RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 FAM53AQ6NSI3 398 aaPredicted RBP11.39□□□□□ -0.59
CSPG4P11-201ENST00000560634 MUC15Q8N387 334 aa11.39□□□□□ -0.59
CSPG4P11-201ENST00000560634 TEX29Q8N6K0 151 aa11.39□□□□□ -0.59
CSPG4P11-201ENST00000560634 OR51G1Q8NGK1 321 aa11.39□□□□□ -0.59
CSPG4P11-201ENST00000560634 DDB2Q92466 427 aa11.39□□□□□ -0.59
CSPG4P11-201ENST00000560634 ZDHHC8Q9ULC8 765 aa11.39□□□□□ -0.59
CSPG4P11-201ENST00000560634 ODAMA1E959 279 aa11.38□□□□□ -0.59
CSPG4P11-201ENST00000560634 KCNAB3O43448 404 aa11.38□□□□□ -0.59
CSPG4P11-201ENST00000560634 RND2P52198 227 aa11.38□□□□□ -0.59
CSPG4P11-201ENST00000560634 RND3P61587 244 aa11.38□□□□□ -0.59
CSPG4P11-201ENST00000560634 PSG9Q00887 426 aa11.38□□□□□ -0.59
CSPG4P11-201ENST00000560634 WDR25Q64LD2 544 aaPredicted RBP11.38□□□□□ -0.59
CSPG4P11-201ENST00000560634 TPRX1Q8N7U7 411 aa11.38□□□□□ -0.59
CSPG4P11-201ENST00000560634 AUP1Q9Y679 476 aa11.38□□□□□ -0.59
CSPG4P11-201ENST00000560634 TMEM250H0YL14 139 aa11.38□□□□□ -0.59
CSPG4P11-201ENST00000560634 S1PR2O95136 353 aa11.38□□□□□ -0.59
CSPG4P11-201ENST00000560634 SSTR5P35346 364 aa11.38□□□□□ -0.59
CSPG4P11-201ENST00000560634 METTL1Q9UBP6 276 aaKnown RBP11.38□□□□□ -0.59
CSPG4P11-201ENST00000560634 PRR33A8MZF0 331 aa11.38□□□□□ -0.59
CSPG4P11-201ENST00000560634 H0YL77 283 aa11.38□□□□□ -0.59
CSPG4P11-201ENST00000560634 TNFRSF9Q07011 255 aa11.38□□□□□ -0.59
CSPG4P11-201ENST00000560634 SELENOHQ8IZQ5 122 aaKnown RBP11.38□□□□□ -0.59
CSPG4P11-201ENST00000560634 SMIM8Q96KF7 97 aa11.38□□□□□ -0.59
CSPG4P11-201ENST00000560634 GUCD1Q96NT3 240 aa11.38□□□□□ -0.59
CSPG4P11-201ENST00000560634 HIST1H4GQ99525 98 aa11.38□□□□□ -0.59
CSPG4P11-201ENST00000560634 DLL3Q9NYJ7 618 aa11.38□□□□□ -0.59
CSPG4P11-201ENST00000560634 MRPS16Q9Y3D3 137 aaKnown RBP11.38□□□□□ -0.59
CSPG4P11-201ENST00000560634 SCN1AP35498 2009 aa11.38□□□□□ -0.59
CSPG4P11-201ENST00000560634 A0A1W2PQF6 199 aa11.38□□□□□ -0.59
CSPG4P11-201ENST00000560634 DANCRP0C864 163 aa11.38□□□□□ -0.59
CSPG4P11-201ENST00000560634 KLK2P20151 261 aa11.38□□□□□ -0.59
CSPG4P11-201ENST00000560634 DNM1P46Q6ZS02 220 aa11.38□□□□□ -0.59
CSPG4P11-201ENST00000560634 PILRAQ9UKJ1 303 aa11.38□□□□□ -0.59
CSPG4P11-201ENST00000560634 CEP290O15078 2479 aa11.37□□□□□ -0.59
CSPG4P11-201ENST00000560634 TMEM177Q53S58 311 aa11.37□□□□□ -0.59
CSPG4P11-201ENST00000560634 RFLNBQ8N5W9 214 aa11.37□□□□□ -0.59
CSPG4P11-201ENST00000560634 JPT1Q9UK76 154 aa11.37□□□□□ -0.59
CSPG4P11-201ENST00000560634 RREB1Q92766 1687 aa11.37□□□□□ -0.59
CSPG4P11-201ENST00000560634 MPTX1A8MV57 137 aa11.37□□□□□ -0.59
CSPG4P11-201ENST00000560634 PRSS2P07478 247 aa11.37□□□□□ -0.59
CSPG4P11-201ENST00000560634 TRGC1P0CF51 173 aa11.37□□□□□ -0.59
CSPG4P11-201ENST00000560634 JOSD1Q15040 202 aaPredicted RBP11.37□□□□□ -0.59
CSPG4P11-201ENST00000560634 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.37□□□□□ -0.59
CSPG4P11-201ENST00000560634 OR8G5Q8NG78 346 aa11.37□□□□□ -0.59
CSPG4P11-201ENST00000560634 CCL21O00585 134 aa11.37□□□□□ -0.59
CSPG4P11-201ENST00000560634 NUDT3O95989 172 aa11.37□□□□□ -0.59
CSPG4P11-201ENST00000560634 UQCRFS1P47985 274 aa11.37□□□□□ -0.59
CSPG4P11-201ENST00000560634 HERPUD1Q15011 391 aa11.37□□□□□ -0.59
CSPG4P11-201ENST00000560634 GATAD1Q8WUU5 269 aa11.37□□□□□ -0.59
CSPG4P11-201ENST00000560634 PSMG3Q9BT73 122 aaPredicted RBP11.37□□□□□ -0.59
CSPG4P11-201ENST00000560634 MRPL32Q9BYC8 188 aaKnown RBP11.37□□□□□ -0.59
CSPG4P11-201ENST00000560634 CALYQ9NYX4 217 aa11.37□□□□□ -0.59
CSPG4P11-201ENST00000560634 PHLDA3Q9Y5J5 127 aa11.37□□□□□ -0.59
CSPG4P11-201ENST00000560634 ERVH48-1M5A8F1 160 aa11.37□□□□□ -0.59
CSPG4P11-201ENST00000560634 LEMD1Q68G75 181 aa11.37□□□□□ -0.59
CSPG4P11-201ENST00000560634 PRR7Q8TB68 274 aa11.37□□□□□ -0.59
CSPG4P11-201ENST00000560634 AMELYQ99218 206 aa11.37□□□□□ -0.59
CSPG4P11-201ENST00000560634 IDI2-AS1Q9NZ38 188 aa11.37□□□□□ -0.59
CSPG4P11-201ENST00000560634 MOB4Q9Y3A3 225 aa11.37□□□□□ -0.59
CSPG4P11-201ENST00000560634 STRCP1A6NGW2 1772 aa11.36□□□□□ -0.59
CSPG4P11-201ENST00000560634 AHCTF1Q8WYP5 2266 aa11.36□□□□□ -0.59
CSPG4P11-201ENST00000560634 IGHV4-34P06331 123 aa11.36□□□□□ -0.59
CSPG4P11-201ENST00000560634 PTGDSP41222 190 aa11.36□□□□□ -0.59
CSPG4P11-201ENST00000560634 NUBP1P53384 320 aa11.36□□□□□ -0.59
CSPG4P11-201ENST00000560634 HCP5Q6MZN7 132 aa11.36□□□□□ -0.59
CSPG4P11-201ENST00000560634 MS4A3Q96HJ5 214 aa11.36□□□□□ -0.59
CSPG4P11-201ENST00000560634 PAPPA2Q9BXP8 1791 aa11.36□□□□□ -0.59
CSPG4P11-201ENST00000560634 IL9P15248 144 aa11.36□□□□□ -0.59
CSPG4P11-201ENST00000560634 NHLRC3Q5JS37 347 aa11.36□□□□□ -0.59
CSPG4P11-201ENST00000560634 ITLN1Q8WWA0 313 aa11.36□□□□□ -0.59
CSPG4P11-201ENST00000560634 LGALS3P17931 250 aaKnown RBP11.36□□□□□ -0.59
CSPG4P11-201ENST00000560634 ANOS1P23352 680 aa11.36□□□□□ -0.59
CSPG4P11-201ENST00000560634 GLIPR1P48060 266 aa11.36□□□□□ -0.59
CSPG4P11-201ENST00000560634 EIF4EBP2Q13542 120 aaPredicted RBP11.36□□□□□ -0.59
CSPG4P11-201ENST00000560634 DDA1Q9BW61 102 aa11.36□□□□□ -0.59
CSPG4P11-201ENST00000560634 PRDM14Q9GZV8 571 aa11.36□□□□□ -0.59
CSPG4P11-201ENST00000560634 FSCN3Q9NQT6 498 aa11.36□□□□□ -0.59
CSPG4P11-201ENST00000560634 MARCH11A6NNE9 402 aa11.35□□□□□ -0.59
CSPG4P11-201ENST00000560634 J3QW42 95 aa11.35□□□□□ -0.59
CSPG4P11-201ENST00000560634 LMX1BO60663 402 aa11.35□□□□□ -0.59
CSPG4P11-201ENST00000560634 PF4V1P10720 104 aa11.35□□□□□ -0.59
CSPG4P11-201ENST00000560634 SRIP30626 198 aa11.35□□□□□ -0.59
CSPG4P11-201ENST00000560634 TAS2R60P59551 318 aa11.35□□□□□ -0.59
CSPG4P11-201ENST00000560634 RRN3P1Q2M238 152 aa11.35□□□□□ -0.59
CSPG4P11-201ENST00000560634 C2orf68Q2NKX9 166 aa11.35□□□□□ -0.59
CSPG4P11-201ENST00000560634 DNLZQ5SXM8 178 aa11.35□□□□□ -0.59
CSPG4P11-201ENST00000560634 RAXQ9Y2V3 346 aa11.35□□□□□ -0.59
CSPG4P11-201ENST00000560634 TRBV23-1A0A0A0MS06 115 aa11.35□□□□□ -0.59
CSPG4P11-201ENST00000560634 NPIPB13A6NJU9 1138 aa11.35□□□□□ -0.59
CSPG4P11-201ENST00000560634 NPIPB4C9JG80 1138 aa11.35□□□□□ -0.59
CSPG4P11-201ENST00000560634 UBE2L6O14933 153 aa11.35□□□□□ -0.59
CSPG4P11-201ENST00000560634 VENTXO95231 258 aa11.35□□□□□ -0.59
CSPG4P11-201ENST00000560634 TNFSF10P50591 281 aa11.35□□□□□ -0.59
CSPG4P11-201ENST00000560634 LAMTOR1Q6IAA8 161 aa11.35□□□□□ -0.59
CSPG4P11-201ENST00000560634 WNT2BQ93097 391 aa11.35□□□□□ -0.59
CSPG4P11-201ENST00000560634 Q96M66 194 aa11.35□□□□□ -0.59
CSPG4P11-201ENST00000560634 C5orf66Q9H5L9 145 aa11.35□□□□□ -0.59
CSPG4P11-201ENST00000560634 PQLC2LA1A4F0 135 aa11.35□□□□□ -0.59
CSPG4P11-201ENST00000560634 PRSS8Q16651 343 aa11.35□□□□□ -0.59
CSPG4P11-201ENST00000560634 PSMG4Q5JS54 123 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms