RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 PSMG3Q9BT73 122 aaPredicted RBP10.01□□□□□ -0.81
ABCA3-203ENST00000563623 LRP5LA4QPB2 252 aa10□□□□□ -0.81
ABCA3-203ENST00000563623 IFNL4K9M1U5 179 aa10□□□□□ -0.81
ABCA3-203ENST00000563623 OR2H2O95918 312 aa10□□□□□ -0.81
ABCA3-203ENST00000563623 GABRA2P47869 451 aa10□□□□□ -0.81
ABCA3-203ENST00000563623 RND2P52198 227 aa10□□□□□ -0.81
ABCA3-203ENST00000563623 KCNIP4Q6PIL6 250 aa10□□□□□ -0.81
ABCA3-203ENST00000563623 ZNF295-AS1Q8N0V1 137 aa10□□□□□ -0.81
ABCA3-203ENST00000563623 ZDHHC16Q969W1 377 aa10□□□□□ -0.81
ABCA3-203ENST00000563623 TCFL5Q9UL49 500 aa10□□□□□ -0.81
ABCA3-203ENST00000563623 C1QTNF9BB2RNN3 333 aa10□□□□□ -0.81
ABCA3-203ENST00000563623 ZG16O60844 167 aa10□□□□□ -0.81
ABCA3-203ENST00000563623 IGHV3-13P01766 116 aa10□□□□□ -0.81
ABCA3-203ENST00000563623 IGHV3-7P01780 117 aa10□□□□□ -0.81
ABCA3-203ENST00000563623 TFF1P04155 84 aa10□□□□□ -0.81
ABCA3-203ENST00000563623 GZMHP20718 246 aa10□□□□□ -0.81
ABCA3-203ENST00000563623 Q0VFX4 171 aa10□□□□□ -0.81
ABCA3-203ENST00000563623 CYP2G1PQ6ZSU1 146 aa10□□□□□ -0.81
ABCA3-203ENST00000563623 H2BFWTQ7Z2G1 175 aa10□□□□□ -0.81
ABCA3-203ENST00000563623 OR1L1Q8NH94 360 aa10□□□□□ -0.81
ABCA3-203ENST00000563623 OR5P3Q8WZ94 311 aa10□□□□□ -0.81
ABCA3-203ENST00000563623 R3HDM4Q96D70 268 aa10□□□□□ -0.81
ABCA3-203ENST00000563623 NEIL1Q96FI4 390 aaPredicted RBP10□□□□□ -0.81
ABCA3-203ENST00000563623 OBP2BQ9NPH6 170 aa10□□□□□ -0.81
ABCA3-203ENST00000563623 FOXJ2Q9P0K8 574 aa10□□□□□ -0.81
ABCA3-203ENST00000563623 CEP192Q8TEP8 1941 aa10□□□□□ -0.81
ABCA3-203ENST00000563623 RAMP3O60896 148 aa10□□□□□ -0.81
ABCA3-203ENST00000563623 SERPINA7P05543 415 aa10□□□□□ -0.81
ABCA3-203ENST00000563623 GZMBP10144 247 aa10□□□□□ -0.81
ABCA3-203ENST00000563623 ARR3P36575 388 aa10□□□□□ -0.81
ABCA3-203ENST00000563623 PPP1R32Q7Z5V6 425 aa10□□□□□ -0.81
ABCA3-203ENST00000563623 SAXO1Q8IYX7 474 aa10□□□□□ -0.81
ABCA3-203ENST00000563623 OR52L2PQ8NGH6 319 aa10□□□□□ -0.81
ABCA3-203ENST00000563623 OR51G1Q8NGK1 321 aa10□□□□□ -0.81
ABCA3-203ENST00000563623 CTXND1A0A1B0GTU2 59 aa9.99□□□□□ -0.81
ABCA3-203ENST00000563623 RNF212BA8MTL3 300 aa9.99□□□□□ -0.81
ABCA3-203ENST00000563623 C11orf94C9JXX5 98 aa9.99□□□□□ -0.81
ABCA3-203ENST00000563623 GALR2O43603 387 aaPredicted RBP9.99□□□□□ -0.81
ABCA3-203ENST00000563623 MT-CO3P00414 261 aa9.99□□□□□ -0.81
ABCA3-203ENST00000563623 MPLP40238 635 aa9.99□□□□□ -0.81
ABCA3-203ENST00000563623 HOXA4Q00056 320 aaPredicted RBP9.99□□□□□ -0.81
ABCA3-203ENST00000563623 ZFP36L1Q07352 338 aaKnown RBP9.99□□□□□ -0.81
ABCA3-203ENST00000563623 JOSD1Q15040 202 aaPredicted RBP9.99□□□□□ -0.81
ABCA3-203ENST00000563623 PRSS8Q16651 343 aa9.99□□□□□ -0.81
ABCA3-203ENST00000563623 DCAF12Q5T6F0 453 aa9.99□□□□□ -0.81
ABCA3-203ENST00000563623 RNASE8Q8TDE3 154 aaKnown RBP9.99□□□□□ -0.81
ABCA3-203ENST00000563623 DIRC2Q96SL1 478 aa9.99□□□□□ -0.81
ABCA3-203ENST00000563623 RTL8AQ9BWD3 113 aa9.99□□□□□ -0.81
ABCA3-203ENST00000563623 PATZ1Q9HBE1 687 aaKnown RBP9.99□□□□□ -0.81
ABCA3-203ENST00000563623 CDH20Q9HBT6 801 aa9.99□□□□□ -0.81
ABCA3-203ENST00000563623 CELSR3Q9NYQ7 3312 aa9.99□□□□□ -0.81
ABCA3-203ENST00000563623 PGPEP1LA6NFU8 196 aa9.99□□□□□ -0.81
ABCA3-203ENST00000563623 SH2D1BO14796 132 aa9.99□□□□□ -0.81
ABCA3-203ENST00000563623 HRASP01112 189 aa9.99□□□□□ -0.81
ABCA3-203ENST00000563623 LINC00614P0C842 121 aa9.99□□□□□ -0.81
ABCA3-203ENST00000563623 SLC25A6P12236 298 aa9.99□□□□□ -0.81
ABCA3-203ENST00000563623 TGFBR3Q03167 851 aa9.99□□□□□ -0.81
ABCA3-203ENST00000563623 ZNF585BQ52M93 769 aa9.99□□□□□ -0.81
ABCA3-203ENST00000563623 NUFIP2Q7Z417 695 aaKnown RBP9.99□□□□□ -0.81
ABCA3-203ENST00000563623 MAFAQ8NHW3 353 aaPredicted RBP9.99□□□□□ -0.81
ABCA3-203ENST00000563623 LSM10Q969L4 123 aaKnown RBP9.99□□□□□ -0.81
ABCA3-203ENST00000563623 TMEM147Q9BVK8 224 aa9.99□□□□□ -0.81
ABCA3-203ENST00000563623 TRAPPC1Q9Y5R8 145 aa9.99□□□□□ -0.81
ABCA3-203ENST00000563623 TRAV38-1A0A0B4J264 116 aa9.99□□□□□ -0.81
ABCA3-203ENST00000563623 OR5B21A6NL26 309 aa9.99□□□□□ -0.81
ABCA3-203ENST00000563623 J3QT63 122 aa9.99□□□□□ -0.81
ABCA3-203ENST00000563623 SMPD2O60906 423 aa9.99□□□□□ -0.81
ABCA3-203ENST00000563623 LINC00205P59089 165 aa9.99□□□□□ -0.81
ABCA3-203ENST00000563623 EDDM3AQ14507 147 aa9.99□□□□□ -0.81
ABCA3-203ENST00000563623 TMPRSS7Q7RTY8 843 aa9.99□□□□□ -0.81
ABCA3-203ENST00000563623 DEFB127Q9H1M4 99 aa9.99□□□□□ -0.81
ABCA3-203ENST00000563623 VPS13AQ96RL7 3174 aa9.98□□□□□ -0.81
ABCA3-203ENST00000563623 A0A1B0GUS0 222 aa9.98□□□□□ -0.81
ABCA3-203ENST00000563623 DVL1O14640 695 aa9.98□□□□□ -0.81
ABCA3-203ENST00000563623 S1PR2O95136 353 aa9.98□□□□□ -0.81
ABCA3-203ENST00000563623 DUSP3P51452 185 aaPredicted RBP9.98□□□□□ -0.81
ABCA3-203ENST00000563623 TDGF1P3P51864 188 aa9.98□□□□□ -0.81
ABCA3-203ENST00000563623 CATR1Q13166 79 aa9.98□□□□□ -0.81
ABCA3-203ENST00000563623 TRIM61Q5EBN2 209 aa9.98□□□□□ -0.81
ABCA3-203ENST00000563623 Q6ZS49 121 aa9.98□□□□□ -0.81
ABCA3-203ENST00000563623 MRGPRDQ8TDS7 321 aa9.98□□□□□ -0.81
ABCA3-203ENST00000563623 CT55Q8WUE5 264 aa9.98□□□□□ -0.81
ABCA3-203ENST00000563623 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.98□□□□□ -0.81
ABCA3-203ENST00000563623 TMEM242Q9NWH2 141 aa9.98□□□□□ -0.81
ABCA3-203ENST00000563623 MPC1Q9Y5U8 109 aa9.98□□□□□ -0.81
ABCA3-203ENST00000563623 K7ESF4 209 aa9.98□□□□□ -0.81
ABCA3-203ENST00000563623 CDC34P49427 236 aaPredicted RBP9.98□□□□□ -0.81
ABCA3-203ENST00000563623 AESQ08117 197 aa9.98□□□□□ -0.81
ABCA3-203ENST00000563623 LEMD1Q68G75 181 aa9.98□□□□□ -0.81
ABCA3-203ENST00000563623 ZNF826PQ6ZT77 177 aa9.98□□□□□ -0.81
ABCA3-203ENST00000563623 HINT2Q9BX68 163 aa9.98□□□□□ -0.81
ABCA3-203ENST00000563623 TMEM210A6NLX4 147 aa9.97□□□□□ -0.81
ABCA3-203ENST00000563623 CIDEAO60543 219 aa9.97□□□□□ -0.81
ABCA3-203ENST00000563623 NDUFB4O95168 129 aa9.97□□□□□ -0.81
ABCA3-203ENST00000563623 IGHEP01854 428 aa9.97□□□□□ -0.81
ABCA3-203ENST00000563623 PFN1P07737 140 aaKnown RBP9.97□□□□□ -0.81
ABCA3-203ENST00000563623 PAX5Q02548 391 aa9.97□□□□□ -0.81
ABCA3-203ENST00000563623 GCSAMLQ5JQS6 135 aa9.97□□□□□ -0.81
ABCA3-203ENST00000563623 COLCA1Q6ZS62 124 aa9.97□□□□□ -0.81
ABCA3-203ENST00000563623 MDP1Q86V88 176 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms