -1.42
MAP1LC3B-205ENST00000564638 ST8SIA5O15466 376 aa6.15□□□□□ -1.42
MAP1LC3B-205ENST00000564638 FBXO24O75426 580 aa6.15□□□□□ -1.42
MAP1LC3B-205ENST00000564638 NXPH3O95157 252 aa6.15□□□□□ -1.42
MAP1LC3B-205ENST00000564638 CYB5R3P00387 301 aaPredicted RBP6.15□□□□□ -1.42
MAP1LC3B-205ENST00000564638 IGKV1-39P01597 117 aa6.15□□□□□ -1.42
MAP1LC3B-205ENST00000564638 IGKV1-5P01602 117 aa6.15□□□□□ -1.42
MAP1LC3B-205ENST00000564638 IGKV1D-39P04432 117 aa6.15□□□□□ -1.42
MAP1LC3B-205ENST00000564638 SEC11BP0C7V7 166 aa6.15□□□□□ -1.42
MAP1LC3B-205ENST00000564638 IGHV3-43DP0DP04 118 aa6.15□□□□□ -1.42
MAP1LC3B-205ENST00000564638 SULT1A2P50226 295 aa6.15□□□□□ -1.42
MAP1LC3B-205ENST00000564638 RAB7AP51149 207 aa6.15□□□□□ -1.42
MAP1LC3B-205ENST00000564638 CR1LQ2VPA4 569 aa6.15□□□□□ -1.42
MAP1LC3B-205ENST00000564638 CXorf66Q5JRM2 361 aaPredicted RBP6.15□□□□□ -1.42
MAP1LC3B-205ENST00000564638 FAM209AQ5JX71 171 aa6.15□□□□□ -1.42
MAP1LC3B-205ENST00000564638 TEX36Q5VZQ5 186 aa6.15□□□□□ -1.42
MAP1LC3B-205ENST00000564638 C11orf71Q6IPW1 123 aa6.15□□□□□ -1.42
MAP1LC3B-205ENST00000564638 TMEM252Q8N6L7 170 aa6.15□□□□□ -1.42
MAP1LC3B-205ENST00000564638 RFESDQ8TAC1 157 aa6.15□□□□□ -1.42
MAP1LC3B-205ENST00000564638 MARC2Q969Z3 335 aa6.15□□□□□ -1.42
MAP1LC3B-205ENST00000564638 MBD6Q96DN6 1003 aa6.15□□□□□ -1.42
MAP1LC3B-205ENST00000564638 LINC00052Q96N35 136 aa6.15□□□□□ -1.42
MAP1LC3B-205ENST00000564638 GAFA1Q96PS6 74 aa6.15□□□□□ -1.42
MAP1LC3B-205ENST00000564638 GINS3Q9BRX5 216 aa6.15□□□□□ -1.42
MAP1LC3B-205ENST00000564638 DCTN5Q9BTE1 182 aa6.15□□□□□ -1.42
MAP1LC3B-205ENST00000564638 MMP26Q9NRE1 261 aa6.15□□□□□ -1.42
MAP1LC3B-205ENST00000564638 COA4Q9NYJ1 87 aa6.15□□□□□ -1.42
MAP1LC3B-205ENST00000564638 RNF150Q9ULK6 438 aa6.15□□□□□ -1.42
MAP1LC3B-205ENST00000564638 MMP24Q9Y5R2 645 aa6.15□□□□□ -1.42
MAP1LC3B-205ENST00000564638 FLNAP21333 2647 aaKnown RBP6.14□□□□□ -1.43
MAP1LC3B-205ENST00000564638 TRAV38-1A0A0B4J264 116 aa6.14□□□□□ -1.43
MAP1LC3B-205ENST00000564638 A0A0G2JRQ6 117 aa6.14□□□□□ -1.43
MAP1LC3B-205ENST00000564638 ZNF729A6NN14 1252 aaPredicted RBP6.14□□□□□ -1.43
MAP1LC3B-205ENST00000564638 OVOL3O00110 214 aa6.14□□□□□ -1.43
MAP1LC3B-205ENST00000564638 ITGB1BP1O14713 200 aa6.14□□□□□ -1.43
MAP1LC3B-205ENST00000564638 SIGLEC5O15389 551 aa6.14□□□□□ -1.43
MAP1LC3B-205ENST00000564638 SYNGR2O43760 224 aa6.14□□□□□ -1.43
MAP1LC3B-205ENST00000564638 YPEL1O60688 119 aa6.14□□□□□ -1.43
MAP1LC3B-205ENST00000564638 NDUFS7O75251 213 aa6.14□□□□□ -1.43
MAP1LC3B-205ENST00000564638 DFFBO76075 338 aa6.14□□□□□ -1.43
MAP1LC3B-205ENST00000564638 FAM157CP0CG43 387 aa6.14□□□□□ -1.43
MAP1LC3B-205ENST00000564638 KIR2DS2P43631 304 aa6.14□□□□□ -1.43
MAP1LC3B-205ENST00000564638 RAB5CP51148 216 aa6.14□□□□□ -1.43
MAP1LC3B-205ENST00000564638 CCL8P80075 99 aa6.14□□□□□ -1.43
MAP1LC3B-205ENST00000564638 NHLH2Q02577 135 aa6.14□□□□□ -1.43
MAP1LC3B-205ENST00000564638 ZNF816Q0VGE8 651 aaPredicted RBP6.14□□□□□ -1.43
MAP1LC3B-205ENST00000564638 EIF4EBP1Q13541 118 aaPredicted RBP6.14□□□□□ -1.43
MAP1LC3B-205ENST00000564638 CLINT1Q14677 625 aa6.14□□□□□ -1.43
MAP1LC3B-205ENST00000564638 LTC4SQ16873 150 aa6.14□□□□□ -1.43
MAP1LC3B-205ENST00000564638 MST1LQ2TV78 715 aa6.14□□□□□ -1.43
MAP1LC3B-205ENST00000564638 ZNF585BQ52M93 769 aa6.14□□□□□ -1.43
MAP1LC3B-205ENST00000564638 OR2B11Q5JQS5 317 aa6.14□□□□□ -1.43
MAP1LC3B-205ENST00000564638 Q5PR19 223 aa6.14□□□□□ -1.43
MAP1LC3B-205ENST00000564638 FAM201AQ5SY85 155 aa6.14□□□□□ -1.43
MAP1LC3B-205ENST00000564638 PXDC1Q5TGL8 231 aa6.14□□□□□ -1.43
MAP1LC3B-205ENST00000564638 BTNL3Q6UXE8 466 aa6.14□□□□□ -1.43
MAP1LC3B-205ENST00000564638 ZNF788Q6ZQV5 615 aa6.14□□□□□ -1.43
MAP1LC3B-205ENST00000564638 Q6ZRG5 221 aa6.14□□□□□ -1.43
MAP1LC3B-205ENST00000564638 SPAG16Q8N0X2 631 aa6.14□□□□□ -1.43
MAP1LC3B-205ENST00000564638 STPG2Q8N412 459 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms