RNA–Protein interactions for RNA: ENST00000564399.1

VPS4A-203, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 5

Gene VPS4A, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-203ENST00000564399 GNGT1P63211 74 aa5.45□□□□□ -1.54
VPS4A-203ENST00000564399 ZNF45Q02386 682 aa5.45□□□□□ -1.54
VPS4A-203ENST00000564399 RBMS2Q15434 407 aaKnown RBP5.45□□□□□ -1.54
VPS4A-203ENST00000564399 HMGN3Q15651 99 aa5.45□□□□□ -1.54
VPS4A-203ENST00000564399 SLC25A30Q5SVS4 291 aa5.45□□□□□ -1.54
VPS4A-203ENST00000564399 SIGIRRQ6IA17 410 aa5.45□□□□□ -1.54
VPS4A-203ENST00000564399 FAM223AQ8IWN6 122 aa5.45□□□□□ -1.54
VPS4A-203ENST00000564399 STPG3Q8N7X2 389 aa5.45□□□□□ -1.54
VPS4A-203ENST00000564399 ZNF383Q8NA42 475 aa5.45□□□□□ -1.54
VPS4A-203ENST00000564399 ADAD2Q8NCV1 583 aaKnown RBP5.45□□□□□ -1.54
VPS4A-203ENST00000564399 KCNG3Q8TAE7 436 aa5.45□□□□□ -1.54
VPS4A-203ENST00000564399 EDARADDQ8WWZ3 215 aa5.45□□□□□ -1.54
VPS4A-203ENST00000564399 CACNG8Q8WXS5 425 aa5.45□□□□□ -1.54
VPS4A-203ENST00000564399 RNF183Q96D59 192 aa5.45□□□□□ -1.54
VPS4A-203ENST00000564399 Q96M66 194 aa5.45□□□□□ -1.54
VPS4A-203ENST00000564399 OR14A2Q96R54 314 aa5.45□□□□□ -1.54
VPS4A-203ENST00000564399 SULT4A1Q9BR01 284 aa5.45□□□□□ -1.54
VPS4A-203ENST00000564399 C11orf54Q9H0W9 315 aaPredicted RBP5.45□□□□□ -1.54
VPS4A-203ENST00000564399 SLC35D1Q9NTN3 355 aa5.45□□□□□ -1.54
VPS4A-203ENST00000564399 CKLFQ9UBR5 152 aa5.45□□□□□ -1.54
VPS4A-203ENST00000564399 AASSQ9UDR5 926 aa5.45□□□□□ -1.54
VPS4A-203ENST00000564399 ZNF230Q9UIE0 474 aaPredicted RBP5.45□□□□□ -1.54
VPS4A-203ENST00000564399 POMPQ9Y244 141 aa5.45□□□□□ -1.54
VPS4A-203ENST00000564399 EXOSC1Q9Y3B2 195 aaKnown RBP5.45□□□□□ -1.54
VPS4A-203ENST00000564399 UBR4Q5T4S7 5183 aa5.45□□□□□ -1.54
VPS4A-203ENST00000564399 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.44□□□□□ -1.54
VPS4A-203ENST00000564399 M0R1X1 148 aa5.44□□□□□ -1.54
VPS4A-203ENST00000564399 LGALS9O00182 355 aa5.44□□□□□ -1.54
VPS4A-203ENST00000564399 ITGB1BP1O14713 200 aa5.44□□□□□ -1.54
VPS4A-203ENST00000564399 GYG2O15488 501 aa5.44□□□□□ -1.54
VPS4A-203ENST00000564399 GGCTO75223 188 aaKnown RBP5.44□□□□□ -1.54
VPS4A-203ENST00000564399 IGLV2-23P01705 113 aa5.44□□□□□ -1.54
VPS4A-203ENST00000564399 MAP2K4P45985 399 aa5.44□□□□□ -1.54
VPS4A-203ENST00000564399 NANOS2P60321 138 aaKnown RBP5.44□□□□□ -1.54
VPS4A-203ENST00000564399 CBX3Q13185 183 aa5.44□□□□□ -1.54
VPS4A-203ENST00000564399 TNXAQ16473 311 aa5.44□□□□□ -1.54
VPS4A-203ENST00000564399 XAF1Q6GPH4 301 aa5.44□□□□□ -1.54
VPS4A-203ENST00000564399 RPL22L1Q6P5R6 122 aaKnown RBP5.44□□□□□ -1.54
VPS4A-203ENST00000564399 RBPMS2Q6ZRY4 209 aaKnown RBP5.44□□□□□ -1.54
VPS4A-203ENST00000564399 SLC38A6Q8IZM9 456 aa5.44□□□□□ -1.54
VPS4A-203ENST00000564399 UXS1Q8NBZ7 420 aa5.44□□□□□ -1.54
VPS4A-203ENST00000564399 OR1L6Q8NGR2 347 aa5.44□□□□□ -1.54
VPS4A-203ENST00000564399 OR13C5Q8NGS8 318 aa5.44□□□□□ -1.54
VPS4A-203ENST00000564399 C2CD4CQ8TF44 421 aa5.44□□□□□ -1.54
VPS4A-203ENST00000564399 FAM46BQ96A09 425 aa5.44□□□□□ -1.54
VPS4A-203ENST00000564399 HARBI1Q96MB7 349 aa5.44□□□□□ -1.54
VPS4A-203ENST00000564399 AGMATQ9BSE5 352 aa5.44□□□□□ -1.54
VPS4A-203ENST00000564399 FAAP24Q9BTP7 215 aa5.44□□□□□ -1.54
VPS4A-203ENST00000564399 AMBNQ9NP70 447 aa5.44□□□□□ -1.54
VPS4A-203ENST00000564399 MLXQ9UH92 298 aa5.44□□□□□ -1.54
VPS4A-203ENST00000564399 TRAV8-7A0A075B6U6 113 aa5.43□□□□□ -1.54
VPS4A-203ENST00000564399 SAC3D1A6NKF1 404 aa5.43□□□□□ -1.54
VPS4A-203ENST00000564399 SHOXO15266 292 aa5.43□□□□□ -1.54
VPS4A-203ENST00000564399 PROP1O75360 226 aa5.43□□□□□ -1.54
VPS4A-203ENST00000564399 OR2J3O76001 311 aa5.43□□□□□ -1.54
VPS4A-203ENST00000564399 CRYGBP07316 175 aa5.43□□□□□ -1.54
VPS4A-203ENST00000564399 CTRB1P17538 263 aa5.43□□□□□ -1.54
VPS4A-203ENST00000564399 IGFBP3P17936 291 aaPredicted RBP5.43□□□□□ -1.54
VPS4A-203ENST00000564399 RPL35AP18077 110 aaKnown RBP5.43□□□□□ -1.54
VPS4A-203ENST00000564399 ZBTB25P24278 435 aa5.43□□□□□ -1.54
VPS4A-203ENST00000564399 ARL3P36405 182 aa5.43□□□□□ -1.54
VPS4A-203ENST00000564399 MED22Q15528 200 aa5.43□□□□□ -1.54
VPS4A-203ENST00000564399 C15orf32Q32M92 178 aa5.43□□□□□ -1.54
VPS4A-203ENST00000564399 FAM106AQ4KMX7 169 aa5.43□□□□□ -1.54
VPS4A-203ENST00000564399 CCDC58Q4VC31 144 aa5.43□□□□□ -1.54
VPS4A-203ENST00000564399 FAM209BQ5JX69 171 aa5.43□□□□□ -1.54
VPS4A-203ENST00000564399 CTRB2Q6GPI1 263 aa5.43□□□□□ -1.54
VPS4A-203ENST00000564399 BTNL8Q6UX41 500 aa5.43□□□□□ -1.54
VPS4A-203ENST00000564399 MOB1BQ7L9L4 216 aa5.43□□□□□ -1.54
VPS4A-203ENST00000564399 C6orf201Q7Z4U5 140 aa5.43□□□□□ -1.54
VPS4A-203ENST00000564399 SVOPQ8N4V2 548 aa5.43□□□□□ -1.54
VPS4A-203ENST00000564399 NECAP1Q8NC96 275 aa5.43□□□□□ -1.54
VPS4A-203ENST00000564399 C11orf45Q8TAV5 145 aa5.43□□□□□ -1.54
VPS4A-203ENST00000564399 FBLIM1Q8WUP2 373 aa5.43□□□□□ -1.54
VPS4A-203ENST00000564399 SRSF12Q8WXF0 261 aaKnown RBP5.43□□□□□ -1.54
VPS4A-203ENST00000564399 ACOT12Q8WYK0 555 aa5.43□□□□□ -1.54
VPS4A-203ENST00000564399 KRTAP4-5Q9BYR2 181 aa5.43□□□□□ -1.54
VPS4A-203ENST00000564399 MFFQ9GZY8 342 aa5.43□□□□□ -1.54
VPS4A-203ENST00000564399 OR1A1Q9P1Q5 309 aa5.43□□□□□ -1.54
VPS4A-203ENST00000564399 UBQLN2Q9UHD9 624 aa5.43□□□□□ -1.54
VPS4A-203ENST00000564399 OAZ3Q9UMX2 235 aa5.43□□□□□ -1.54
VPS4A-203ENST00000564399 AP4S1Q9Y587 144 aa5.43□□□□□ -1.54
VPS4A-203ENST00000564399 ORC6Q9Y5N6 252 aa5.43□□□□□ -1.54
VPS4A-203ENST00000564399 TRBV9A0A0B4J1U6 114 aa5.42□□□□□ -1.54
VPS4A-203ENST00000564399 TRAV25A0A0B4J276 109 aa5.42□□□□□ -1.54
VPS4A-203ENST00000564399 KIR2DL5BA0A0G2JN68 375 aa5.42□□□□□ -1.54
VPS4A-203ENST00000564399 KIR2DL5BA0A0G2JPC4 375 aa5.42□□□□□ -1.54
VPS4A-203ENST00000564399 A0A1B0GVY2 172 aa5.42□□□□□ -1.54
VPS4A-203ENST00000564399 A0A1W2PPK0 400 aa5.42□□□□□ -1.54
VPS4A-203ENST00000564399 TMEM213A2RRL7 107 aa5.42□□□□□ -1.54
VPS4A-203ENST00000564399 PRSS29PA6NIE9 313 aa5.42□□□□□ -1.54
VPS4A-203ENST00000564399 IGLL5B9A064 214 aa5.42□□□□□ -1.54
VPS4A-203ENST00000564399 ACTL6BO94805 426 aa5.42□□□□□ -1.54
VPS4A-203ENST00000564399 IGHV3-23P01764 117 aa5.42□□□□□ -1.54
VPS4A-203ENST00000564399 FCGR1AP12314 374 aa5.42□□□□□ -1.54
VPS4A-203ENST00000564399 GYS2P54840 703 aa5.42□□□□□ -1.54
VPS4A-203ENST00000564399 TCTAP57738 103 aa5.42□□□□□ -1.54
VPS4A-203ENST00000564399 ZIK1Q3SY52 487 aaPredicted RBP5.42□□□□□ -1.54
VPS4A-203ENST00000564399 VMA21Q3ZAQ7 101 aa5.42□□□□□ -1.54
VPS4A-203ENST00000564399 Q499Y3 187 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms