RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 ARG2P78540 354 aa10.95□□□□□ -0.66
USB1-207ENST00000563149 AESQ08117 197 aa10.95□□□□□ -0.66
USB1-207ENST00000563149 AARDQ4LEZ3 155 aa10.95□□□□□ -0.66
USB1-207ENST00000563149 COA6Q5JTJ3 125 aaKnown RBP10.95□□□□□ -0.66
USB1-207ENST00000563149 GFI1BQ5VTD9 330 aa10.95□□□□□ -0.66
USB1-207ENST00000563149 FAM214BQ7L5A3 538 aa10.95□□□□□ -0.66
USB1-207ENST00000563149 C1orf174Q8IYL3 243 aa10.95□□□□□ -0.66
USB1-207ENST00000563149 ZNF808Q8N4W9 903 aaPredicted RBP10.95□□□□□ -0.66
USB1-207ENST00000563149 C1orf162Q8NEQ5 155 aaPredicted RBP10.95□□□□□ -0.66
USB1-207ENST00000563149 OR5R1Q8NH85 324 aa10.95□□□□□ -0.66
USB1-207ENST00000563149 RAB1CQ92928 201 aa10.95□□□□□ -0.66
USB1-207ENST00000563149 RAB24Q969Q5 203 aa10.95□□□□□ -0.66
USB1-207ENST00000563149 BTF3L4Q96K17 158 aa10.95□□□□□ -0.66
USB1-207ENST00000563149 PRDM13Q9H4Q3 707 aa10.95□□□□□ -0.66
USB1-207ENST00000563149 CNTRLQ7Z7A1 2325 aa10.95□□□□□ -0.66
USB1-207ENST00000563149 MYO15AQ9UKN7 3530 aa10.94□□□□□ -0.66
USB1-207ENST00000563149 LNP1A1A4G5 178 aa10.94□□□□□ -0.66
USB1-207ENST00000563149 DVL1O14640 695 aa10.94□□□□□ -0.66
USB1-207ENST00000563149 HRASP01112 189 aa10.94□□□□□ -0.66
USB1-207ENST00000563149 IFNA10P01566 189 aa10.94□□□□□ -0.66
USB1-207ENST00000563149 IGHG3P01860 377 aa10.94□□□□□ -0.66
USB1-207ENST00000563149 FABP4P15090 132 aa10.94□□□□□ -0.66
USB1-207ENST00000563149 GABRA2P47869 451 aa10.94□□□□□ -0.66
USB1-207ENST00000563149 FAM3BP58499 235 aaPredicted RBP10.94□□□□□ -0.66
USB1-207ENST00000563149 MZT1Q08AG7 82 aa10.94□□□□□ -0.66
USB1-207ENST00000563149 RNFT1Q5M7Z0 435 aa10.94□□□□□ -0.66
USB1-207ENST00000563149 VASH2Q86V25 355 aa10.94□□□□□ -0.66
USB1-207ENST00000563149 OR4F5Q8NH21 305 aa10.94□□□□□ -0.66
USB1-207ENST00000563149 RNASEH2CQ8TDP1 164 aaKnown RBP10.94□□□□□ -0.66
USB1-207ENST00000563149 RPUSD4Q96CM3 377 aaKnown RBP10.94□□□□□ -0.66
USB1-207ENST00000563149 ACY3Q96HD9 319 aa10.94□□□□□ -0.66
USB1-207ENST00000563149 OR4F4Q96R69 305 aa10.94□□□□□ -0.66
USB1-207ENST00000563149 R4GN57 208 aa10.94□□□□□ -0.66
USB1-207ENST00000563149 TRBV23-1A0A0A0MS06 115 aa10.93□□□□□ -0.66
USB1-207ENST00000563149 PPP5D1E7EU14 171 aa10.93□□□□□ -0.66
USB1-207ENST00000563149 WNT9BO14905 357 aa10.93□□□□□ -0.66
USB1-207ENST00000563149 SPINT2O43291 252 aa10.93□□□□□ -0.66
USB1-207ENST00000563149 MPDU1O75352 247 aa10.93□□□□□ -0.66
USB1-207ENST00000563149 LYZL6O75951 148 aa10.93□□□□□ -0.66
USB1-207ENST00000563149 HOXC12P31275 282 aa10.93□□□□□ -0.66
USB1-207ENST00000563149 CDC34P49427 236 aaPredicted RBP10.93□□□□□ -0.66
USB1-207ENST00000563149 DEFA6Q01524 100 aa10.93□□□□□ -0.66
USB1-207ENST00000563149 TFF3Q07654 80 aa10.93□□□□□ -0.66
USB1-207ENST00000563149 GUSBP1Q15486 140 aa10.93□□□□□ -0.66
USB1-207ENST00000563149 SMIM21Q3B7S5 101 aa10.93□□□□□ -0.66
USB1-207ENST00000563149 WDR82Q6UXN9 313 aa10.93□□□□□ -0.66
USB1-207ENST00000563149 LINC00469Q8N7U9 141 aa10.93□□□□□ -0.66
USB1-207ENST00000563149 MRGPRDQ8TDS7 321 aa10.93□□□□□ -0.66
USB1-207ENST00000563149 PACRGQ96M98 296 aaPredicted RBP10.93□□□□□ -0.66
USB1-207ENST00000563149 HIST1H2BLQ99880 126 aa10.93□□□□□ -0.66
USB1-207ENST00000563149 TXNDC17Q9BRA2 123 aa10.93□□□□□ -0.66
USB1-207ENST00000563149 PDE6DO43924 150 aa10.93□□□□□ -0.66
USB1-207ENST00000563149 GGCTO75223 188 aaKnown RBP10.93□□□□□ -0.66
USB1-207ENST00000563149 GYPAP02724 150 aa10.93□□□□□ -0.66
USB1-207ENST00000563149 TYMSP04818 313 aa10.93□□□□□ -0.66
USB1-207ENST00000563149 PKIAP61925 76 aa10.93□□□□□ -0.66
USB1-207ENST00000563149 COL10A1Q03692 680 aa10.93□□□□□ -0.66
USB1-207ENST00000563149 C4orf17Q53FE4 359 aa10.93□□□□□ -0.66
USB1-207ENST00000563149 PDZD11Q5EBL8 140 aa10.93□□□□□ -0.66
USB1-207ENST00000563149 ZNF826PQ6ZT77 177 aa10.93□□□□□ -0.66
USB1-207ENST00000563149 MED12LQ86YW9 2145 aa10.93□□□□□ -0.66
USB1-207ENST00000563149 OR1P1Q8NH06 330 aa10.93□□□□□ -0.66
USB1-207ENST00000563149 TMEM170AQ8WVE7 144 aa10.93□□□□□ -0.66
USB1-207ENST00000563149 ZDHHC16Q969W1 377 aa10.93□□□□□ -0.66
USB1-207ENST00000563149 GUCD1Q96NT3 240 aa10.93□□□□□ -0.66
USB1-207ENST00000563149 WDR83OSQ9Y284 106 aa10.93□□□□□ -0.66
USB1-207ENST00000563149 A0A1B0GWJ7 208 aa10.92□□□□□ -0.66
USB1-207ENST00000563149 MARCH11A6NNE9 402 aa10.92□□□□□ -0.66
USB1-207ENST00000563149 TIMM8AO60220 97 aaPredicted RBP10.92□□□□□ -0.66
USB1-207ENST00000563149 PAGE4O60829 102 aa10.92□□□□□ -0.66
USB1-207ENST00000563149 RBMXL2O75526 392 aaKnown RBP10.92□□□□□ -0.66
USB1-207ENST00000563149 HPRT1P00492 218 aa10.92□□□□□ -0.66
USB1-207ENST00000563149 CD99P14209 185 aa10.92□□□□□ -0.66
USB1-207ENST00000563149 ZNF718Q3SXZ3 478 aa10.92□□□□□ -0.66
USB1-207ENST00000563149 PLA2G2CQ5R387 149 aa10.92□□□□□ -0.66
USB1-207ENST00000563149 KCNIP4Q6PIL6 250 aa10.92□□□□□ -0.66
USB1-207ENST00000563149 CISD2Q8N5K1 135 aaKnown RBP10.92□□□□□ -0.66
USB1-207ENST00000563149 OR52E5Q8NH55 327 aa10.92□□□□□ -0.66
USB1-207ENST00000563149 R3HDM4Q96D70 268 aa10.92□□□□□ -0.66
USB1-207ENST00000563149 SNX22Q96L94 193 aa10.92□□□□□ -0.66
USB1-207ENST00000563149 GAB2Q9UQC2 676 aa10.92□□□□□ -0.66
USB1-207ENST00000563149 ZNF407Q9C0G0 2248 aa10.92□□□□□ -0.66
USB1-207ENST00000563149 LINC00473A8K010 186 aa10.91□□□□□ -0.66
USB1-207ENST00000563149 C15orf62A8K5M9 175 aa10.91□□□□□ -0.66
USB1-207ENST00000563149 F6UZH7 168 aa10.91□□□□□ -0.66
USB1-207ENST00000563149 C15orf65H3BRN8 121 aa10.91□□□□□ -0.66
USB1-207ENST00000563149 TMPRSS2O15393 492 aa10.91□□□□□ -0.66
USB1-207ENST00000563149 GZMHP20718 246 aa10.91□□□□□ -0.66
USB1-207ENST00000563149 CD1BP29016 333 aa10.91□□□□□ -0.66
USB1-207ENST00000563149 PDLIM4P50479 330 aa10.91□□□□□ -0.66
USB1-207ENST00000563149 SPCS3P61009 180 aa10.91□□□□□ -0.66
USB1-207ENST00000563149 JOSD1Q15040 202 aaPredicted RBP10.91□□□□□ -0.66
USB1-207ENST00000563149 Q3ZCU0 254 aa10.91□□□□□ -0.66
USB1-207ENST00000563149 PDLIM3Q53GG5 364 aaPredicted RBP10.91□□□□□ -0.66
USB1-207ENST00000563149 C9orf152Q5JTZ5 239 aa10.91□□□□□ -0.66
USB1-207ENST00000563149 MBNL2Q5VZF2 373 aaKnown RBP10.91□□□□□ -0.66
USB1-207ENST00000563149 CDPF1Q6NVV7 123 aa10.91□□□□□ -0.66
USB1-207ENST00000563149 BTNL3Q6UXE8 466 aa10.91□□□□□ -0.66
USB1-207ENST00000563149 OR13A1Q8NGR1 328 aa10.91□□□□□ -0.66
USB1-207ENST00000563149 OR2T10Q8NGZ9 312 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms