RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 METTL1Q9UBP6 276 aaKnown RBP8□□□□□ -1.13
HERC1-212ENST00000561348 SCOCQ9UIL1 159 aa8□□□□□ -1.13
HERC1-212ENST00000561348 OR2W1Q9Y3N9 320 aa8□□□□□ -1.13
HERC1-212ENST00000561348 NBEAL1Q6ZS30 2694 aa7.99□□□□□ -1.13
HERC1-212ENST00000561348 RRHO14718 337 aa7.99□□□□□ -1.13
HERC1-212ENST00000561348 SHOXO15266 292 aa7.99□□□□□ -1.13
HERC1-212ENST00000561348 TNFSF12O43508 249 aa7.99□□□□□ -1.13
HERC1-212ENST00000561348 SLC25A17O43808 307 aa7.99□□□□□ -1.13
HERC1-212ENST00000561348 TMEM127O75204 238 aa7.99□□□□□ -1.13
HERC1-212ENST00000561348 PROP1O75360 226 aa7.99□□□□□ -1.13
HERC1-212ENST00000561348 DIRAS3O95661 229 aa7.99□□□□□ -1.13
HERC1-212ENST00000561348 IGHG2P01859 326 aa7.99□□□□□ -1.13
HERC1-212ENST00000561348 PMP2P02689 132 aa7.99□□□□□ -1.13
HERC1-212ENST00000561348 IGKV1-16P04430 117 aa7.99□□□□□ -1.13
HERC1-212ENST00000561348 OR5H8P0DN80 308 aa7.99□□□□□ -1.13
HERC1-212ENST00000561348 ZNF182P17025 639 aaPredicted RBP7.99□□□□□ -1.13
HERC1-212ENST00000561348 AADACP22760 399 aa7.99□□□□□ -1.13
HERC1-212ENST00000561348 HLA-DMAP28067 261 aa7.99□□□□□ -1.13
HERC1-212ENST00000561348 CBX5P45973 191 aa7.99□□□□□ -1.13
HERC1-212ENST00000561348 RPL5P46777 297 aaKnown RBP7.99□□□□□ -1.13
HERC1-212ENST00000561348 THBS3P49746 956 aa7.99□□□□□ -1.13
HERC1-212ENST00000561348 RAB25P57735 213 aa7.99□□□□□ -1.13
HERC1-212ENST00000561348 HERV-K104P61576 105 aa7.99□□□□□ -1.13
HERC1-212ENST00000561348 SPCS2Q15005 226 aa7.99□□□□□ -1.13
HERC1-212ENST00000561348 SRSF7Q16629 238 aaKnown RBP eCLIP7.99□□□□□ -1.13
HERC1-212ENST00000561348 C5orf64Q2M2E5 130 aa7.99□□□□□ -1.13
HERC1-212ENST00000561348 TMEM17Q86X19 198 aa7.99□□□□□ -1.13
HERC1-212ENST00000561348 HOGA1Q86XE5 327 aa7.99□□□□□ -1.13
HERC1-212ENST00000561348 NDUFA11Q86Y39 141 aa7.99□□□□□ -1.13
HERC1-212ENST00000561348 FAM71E2Q8N5Q1 922 aa7.99□□□□□ -1.13
HERC1-212ENST00000561348 TCTEX1D2Q8WW35 142 aa7.99□□□□□ -1.13
HERC1-212ENST00000561348 ACOT12Q8WYK0 555 aa7.99□□□□□ -1.13
HERC1-212ENST00000561348 GPHA2Q96T91 129 aa7.99□□□□□ -1.13
HERC1-212ENST00000561348 TSNAXQ99598 290 aaKnown RBP7.99□□□□□ -1.13
HERC1-212ENST00000561348 TAS2R8Q9NYW2 309 aa7.99□□□□□ -1.13
HERC1-212ENST00000561348 EHFQ9NZC4 300 aa7.99□□□□□ -1.13
HERC1-212ENST00000561348 TSSC4Q9Y5U2 329 aaPredicted RBP7.99□□□□□ -1.13
HERC1-212ENST00000561348 WNK1Q9H4A3 2382 aa7.98□□□□□ -1.13
HERC1-212ENST00000561348 IGKV1D-13A0A0B4J2D9 117 aa7.98□□□□□ -1.13
HERC1-212ENST00000561348 G3V318 75 aa7.98□□□□□ -1.13
HERC1-212ENST00000561348 FCN1O00602 326 aa7.98□□□□□ -1.13
HERC1-212ENST00000561348 ATP6V0E1O15342 81 aa7.98□□□□□ -1.13
HERC1-212ENST00000561348 FCGR3BO75015 233 aa7.98□□□□□ -1.13
HERC1-212ENST00000561348 CNIH1O95406 144 aa7.98□□□□□ -1.13
HERC1-212ENST00000561348 CRYZL1O95825 349 aa7.98□□□□□ -1.13
HERC1-212ENST00000561348 APOA1P02647 267 aa7.98□□□□□ -1.13
HERC1-212ENST00000561348 IGKV1-13P0DP09 117 aa7.98□□□□□ -1.13
HERC1-212ENST00000561348 RFX2P48378 723 aa7.98□□□□□ -1.13
HERC1-212ENST00000561348 TAGLNQ01995 201 aaKnown RBP7.98□□□□□ -1.13
HERC1-212ENST00000561348 PSG5Q15238 335 aa7.98□□□□□ -1.13
HERC1-212ENST00000561348 TCTEX1D4Q5JR98 221 aa7.98□□□□□ -1.13
HERC1-212ENST00000561348 CXorf66Q5JRM2 361 aaPredicted RBP7.98□□□□□ -1.13
HERC1-212ENST00000561348 Q6ZS49 121 aa7.98□□□□□ -1.13
HERC1-212ENST00000561348 KCTD9Q7L273 389 aa7.98□□□□□ -1.13
HERC1-212ENST00000561348 ZNF645Q8N7E2 425 aa7.98□□□□□ -1.13
HERC1-212ENST00000561348 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.98□□□□□ -1.13
HERC1-212ENST00000561348 KLHL30-AS1Q8NEE0 82 aa7.98□□□□□ -1.13
HERC1-212ENST00000561348 OR4F17Q8NGA8 305 aa7.98□□□□□ -1.13
HERC1-212ENST00000561348 OR5AN1Q8NGI8 311 aa7.98□□□□□ -1.13
HERC1-212ENST00000561348 OR5H2Q8NGV7 314 aa7.98□□□□□ -1.13
HERC1-212ENST00000561348 GRPEL2Q8TAA5 225 aa7.98□□□□□ -1.13
HERC1-212ENST00000561348 CASTOR1Q8WTX7 329 aa7.98□□□□□ -1.13
HERC1-212ENST00000561348 C5orf30Q96GV9 206 aa7.98□□□□□ -1.13
HERC1-212ENST00000561348 HARBI1Q96MB7 349 aa7.98□□□□□ -1.13
HERC1-212ENST00000561348 OR4F4Q96R69 305 aa7.98□□□□□ -1.13
HERC1-212ENST00000561348 FAM103A1Q9BTL3 118 aaKnown RBP7.98□□□□□ -1.13
HERC1-212ENST00000561348 GON7Q9BXV9 100 aa7.98□□□□□ -1.13
HERC1-212ENST00000561348 SLC5A7Q9GZV3 580 aa7.98□□□□□ -1.13
HERC1-212ENST00000561348 OR51J1Q9H342 316 aa7.98□□□□□ -1.13
HERC1-212ENST00000561348 CCL28Q9NRJ3 127 aa7.98□□□□□ -1.13
HERC1-212ENST00000561348 EXTL2Q9UBQ6 330 aa7.98□□□□□ -1.13
HERC1-212ENST00000561348 FBN3Q75N90 2809 aa7.98□□□□□ -1.13
HERC1-212ENST00000561348 RBBP9O75884 186 aa7.97□□□□□ -1.13
HERC1-212ENST00000561348 CA2P00918 260 aa7.97□□□□□ -1.13
HERC1-212ENST00000561348 RPLP1P05386 114 aaKnown RBP7.97□□□□□ -1.13
HERC1-212ENST00000561348 APELAP0DMC3 54 aa7.97□□□□□ -1.13
HERC1-212ENST00000561348 TSPAN5P62079 268 aa7.97□□□□□ -1.13
HERC1-212ENST00000561348 CD83Q01151 205 aa7.97□□□□□ -1.13
HERC1-212ENST00000561348 CDK10Q15131 360 aa7.97□□□□□ -1.13
HERC1-212ENST00000561348 LINC01559Q495D7 138 aa7.97□□□□□ -1.13
HERC1-212ENST00000561348 TEX38Q6PEX7 206 aa7.97□□□□□ -1.13
HERC1-212ENST00000561348 TMEM65Q6PI78 240 aa7.97□□□□□ -1.13
HERC1-212ENST00000561348 IDO2Q6ZQW0 420 aa7.97□□□□□ -1.13
HERC1-212ENST00000561348 C18orf65Q6ZTR6 163 aa7.97□□□□□ -1.13
HERC1-212ENST00000561348 PDPNQ86YL7 162 aa7.97□□□□□ -1.13
HERC1-212ENST00000561348 NPBQ8NG41 125 aa7.97□□□□□ -1.13
HERC1-212ENST00000561348 OR5AP2Q8NGF4 316 aa7.97□□□□□ -1.13
HERC1-212ENST00000561348 RAB2BQ8WUD1 216 aa7.97□□□□□ -1.13
HERC1-212ENST00000561348 SNAPC3Q92966 411 aa7.97□□□□□ -1.13
HERC1-212ENST00000561348 DUX3Q96PT4 197 aa7.97□□□□□ -1.13
HERC1-212ENST00000561348 OR5B12Q96R08 314 aa7.97□□□□□ -1.13
HERC1-212ENST00000561348 C6orf62Q9GZU0 229 aaPredicted RBP7.97□□□□□ -1.13
HERC1-212ENST00000561348 TPSG1Q9NRR2 321 aa7.97□□□□□ -1.13
HERC1-212ENST00000561348 ZNF355PQ9NSJ1 428 aa7.97□□□□□ -1.13
HERC1-212ENST00000561348 PRELID3BQ9Y3B1 194 aa7.97□□□□□ -1.13
HERC1-212ENST00000561348 IGHV7-81A0A0B4J1V7 117 aa7.96□□□□□ -1.14
HERC1-212ENST00000561348 TRAV41A0A0B4J266 112 aa7.96□□□□□ -1.14
HERC1-212ENST00000561348 A0A1W2PN81 502 aa7.96□□□□□ -1.14
HERC1-212ENST00000561348 LINC00473A8K010 186 aa7.96□□□□□ -1.14
HERC1-212ENST00000561348 CTDSP2O14595 271 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms