RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 IL18R1Q13478 541 aa3.96□□□□□ -1.78
UBR1-203ENST00000562173 EBI3Q14213 229 aa3.96□□□□□ -1.78
UBR1-203ENST00000562173 GNMTQ14749 295 aa3.96□□□□□ -1.78
UBR1-203ENST00000562173 ZSCAN26Q16670 478 aa3.96□□□□□ -1.78
UBR1-203ENST00000562173 LPCAT4Q643R3 524 aa3.96□□□□□ -1.78
UBR1-203ENST00000562173 GLYATQ6IB77 296 aa3.96□□□□□ -1.78
UBR1-203ENST00000562173 TMEM182Q6ZP80 229 aaPredicted RBP3.96□□□□□ -1.78
UBR1-203ENST00000562173 SGPP2Q8IWX5 399 aa3.96□□□□□ -1.78
UBR1-203ENST00000562173 FAM58AQ8N1B3 248 aa3.96□□□□□ -1.78
UBR1-203ENST00000562173 ZNF645Q8N7E2 425 aa3.96□□□□□ -1.78
UBR1-203ENST00000562173 ZNF485Q8NCK3 441 aa3.96□□□□□ -1.78
UBR1-203ENST00000562173 OR6Q1Q8NGQ2 317 aa3.96□□□□□ -1.78
UBR1-203ENST00000562173 ZNF596Q8TC21 504 aa3.96□□□□□ -1.78
UBR1-203ENST00000562173 AKR1E2Q96JD6 320 aa3.96□□□□□ -1.78
UBR1-203ENST00000562173 CLCC1Q96S66 551 aa3.96□□□□□ -1.78
UBR1-203ENST00000562173 OSBPL10Q9BXB5 764 aa3.96□□□□□ -1.78
UBR1-203ENST00000562173 ANKRD60Q9BZ19 345 aa3.96□□□□□ -1.78
UBR1-203ENST00000562173 RIMS4Q9H426 269 aaPredicted RBP3.96□□□□□ -1.78
UBR1-203ENST00000562173 TUBA4BQ9H853 241 aa3.96□□□□□ -1.78
UBR1-203ENST00000562173 IDI2-AS1Q9NZ38 188 aa3.96□□□□□ -1.78
UBR1-203ENST00000562173 MRM2Q9UI43 246 aaKnown RBP3.96□□□□□ -1.78
UBR1-203ENST00000562173 ENPP5Q9UJA9 477 aa3.96□□□□□ -1.78
UBR1-203ENST00000562173 VSIG4Q9Y279 399 aa3.96□□□□□ -1.78
UBR1-203ENST00000562173 A0A0B4J203 849 aa3.95□□□□□ -1.78
UBR1-203ENST00000562173 A0A1B0GU03 582 aa3.95□□□□□ -1.78
UBR1-203ENST00000562173 PRAF2O60831 178 aa3.95□□□□□ -1.78
UBR1-203ENST00000562173 EDF1O60869 148 aaKnown RBP3.95□□□□□ -1.78
UBR1-203ENST00000562173 DHRS3O75911 302 aa3.95□□□□□ -1.78
UBR1-203ENST00000562173 HLA-AP01891 365 aaKnown RBP3.95□□□□□ -1.78
UBR1-203ENST00000562173 LGALS1P09382 135 aaKnown RBP3.95□□□□□ -1.78
UBR1-203ENST00000562173 ZNF44P15621 663 aa3.95□□□□□ -1.78
UBR1-203ENST00000562173 VDAC1P21796 283 aa3.95□□□□□ -1.78
UBR1-203ENST00000562173 PTGFRP43088 359 aa3.95□□□□□ -1.78
UBR1-203ENST00000562173 SYNJ2BPP57105 145 aa3.95□□□□□ -1.78
UBR1-203ENST00000562173 APOFQ13790 326 aa3.95□□□□□ -1.78
UBR1-203ENST00000562173 PIGYQ3MUY2 71 aa3.95□□□□□ -1.78
UBR1-203ENST00000562173 CLVS2Q5SYC1 327 aa3.95□□□□□ -1.78
UBR1-203ENST00000562173 CEMP1Q6PRD7 247 aaPredicted RBP3.95□□□□□ -1.78
UBR1-203ENST00000562173 BTNL8Q6UX41 500 aa3.95□□□□□ -1.78
UBR1-203ENST00000562173 PIGWQ7Z7B1 504 aa3.95□□□□□ -1.78
UBR1-203ENST00000562173 TGIF2LXQ8IUE1 241 aa3.95□□□□□ -1.78
UBR1-203ENST00000562173 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.95□□□□□ -1.78
UBR1-203ENST00000562173 TCEANCQ8N8B7 351 aa3.95□□□□□ -1.78
UBR1-203ENST00000562173 OR51A4Q8NGJ6 313 aa3.95□□□□□ -1.78
UBR1-203ENST00000562173 OR9G1Q8NH87 305 aa3.95□□□□□ -1.78
UBR1-203ENST00000562173 UBE2E2Q96LR5 201 aa3.95□□□□□ -1.78
UBR1-203ENST00000562173 C2orf48Q96LS8 159 aa3.95□□□□□ -1.78
UBR1-203ENST00000562173 MRPL20Q9BYC9 149 aaKnown RBP3.95□□□□□ -1.78
UBR1-203ENST00000562173 SLC5A7Q9GZV3 580 aa3.95□□□□□ -1.78
UBR1-203ENST00000562173 FBXL15Q9H469 300 aa3.95□□□□□ -1.78
UBR1-203ENST00000562173 ANKRD19PQ9H560 264 aa3.95□□□□□ -1.78
UBR1-203ENST00000562173 DCAF13Q9NV06 445 aaKnown RBP3.95□□□□□ -1.78
UBR1-203ENST00000562173 TAS2R3Q9NYW6 316 aa3.95□□□□□ -1.78
UBR1-203ENST00000562173 IL20Q9NYY1 176 aa3.95□□□□□ -1.78
UBR1-203ENST00000562173 IKZF2Q9UKS7 526 aa3.95□□□□□ -1.78
UBR1-203ENST00000562173 RABL2BQ9UNT1 228 aa3.95□□□□□ -1.78
UBR1-203ENST00000562173 TRAV18A0A075B6X5 111 aa3.94□□□□□ -1.78
UBR1-203ENST00000562173 TRGV10A0A0A0MS01 117 aa3.94□□□□□ -1.78
UBR1-203ENST00000562173 TRAV41A0A0B4J266 112 aa3.94□□□□□ -1.78
UBR1-203ENST00000562173 A0A0U1RQV5 110 aa3.94□□□□□ -1.78
UBR1-203ENST00000562173 KBTBD11-OT1A0A1B0GTJ5 212 aa3.94□□□□□ -1.78
UBR1-203ENST00000562173 KRTAP16-1A8MUX0 517 aa3.94□□□□□ -1.78
UBR1-203ENST00000562173 C15orf65H3BRN8 121 aa3.94□□□□□ -1.78
UBR1-203ENST00000562173 K7EQD1 137 aa3.94□□□□□ -1.78
UBR1-203ENST00000562173 IFNA14P01570 189 aa3.94□□□□□ -1.78
UBR1-203ENST00000562173 PRH1P02810 166 aa3.94□□□□□ -1.78
UBR1-203ENST00000562173 IFNA6P05013 189 aa3.94□□□□□ -1.78
UBR1-203ENST00000562173 COX4I1P13073 169 aa3.94□□□□□ -1.78
UBR1-203ENST00000562173 FCGR2BP31994 310 aaPredicted RBP3.94□□□□□ -1.78
UBR1-203ENST00000562173 FUSP35637 526 aaKnown RBP eCLIP3.94□□□□□ -1.78
UBR1-203ENST00000562173 SOX6P35712 828 aa3.94□□□□□ -1.78
UBR1-203ENST00000562173 PSME3P61289 254 aa3.94□□□□□ -1.78
UBR1-203ENST00000562173 ADARB1P78563 741 aaKnown RBP3.94□□□□□ -1.78
UBR1-203ENST00000562173 RUNX1Q01196 453 aa3.94□□□□□ -1.78
UBR1-203ENST00000562173 DEFB135Q30KP9 77 aa3.94□□□□□ -1.78
UBR1-203ENST00000562173 MOGAT2Q3SYC2 334 aa3.94□□□□□ -1.78
UBR1-203ENST00000562173 RSBN1Q5VWQ0 802 aaPredicted RBP3.94□□□□□ -1.78
UBR1-203ENST00000562173 RASSF6Q6ZTQ3 369 aa3.94□□□□□ -1.78
UBR1-203ENST00000562173 LYG2Q86SG7 212 aa3.94□□□□□ -1.78
UBR1-203ENST00000562173 CYP4Z1Q86W10 505 aa3.94□□□□□ -1.78
UBR1-203ENST00000562173 ZNF573Q86YE8 665 aa3.94□□□□□ -1.78
UBR1-203ENST00000562173 COMMD1Q8N668 190 aa3.94□□□□□ -1.78
UBR1-203ENST00000562173 OR52L1Q8NGH7 329 aa3.94□□□□□ -1.78
UBR1-203ENST00000562173 OR1L1Q8NH94 360 aa3.94□□□□□ -1.78
UBR1-203ENST00000562173 RTN4IP1Q8WWV3 396 aaPredicted RBP3.94□□□□□ -1.78
UBR1-203ENST00000562173 OR4C12Q96R67 309 aa3.94□□□□□ -1.78
UBR1-203ENST00000562173 RASL11BQ9BPW5 248 aa3.94□□□□□ -1.78
UBR1-203ENST00000562173 KCTD14Q9BQ13 255 aaPredicted RBP3.94□□□□□ -1.78
UBR1-203ENST00000562173 PKIBQ9C010 78 aa3.94□□□□□ -1.78
UBR1-203ENST00000562173 OR51J1Q9H342 316 aa3.94□□□□□ -1.78
UBR1-203ENST00000562173 VIPAS39Q9H9C1 493 aa3.94□□□□□ -1.78
UBR1-203ENST00000562173 HMG20AQ9NP66 347 aa3.94□□□□□ -1.78
UBR1-203ENST00000562173 EXOSC4Q9NPD3 245 aaKnown RBP3.94□□□□□ -1.78
UBR1-203ENST00000562173 CMC2Q9NRP2 79 aa3.94□□□□□ -1.78
UBR1-203ENST00000562173 FGFR1OP2Q9NVK5 253 aa3.94□□□□□ -1.78
UBR1-203ENST00000562173 CD300AQ9UGN4 299 aa3.94□□□□□ -1.78
UBR1-203ENST00000562173 UBQLN2Q9UHD9 624 aa3.94□□□□□ -1.78
UBR1-203ENST00000562173 NUFIP1Q9UHK0 495 aaKnown RBP3.94□□□□□ -1.78
UBR1-203ENST00000562173 OR52A1Q9UKL2 312 aa3.94□□□□□ -1.78
UBR1-203ENST00000562173 RRP15Q9Y3B9 282 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms