RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 SRSF4Q08170 494 aaKnown RBP17.9■□□□□ 0.46
LINC01960-201ENST00000563759 ZNF816Q0VGE8 651 aaPredicted RBP17.9■□□□□ 0.46
LINC01960-201ENST00000563759 LRRC37A5PQ49AS3 106 aa17.9■□□□□ 0.46
LINC01960-201ENST00000563759 NCR3LG1Q68D85 454 aa17.9■□□□□ 0.46
LINC01960-201ENST00000563759 C2orf50Q96LR7 162 aa17.9■□□□□ 0.46
LINC01960-201ENST00000563759 MMP26Q9NRE1 261 aa17.9■□□□□ 0.46
LINC01960-201ENST00000563759 GSKIPQ9P0R6 139 aa17.9■□□□□ 0.46
LINC01960-201ENST00000563759 VDAC1P21796 283 aa17.89■□□□□ 0.45
LINC01960-201ENST00000563759 LPAR6P43657 344 aa17.89■□□□□ 0.45
LINC01960-201ENST00000563759 THBS3P49746 956 aa17.89■□□□□ 0.45
LINC01960-201ENST00000563759 C1orf122Q6ZSJ8 110 aa17.89■□□□□ 0.45
LINC01960-201ENST00000563759 ZNF833PQ6ZTB9 187 aa17.89■□□□□ 0.45
LINC01960-201ENST00000563759 PNKDQ8N490 385 aa17.89■□□□□ 0.45
LINC01960-201ENST00000563759 CD300LFQ8TDQ1 290 aa17.89■□□□□ 0.45
LINC01960-201ENST00000563759 TMEM186Q96B77 213 aa17.89■□□□□ 0.45
LINC01960-201ENST00000563759 ADTRPQ96IZ2 230 aa17.89■□□□□ 0.45
LINC01960-201ENST00000563759 FAM212BQ9NTI7 297 aaPredicted RBP17.89■□□□□ 0.45
LINC01960-201ENST00000563759 FCGR3BO75015 233 aa17.88■□□□□ 0.45
LINC01960-201ENST00000563759 HLA-DRB5Q30154 266 aa17.88■□□□□ 0.45
LINC01960-201ENST00000563759 Q5BKY6 102 aa17.88■□□□□ 0.45
LINC01960-201ENST00000563759 PPP1R1CQ8WVI7 109 aa17.88■□□□□ 0.45
LINC01960-201ENST00000563759 FAM210AQ96ND0 272 aa17.88■□□□□ 0.45
LINC01960-201ENST00000563759 IGKV1-39P01597 117 aa17.88■□□□□ 0.45
LINC01960-201ENST00000563759 IGKV1D-39P04432 117 aa17.88■□□□□ 0.45
LINC01960-201ENST00000563759 USF1P22415 310 aaPredicted RBP17.88■□□□□ 0.45
LINC01960-201ENST00000563759 PRTN3P24158 256 aa17.88■□□□□ 0.45
LINC01960-201ENST00000563759 KIR2DS2P43631 304 aa17.88■□□□□ 0.45
LINC01960-201ENST00000563759 GZMKP49863 264 aa17.88■□□□□ 0.45
LINC01960-201ENST00000563759 FGL1Q08830 312 aa17.88■□□□□ 0.45
LINC01960-201ENST00000563759 FAM71F2Q6NXP2 309 aa17.88■□□□□ 0.45
LINC01960-201ENST00000563759 VMO1Q7Z5L0 202 aa17.88■□□□□ 0.45
LINC01960-201ENST00000563759 BEND2Q8NDZ0 799 aa17.88■□□□□ 0.45
LINC01960-201ENST00000563759 HYLS1Q96M11 299 aa17.88■□□□□ 0.45
LINC01960-201ENST00000563759 G3V3Q6 166 aa17.87■□□□□ 0.45
LINC01960-201ENST00000563759 S1PR2O95136 353 aa17.87■□□□□ 0.45
LINC01960-201ENST00000563759 IGLV1-47P01700 117 aa17.87■□□□□ 0.45
LINC01960-201ENST00000563759 REG1BP48304 166 aa17.87■□□□□ 0.45
LINC01960-201ENST00000563759 BRWD1-AS2P59051 145 aa17.87■□□□□ 0.45
LINC01960-201ENST00000563759 Q5PR19 223 aa17.87■□□□□ 0.45
LINC01960-201ENST00000563759 MBD6Q96DN6 1003 aa17.87■□□□□ 0.45
LINC01960-201ENST00000563759 SPIN2AQ99865 258 aa17.87■□□□□ 0.45
LINC01960-201ENST00000563759 SPIN2BQ9BPZ2 258 aa17.87■□□□□ 0.45
LINC01960-201ENST00000563759 PCGF1Q9BSM1 259 aa17.87■□□□□ 0.45
LINC01960-201ENST00000563759 HEXA-AS1Q9H8Q6 139 aa17.87■□□□□ 0.45
LINC01960-201ENST00000563759 POLR3KQ9Y2Y1 108 aaPredicted RBP17.87■□□□□ 0.45
LINC01960-201ENST00000563759 AMMECR1Q9Y4X0 333 aaPredicted RBP17.87■□□□□ 0.45
LINC01960-201ENST00000563759 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.87■□□□□ 0.45
LINC01960-201ENST00000563759 ZNF137PP52743 207 aa17.86■□□□□ 0.45
LINC01960-201ENST00000563759 NMSQ5H8A3 153 aa17.86■□□□□ 0.45
LINC01960-201ENST00000563759 THOC7Q6I9Y2 204 aaKnown RBP17.86■□□□□ 0.45
LINC01960-201ENST00000563759 ZNF383Q8NA42 475 aa17.86■□□□□ 0.45
LINC01960-201ENST00000563759 DDB2Q92466 427 aa17.86■□□□□ 0.45
LINC01960-201ENST00000563759 RRNAD1Q96FB5 475 aaKnown RBP17.86■□□□□ 0.45
LINC01960-201ENST00000563759 MRPL20Q9BYC9 149 aaKnown RBP17.86■□□□□ 0.45
LINC01960-201ENST00000563759 UNC79Q9P2D8 2635 aa17.86■□□□□ 0.45
LINC01960-201ENST00000563759 ATG12O94817 140 aa17.86■□□□□ 0.45
LINC01960-201ENST00000563759 EPHA1P21709 976 aa17.86■□□□□ 0.45
LINC01960-201ENST00000563759 DVL1P1P54792 670 aaPredicted RBP17.86■□□□□ 0.45
LINC01960-201ENST00000563759 KLRD1Q13241 179 aa17.86■□□□□ 0.45
LINC01960-201ENST00000563759 ZBTB8BQ8NAP8 495 aaPredicted RBP17.86■□□□□ 0.45
LINC01960-201ENST00000563759 OR4S2Q8NH73 311 aa17.86■□□□□ 0.45
LINC01960-201ENST00000563759 SIRPDQ9H106 197 aa17.86■□□□□ 0.45
LINC01960-201ENST00000563759 RBFOX2O43251 390 aaKnown RBP eCLIP17.85■□□□□ 0.45
LINC01960-201ENST00000563759 TOX4O94842 621 aa17.85■□□□□ 0.45
LINC01960-201ENST00000563759 ARG1P05089 322 aa17.85■□□□□ 0.45
LINC01960-201ENST00000563759 CT45A6P0DMU7 189 aa17.85■□□□□ 0.45
LINC01960-201ENST00000563759 CT45A5P0DMU8 189 aa17.85■□□□□ 0.45
LINC01960-201ENST00000563759 CT45A7P0DMV0 189 aa17.85■□□□□ 0.45
LINC01960-201ENST00000563759 TGIF2LXQ8IUE1 241 aa17.85■□□□□ 0.45
LINC01960-201ENST00000563759 OR11H4Q8NGC9 324 aa17.85■□□□□ 0.45
LINC01960-201ENST00000563759 UNKLQ9H9P5 680 aaKnown RBP17.85■□□□□ 0.45
LINC01960-201ENST00000563759 BUB1B-PAK6H3BSN5 160 aa17.84■□□□□ 0.45
LINC01960-201ENST00000563759 SCGB1D2O95969 90 aa17.84■□□□□ 0.45
LINC01960-201ENST00000563759 KRASP01116 189 aa17.84■□□□□ 0.45
LINC01960-201ENST00000563759 IGKV1-5P01602 117 aa17.84■□□□□ 0.45
LINC01960-201ENST00000563759 S100A10P60903 97 aa17.84■□□□□ 0.45
LINC01960-201ENST00000563759 DIAPH2-AS1Q14236 149 aa17.84■□□□□ 0.45
LINC01960-201ENST00000563759 FAM219AQ8IW50 185 aa17.84■□□□□ 0.45
LINC01960-201ENST00000563759 OR4P4Q8NGL7 312 aa17.84■□□□□ 0.45
LINC01960-201ENST00000563759 GRPEL2Q8TAA5 225 aa17.84■□□□□ 0.45
LINC01960-201ENST00000563759 LSM10Q969L4 123 aaKnown RBP17.84■□□□□ 0.45
LINC01960-201ENST00000563759 ST6GALNAC6Q969X2 333 aa17.84■□□□□ 0.45
LINC01960-201ENST00000563759 FXYD6-FXYD2A0A087WZ82 144 aa17.84■□□□□ 0.45
LINC01960-201ENST00000563759 HPRT1P00492 218 aa17.84■□□□□ 0.45
LINC01960-201ENST00000563759 PSMB6P28072 239 aa17.84■□□□□ 0.45
LINC01960-201ENST00000563759 G6PCP35575 357 aa17.84■□□□□ 0.45
LINC01960-201ENST00000563759 RTL8BQ17RB0 113 aa17.84■□□□□ 0.45
LINC01960-201ENST00000563759 OR11H6Q8NGC7 330 aa17.84■□□□□ 0.45
LINC01960-201ENST00000563759 PLEKHA2Q9HB19 425 aa17.84■□□□□ 0.45
LINC01960-201ENST00000563759 CR1P17927 2039 aa17.83■□□□□ 0.45
LINC01960-201ENST00000563759 HECTD1Q9ULT8 2610 aa17.83■□□□□ 0.45
LINC01960-201ENST00000563759 TRAV14DV4A0A0A6YYC5 116 aa17.83■□□□□ 0.44
LINC01960-201ENST00000563759 MPC2O95563 127 aa17.83■□□□□ 0.44
LINC01960-201ENST00000563759 CRYZL1O95825 349 aa17.83■□□□□ 0.44
LINC01960-201ENST00000563759 APOA2P02652 100 aa17.83■□□□□ 0.44
LINC01960-201ENST00000563759 PET100P0DJ07 73 aa17.83■□□□□ 0.44
LINC01960-201ENST00000563759 PDZD9Q8IXQ8 264 aa17.83■□□□□ 0.44
LINC01960-201ENST00000563759 SLC35D1Q9NTN3 355 aa17.83■□□□□ 0.44
LINC01960-201ENST00000563759 INSIG2Q9Y5U4 225 aa17.83■□□□□ 0.44
LINC01960-201ENST00000563759 A0A0G2JRQ6 117 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms