RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 CXCL2P19875 107 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 CD24P25063 80 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 CDKN2CP42773 168 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 MARCKSL1P49006 195 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 KLF3P57682 345 aaPredicted RBP0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 TAS2R45P59539 299 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 MYL6P60660 151 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 NAA20P61599 178 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 HERVK_113P63121 156 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 SLC35A2P78381 396 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 HLA-DRB3P79483 266 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 CCL7P80098 99 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 APOFQ13790 326 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 KRTAP25-1Q3LHN0 102 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 SAPCD1Q5SSQ6 148 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 C8orf74Q6P047 294 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 SFXN4Q6P4A7 337 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 SBSNQ6UWP8 590 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 LYPD6Q86Y78 171 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 ZNF567Q8N184 647 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 LRRC25Q8N386 305 aaPredicted RBP0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 EIF4E3Q8N5X7 224 aaKnown RBP0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 FNDC9Q8TBE3 224 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 GPR119Q8TDV5 335 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 RBPMSQ93062 196 aaKnown RBP0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 IMP4Q96G21 291 aaKnown RBP0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 ANKRD36BP1Q96IX9 119 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 PRAP1Q96NZ9 151 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 MND1Q9BWT6 205 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 TSSK6Q9BXA6 273 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 AICDAQ9GZX7 198 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 KCNIP2Q9NS61 270 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 ASF1BQ9NVP2 202 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 EMC3Q9P0I2 261 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 DKKL1Q9UK85 242 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 WASHC3Q9Y3C0 194 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 HDGFL3Q9Y3E1 203 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 BRD4O60885 1362 aaPredicted RBP0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 KIF15Q9NS87 1388 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 NAV1Q8NEY1 1877 aa0.9□□□□□ -2.26
HMGB1P33-201ENST00000563485 PLCH2O75038 1416 aa0.9□□□□□ -2.26
HMGB1P33-201ENST00000563485 IGHV3-15A0A0B4J1V0 119 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 A0A0B4J2C4 111 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 A8MWP6 167 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 M0R381 172 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 KPNA3O00505 521 aaPredicted RBP0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 GSTZ1O43708 216 aaPredicted RBP0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 IGKV1-16P04430 117 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 IFNA16P05015 189 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 HLA-DQB2P05538 268 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 IFI30P13284 250 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 ZNF7P17097 686 aaPredicted RBP0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 CXCL3P19876 107 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 ALOX5APP20292 161 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 PRPS1L1P21108 318 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 CRABP2P29373 138 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 CRABP1P29762 137 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 GABRA3P34903 492 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 SULT1A1P50225 295 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 SULT1A2P50226 295 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 DAPP51397 102 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 IDH3GP51553 393 aaPredicted RBP0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 BLVRAP53004 296 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 TSPEAR-AS2P59090 65 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 ACTBP60709 375 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 ACTG1P63261 375 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 CAV1Q03135 178 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 BSPH1Q075Z2 132 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 PPP1R1AQ13522 171 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 GNA13Q14344 377 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 SLC9A3R2Q15599 337 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 ZNF141Q15928 474 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 KRTAP21-3Q3LHN1 58 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 LGALSLQ3ZCW2 172 aaPredicted RBP0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 ACSM3Q53FZ2 586 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 HIST2H3PS2Q5TEC6 136 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 SPOPLQ6IQ16 392 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 TMPPEQ6ZT21 453 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 NAA40Q86UY6 237 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 HS3ST5Q8IZT8 346 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 EEF1AKMT1Q8WVE0 214 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 ASB17Q8WXJ9 295 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 SLC25A44Q96H78 314 aaPredicted RBP0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 OR52E6Q96RD3 313 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 ZNF471Q9BX82 626 aaPredicted RBP0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 TMEM222Q9H0R3 208 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 TAS2R9Q9NYW1 312 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 UBAP1Q9NZ09 502 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 TAAR3PQ9P1P4 343 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 AK3Q9UIJ7 227 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 DNAJC12Q9UKB3 198 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 MCTS1Q9ULC4 181 aaKnown RBP0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 HEY1Q9Y5J3 304 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 FAM215AQ9Y5M1 114 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 V9GYY5 206 aaPredicted RBP0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 ATG2BQ96BY7 2078 aa0.9□□□□□ -2.27
HMGB1P33-201ENST00000563485 ADGRL3Q9HAR2 1447 aa0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 HELZ2Q9BYK8 2649 aaKnown RBP0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 KMT2BQ9UMN6 2715 aaPredicted RBP0.89□□□□□ -2.27
HMGB1P33-201ENST00000563485 MYO9BQ13459 2157 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms