RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 PSG11Q9UQ72 335 aa5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 TCF20Q9UGU0 1960 aaKnown RBP5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 A0A1W2PP11 408 aa5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 FAM166BA8MTA8 275 aa5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 ATP5LO75964 103 aa5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 GNB3P16520 340 aa5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 ANOS1P23352 680 aa5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 TSPOP30536 169 aa5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 OTX1P32242 354 aaPredicted RBP5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 SRP14P37108 136 aaKnown RBP5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 OR4A47Q6IF82 309 aa5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 CDC20BQ86Y33 519 aa5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 SFTPA2Q8IWL1 248 aa5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 SFTPA1Q8IWL2 248 aa5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 KLHDC3Q9BQ90 382 aa5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 AGMATQ9BSE5 352 aa5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 ZNF703Q9H7S9 590 aaPredicted RBP5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 EHFQ9NZC4 300 aa5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 GNG13Q9P2W3 67 aa5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 DEC1Q9P2X7 70 aa5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 RFNGQ9Y644 331 aa5.65□□□□□ -1.5
TSPAN3-209ENST00000560715 PLXND1Q9Y4D7 1925 aa5.65□□□□□ -1.51
TSPAN3-209ENST00000560715 IGLC7A0M8Q6 106 aa5.65□□□□□ -1.51
TSPAN3-209ENST00000560715 GAGE12BA1L429 117 aa5.65□□□□□ -1.51
TSPAN3-209ENST00000560715 OR6C6A6NF89 314 aa5.65□□□□□ -1.51
TSPAN3-209ENST00000560715 SHISA7A6NL88 538 aa5.65□□□□□ -1.51
TSPAN3-209ENST00000560715 RAMP3O60896 148 aa5.65□□□□□ -1.51
TSPAN3-209ENST00000560715 CDS2O95674 445 aa5.65□□□□□ -1.51
TSPAN3-209ENST00000560715 BCL2P10415 239 aa5.65□□□□□ -1.51
TSPAN3-209ENST00000560715 GABRA3P34903 492 aa5.65□□□□□ -1.51
TSPAN3-209ENST00000560715 PAX2Q02962 417 aa5.65□□□□□ -1.51
TSPAN3-209ENST00000560715 MFGE8Q08431 387 aaPredicted RBP5.65□□□□□ -1.51
TSPAN3-209ENST00000560715 ADIRFQ15847 76 aa5.65□□□□□ -1.51
TSPAN3-209ENST00000560715 TRMT12Q53H54 448 aaKnown RBP5.65□□□□□ -1.51
TSPAN3-209ENST00000560715 C1orf100Q5SVJ3 147 aa5.65□□□□□ -1.51
TSPAN3-209ENST00000560715 PNKDQ8N490 385 aa5.65□□□□□ -1.51
TSPAN3-209ENST00000560715 Q8N976 141 aa5.65□□□□□ -1.51
TSPAN3-209ENST00000560715 GATAD1Q8WUU5 269 aa5.65□□□□□ -1.51
TSPAN3-209ENST00000560715 MRPL24Q96A35 216 aaKnown RBP5.65□□□□□ -1.51
TSPAN3-209ENST00000560715 DDIT4LQ96D03 193 aa5.65□□□□□ -1.51
TSPAN3-209ENST00000560715 MBD6Q96DN6 1003 aa5.65□□□□□ -1.51
TSPAN3-209ENST00000560715 TAS2R4Q9NYW5 299 aa5.65□□□□□ -1.51
TSPAN3-209ENST00000560715 PXMP4Q9Y6I8 212 aa5.65□□□□□ -1.51
TSPAN3-209ENST00000560715 LAMA2P24043 3122 aaKnown RBP5.64□□□□□ -1.51
TSPAN3-209ENST00000560715 IGHV2-26A0A0B4J1V2 119 aa5.64□□□□□ -1.51
TSPAN3-209ENST00000560715 hDV102S1A0JD36 115 aa5.64□□□□□ -1.51
TSPAN3-209ENST00000560715 CDIPTO14735 213 aa5.64□□□□□ -1.51
TSPAN3-209ENST00000560715 RBMXL2O75526 392 aaKnown RBP5.64□□□□□ -1.51
TSPAN3-209ENST00000560715 C1orf105O95561 183 aa5.64□□□□□ -1.51
TSPAN3-209ENST00000560715 GABRA2P47869 451 aa5.64□□□□□ -1.51
TSPAN3-209ENST00000560715 CLDN17P56750 224 aa5.64□□□□□ -1.51
TSPAN3-209ENST00000560715 TAS2R30P59541 319 aa5.64□□□□□ -1.51
TSPAN3-209ENST00000560715 CX3CL1P78423 397 aa5.64□□□□□ -1.51
TSPAN3-209ENST00000560715 DPTQ07507 201 aa5.64□□□□□ -1.51
TSPAN3-209ENST00000560715 PDGFRLQ15198 375 aa5.64□□□□□ -1.51
TSPAN3-209ENST00000560715 LRRC10Q5BKY1 277 aa5.64□□□□□ -1.51
TSPAN3-209ENST00000560715 CYP2G1PQ6ZSU1 146 aa5.64□□□□□ -1.51
TSPAN3-209ENST00000560715 FBXL14Q8N1E6 418 aa5.64□□□□□ -1.51
TSPAN3-209ENST00000560715 GCSAMQ8N6F7 178 aa5.64□□□□□ -1.51
TSPAN3-209ENST00000560715 OR52R1Q8NGF1 315 aa5.64□□□□□ -1.51
TSPAN3-209ENST00000560715 OR5AR1Q8NGP9 310 aa5.64□□□□□ -1.51
TSPAN3-209ENST00000560715 OR11L1Q8NGX0 322 aa5.64□□□□□ -1.51
TSPAN3-209ENST00000560715 OR13G1Q8NGZ3 307 aa5.64□□□□□ -1.51
TSPAN3-209ENST00000560715 TRAPPC1Q9Y5R8 145 aa5.64□□□□□ -1.51
TSPAN3-209ENST00000560715 COL4A3Q01955 1670 aa5.64□□□□□ -1.51
TSPAN3-209ENST00000560715 CENPVL1A0A0U1RR11 272 aa5.64□□□□□ -1.51
TSPAN3-209ENST00000560715 OR7C2O60412 319 aa5.64□□□□□ -1.51
TSPAN3-209ENST00000560715 KITLGP21583 273 aa5.64□□□□□ -1.51
TSPAN3-209ENST00000560715 BSXQ3C1V8 233 aa5.64□□□□□ -1.51
TSPAN3-209ENST00000560715 ZNF658BQ4V348 819 aaPredicted RBP5.64□□□□□ -1.51
TSPAN3-209ENST00000560715 OR5H2Q8NGV7 314 aa5.64□□□□□ -1.51
TSPAN3-209ENST00000560715 FAM131CQ96AQ9 280 aa5.64□□□□□ -1.51
TSPAN3-209ENST00000560715 STARD4Q96DR4 205 aa5.64□□□□□ -1.51
TSPAN3-209ENST00000560715 GNPNAT1Q96EK6 184 aaPredicted RBP5.64□□□□□ -1.51
TSPAN3-209ENST00000560715 OR51I2Q9H344 312 aa5.64□□□□□ -1.51
TSPAN3-209ENST00000560715 ZNF586Q9NXT0 402 aa5.64□□□□□ -1.51
TSPAN3-209ENST00000560715 TICRRQ7Z2Z1 1910 aa5.63□□□□□ -1.51
TSPAN3-209ENST00000560715 A0A0A6YYD5 115 aa5.63□□□□□ -1.51
TSPAN3-209ENST00000560715 DIRC3C9JPN6 131 aa5.63□□□□□ -1.51
TSPAN3-209ENST00000560715 RBFOX2O43251 390 aaKnown RBP eCLIP5.63□□□□□ -1.51
TSPAN3-209ENST00000560715 PITX3O75364 302 aa5.63□□□□□ -1.51
TSPAN3-209ENST00000560715 SERPINA7P05543 415 aa5.63□□□□□ -1.51
TSPAN3-209ENST00000560715 RNASE1P07998 156 aaKnown RBP5.63□□□□□ -1.51
TSPAN3-209ENST00000560715 CLEC12BQ2HXU8 276 aa5.63□□□□□ -1.51
TSPAN3-209ENST00000560715 DNM1P34Q6PK57 102 aa5.63□□□□□ -1.51
TSPAN3-209ENST00000560715 LYPD6Q86Y78 171 aa5.63□□□□□ -1.51
TSPAN3-209ENST00000560715 CDRT4Q8N9R6 151 aa5.63□□□□□ -1.51
TSPAN3-209ENST00000560715 OR10W1Q8NGF6 305 aa5.63□□□□□ -1.51
TSPAN3-209ENST00000560715 NUS1Q96E22 293 aa5.63□□□□□ -1.51
TSPAN3-209ENST00000560715 CNRIP1Q96F85 164 aaPredicted RBP5.63□□□□□ -1.51
TSPAN3-209ENST00000560715 BTF3L4Q96K17 158 aa5.63□□□□□ -1.51
TSPAN3-209ENST00000560715 NICN1Q9BSH3 213 aa5.63□□□□□ -1.51
TSPAN3-209ENST00000560715 A0A0B4J2E0 115 aa5.63□□□□□ -1.51
TSPAN3-209ENST00000560715 A0A1B0GX12 115 aa5.63□□□□□ -1.51
TSPAN3-209ENST00000560715 OTOL1A6NHN0 477 aaPredicted RBP5.63□□□□□ -1.51
TSPAN3-209ENST00000560715 GJE1A6NN92 205 aa5.63□□□□□ -1.51
TSPAN3-209ENST00000560715 ALOX5APP20292 161 aa5.63□□□□□ -1.51
TSPAN3-209ENST00000560715 GPR1P46091 355 aa5.63□□□□□ -1.51
TSPAN3-209ENST00000560715 LINC00310P59036 64 aa5.63□□□□□ -1.51
TSPAN3-209ENST00000560715 B3GALT5-AS1P59052 145 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms