RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 CKLFQ9UBR5 152 aa7.08□□□□□ -1.28
HERC1-210ENST00000560897 APOBP04114 4563 aaKnown RBP7.07□□□□□ -1.28
HERC1-210ENST00000560897 IGKV1-9A0A0C4DH69 117 aa7.07□□□□□ -1.28
HERC1-210ENST00000560897 KIR2DL5BA0A0G2JN68 375 aa7.07□□□□□ -1.28
HERC1-210ENST00000560897 KIR2DL5BA0A0G2JPC4 375 aa7.07□□□□□ -1.28
HERC1-210ENST00000560897 LOC107986453A0A1B0GWG9 222 aa7.07□□□□□ -1.28
HERC1-210ENST00000560897 C15orf65H3BRN8 121 aa7.07□□□□□ -1.28
HERC1-210ENST00000560897 ORC5O43913 435 aa7.07□□□□□ -1.28
HERC1-210ENST00000560897 CA2P00918 260 aa7.07□□□□□ -1.28
HERC1-210ENST00000560897 P0DMU3 169 aa7.07□□□□□ -1.28
HERC1-210ENST00000560897 FAM231AP0DMU4 169 aa7.07□□□□□ -1.28
HERC1-210ENST00000560897 FAM231CP0DMU5 169 aa7.07□□□□□ -1.28
HERC1-210ENST00000560897 FOLR2P14207 255 aa7.07□□□□□ -1.28
HERC1-210ENST00000560897 PSMA1P25786 263 aaKnown RBP7.07□□□□□ -1.28
HERC1-210ENST00000560897 MAPK3P27361 379 aaPredicted RBP7.07□□□□□ -1.28
HERC1-210ENST00000560897 LGALS7P47929 136 aa7.07□□□□□ -1.28
HERC1-210ENST00000560897 IL13RA2Q14627 380 aa7.07□□□□□ -1.28
HERC1-210ENST00000560897 TRAM1Q15629 374 aa7.07□□□□□ -1.28
HERC1-210ENST00000560897 LGALS9BQ3B8N2 356 aa7.07□□□□□ -1.28
HERC1-210ENST00000560897 CT45A1Q5HYN5 189 aa7.07□□□□□ -1.28
HERC1-210ENST00000560897 STEAP3Q658P3 488 aa7.07□□□□□ -1.28
HERC1-210ENST00000560897 SPARTQ8N0X7 666 aa7.07□□□□□ -1.28
HERC1-210ENST00000560897 KIR2DL5AQ8N109 375 aa7.07□□□□□ -1.28
HERC1-210ENST00000560897 POM121L12Q8N7R1 296 aa7.07□□□□□ -1.28
HERC1-210ENST00000560897 ZNF439Q8NDP4 499 aa7.07□□□□□ -1.28
HERC1-210ENST00000560897 OR5D14Q8NGL3 314 aa7.07□□□□□ -1.28
HERC1-210ENST00000560897 KIR2DL5BQ8NHK3 375 aa7.07□□□□□ -1.28
HERC1-210ENST00000560897 CT45A3Q8NHU0 189 aa7.07□□□□□ -1.28
HERC1-210ENST00000560897 NEK7Q8TDX7 302 aa7.07□□□□□ -1.28
HERC1-210ENST00000560897 GHSRQ92847 366 aa7.07□□□□□ -1.28
HERC1-210ENST00000560897 MGLLQ99685 303 aa7.07□□□□□ -1.28
HERC1-210ENST00000560897 ABHD14AQ9BUJ0 271 aa7.07□□□□□ -1.28
HERC1-210ENST00000560897 C11orf68Q9H3H3 251 aaKnown RBP7.07□□□□□ -1.28
HERC1-210ENST00000560897 ACOT13Q9NPJ3 140 aa7.07□□□□□ -1.28
HERC1-210ENST00000560897 FRRS1LQ9P0K9 344 aa7.07□□□□□ -1.28
HERC1-210ENST00000560897 GAB2Q9UQC2 676 aa7.07□□□□□ -1.28
HERC1-210ENST00000560897 C2orf70A6NJV1 201 aa7.06□□□□□ -1.28
HERC1-210ENST00000560897 FCN1O00602 326 aa7.06□□□□□ -1.28
HERC1-210ENST00000560897 SLC22A1O15245 554 aa7.06□□□□□ -1.28
HERC1-210ENST00000560897 NOL3O60936 208 aaKnown RBP7.06□□□□□ -1.28
HERC1-210ENST00000560897 SCAF4O95104 1147 aaKnown RBP7.06□□□□□ -1.28
HERC1-210ENST00000560897 INAFM2P0DMQ5 153 aa7.06□□□□□ -1.28
HERC1-210ENST00000560897 RANBP1P43487 201 aa7.06□□□□□ -1.28
HERC1-210ENST00000560897 SOX2P48431 317 aa7.06□□□□□ -1.28
HERC1-210ENST00000560897 ZNF134P52741 427 aa7.06□□□□□ -1.28
HERC1-210ENST00000560897 PPP3R1P63098 170 aa7.06□□□□□ -1.28
HERC1-210ENST00000560897 DEFA5Q01523 94 aa7.06□□□□□ -1.28
HERC1-210ENST00000560897 MLLT11Q13015 90 aaPredicted RBP7.06□□□□□ -1.28
HERC1-210ENST00000560897 TBCEQ15813 527 aaPredicted RBP7.06□□□□□ -1.28
HERC1-210ENST00000560897 TIMM50Q3ZCQ8 353 aa7.06□□□□□ -1.28
HERC1-210ENST00000560897 YIF1BQ5BJH7 314 aa7.06□□□□□ -1.28
HERC1-210ENST00000560897 LIPKQ5VXJ0 399 aa7.06□□□□□ -1.28
HERC1-210ENST00000560897 PVRIGQ6DKI7 326 aa7.06□□□□□ -1.28
HERC1-210ENST00000560897 FDX2Q6P4F2 183 aa7.06□□□□□ -1.28
HERC1-210ENST00000560897 ZNF562Q6V9R5 426 aa7.06□□□□□ -1.28
HERC1-210ENST00000560897 SERPINA12Q8IW75 414 aa7.06□□□□□ -1.28
HERC1-210ENST00000560897 SLC38A6Q8IZM9 456 aa7.06□□□□□ -1.28
HERC1-210ENST00000560897 TMEM61Q8N0U2 210 aa7.06□□□□□ -1.28
HERC1-210ENST00000560897 PRR18Q8N4B5 295 aa7.06□□□□□ -1.28
HERC1-210ENST00000560897 ZFP41Q8N8Y5 198 aa7.06□□□□□ -1.28
HERC1-210ENST00000560897 SUMF2Q8NBJ7 301 aa7.06□□□□□ -1.28
HERC1-210ENST00000560897 OR1L6Q8NGR2 347 aa7.06□□□□□ -1.28
HERC1-210ENST00000560897 SMIM19Q96E16 107 aa7.06□□□□□ -1.28
HERC1-210ENST00000560897 MRPS24Q96EL2 167 aaKnown RBP7.06□□□□□ -1.28
HERC1-210ENST00000560897 ADAT3Q96EY9 351 aaPredicted RBP7.06□□□□□ -1.28
HERC1-210ENST00000560897 CPNE2Q96FN4 548 aaPredicted RBP7.06□□□□□ -1.28
HERC1-210ENST00000560897 RARRES2Q99969 163 aa7.06□□□□□ -1.28
HERC1-210ENST00000560897 PDCD1LG2Q9BQ51 273 aa7.06□□□□□ -1.28
HERC1-210ENST00000560897 MRPS26Q9BYN8 205 aaKnown RBP7.06□□□□□ -1.28
HERC1-210ENST00000560897 PAK1IP1Q9NWT1 392 aaPredicted RBP7.06□□□□□ -1.28
HERC1-210ENST00000560897 COA4Q9NYJ1 87 aa7.06□□□□□ -1.28
HERC1-210ENST00000560897 METTL1Q9UBP6 276 aaKnown RBP7.06□□□□□ -1.28
HERC1-210ENST00000560897 ING4Q9UNL4 249 aa7.06□□□□□ -1.28
HERC1-210ENST00000560897 IGHV4-4A0A075B6R2 117 aa7.05□□□□□ -1.28
HERC1-210ENST00000560897 EPM2AB3EWF7 344 aa7.05□□□□□ -1.28
HERC1-210ENST00000560897 E9PI62 339 aa7.05□□□□□ -1.28
HERC1-210ENST00000560897 H7C2Y5 167 aa7.05□□□□□ -1.28
HERC1-210ENST00000560897 AIPO00170 330 aa7.05□□□□□ -1.28
HERC1-210ENST00000560897 OGG1O15527 345 aa7.05□□□□□ -1.28
HERC1-210ENST00000560897 TUSC2O75896 110 aa7.05□□□□□ -1.28
HERC1-210ENST00000560897 ISG15P05161 165 aa7.05□□□□□ -1.28
HERC1-210ENST00000560897 RPL35AP18077 110 aaKnown RBP7.05□□□□□ -1.28
HERC1-210ENST00000560897 FXYD3Q14802 87 aa7.05□□□□□ -1.28
HERC1-210ENST00000560897 C6orf183Q5T699 404 aa7.05□□□□□ -1.28
HERC1-210ENST00000560897 FAM131AQ6UXB0 335 aa7.05□□□□□ -1.28
HERC1-210ENST00000560897 RBPMS2Q6ZRY4 209 aaKnown RBP7.05□□□□□ -1.28
HERC1-210ENST00000560897 PRSS35Q8N3Z0 413 aa7.05□□□□□ -1.28
HERC1-210ENST00000560897 OR13C9Q8NGT0 318 aa7.05□□□□□ -1.28
HERC1-210ENST00000560897 TMEM203Q969S6 136 aa7.05□□□□□ -1.28
HERC1-210ENST00000560897 FGGYQ96C11 551 aa7.05□□□□□ -1.28
HERC1-210ENST00000560897 TMEM68Q96MH6 324 aa7.05□□□□□ -1.28
HERC1-210ENST00000560897 GPER1Q99527 375 aa7.05□□□□□ -1.28
HERC1-210ENST00000560897 S100A13Q99584 98 aa7.05□□□□□ -1.28
HERC1-210ENST00000560897 C6orf62Q9GZU0 229 aaPredicted RBP7.05□□□□□ -1.28
HERC1-210ENST00000560897 SSR3Q9UNL2 185 aa7.05□□□□□ -1.28
HERC1-210ENST00000560897 SELENOKQ9Y6D0 94 aa7.05□□□□□ -1.28
HERC1-210ENST00000560897 DNAH5Q8TE73 4624 aa7.04□□□□□ -1.28
HERC1-210ENST00000560897 OR4C45A6NMZ5 311 aa7.04□□□□□ -1.28
HERC1-210ENST00000560897 BMPR1BO00238 502 aa7.04□□□□□ -1.28
HERC1-210ENST00000560897 RBBP9O75884 186 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms