RNA–Protein interactions for RNA: ENST00000560369.5

LRRC49-223, Transcript of leucine rich repeat containing 49, human

APPRIS ALT1 TSL 2 BASIC

Gene LRRC49, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-223	ENST00000560369	C1orf229	Q6ZS94	237 aa	Predicted RBP	4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	SSX9	Q7RTT3	188 aa		4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	CMTM1	Q8IZ96	169 aa		4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	FAM185A	Q8N0U4	392 aa		4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	CLEC18C	Q8NCF0	446 aa		4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	OR8G5	Q8NG78	346 aa		4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	PLK3	Q9H4B4	646 aa		4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	OPA3	Q9H6K4	179 aa		4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	PLEKHF2	Q9H8W4	249 aa		4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	HES4	Q9HCC6	221 aa		4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	MBNL3	Q9NUK0	354 aa	Known RBP	4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	DUSP13	Q9UII6	198 aa		4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	FAM215A	Q9Y5M1	114 aa		4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	TRAV17	A0A0B4J275	112 aa		4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	LINC00473	A8K010	186 aa		4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	C1QTNF9B	B2RNN3	333 aa		4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	SEC14L6	B5MCN3	397 aa		4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	SH2D1B	O14796	132 aa		4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	PPP1R2P9	O14990	202 aa		4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	PROP1	O75360	226 aa		4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	SCAF4	O95104	1147 aa	Known RBP	4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	HBZ	P02008	142 aa		4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	SERPINE2	P07093	398 aa		4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	DEFA4	P12838	97 aa		4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	HIST1H1B	P16401	226 aa	Known RBP	4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	VAMP2	P63027	116 aa		4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	TGFBR3	Q03167	851 aa		4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	EDDM3A	Q14507	147 aa		4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	FAM180A	Q6UWF9	173 aa		4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	PRSS33	Q8NF86	280 aa		4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	OR2Z1	Q8NG97	314 aa		4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	LEAP2	Q969E1	77 aa		4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	SNX22	Q96L94	193 aa		4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	SSX3	Q99909	188 aa		4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	OR2D2	Q9H210	308 aa		4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	PLSCR4	Q9NRQ2	329 aa		4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	DCAF16	Q9NXF7	216 aa		4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	WIPI2	Q9Y4P8	454 aa		4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	WSB1	Q9Y6I7	421 aa		4.82	□□□□□ -1.64
LRRC49-223	ENST00000560369	ABCA4	P78363	2273 aa		4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	TPR	P12270	2363 aa	Known RBP	4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	PRR33	A8MZF0	331 aa		4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	ST8SIA5	O15466	376 aa		4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	S1PR2	O95136	353 aa		4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	KRAS	P01116	189 aa		4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	SNRPC	P09234	159 aa	Known RBP	4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	CTXN2	P0C2S0	81 aa		4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	DDT	P30046	118 aa		4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	GABRA2	P47869	451 aa		4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	FGF8	P55075	233 aa	Predicted RBP	4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	RPL23A	P62750	156 aa	Known RBP	4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	ZNF726P1	Q15940	193 aa		4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	LINC00596	Q86U02	117 aa		4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	THNSL2	Q86YJ6	484 aa		4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	ZNRF1	Q8ND25	227 aa		4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	RNASE11	Q8TAA1	199 aa	Known RBP	4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	SNRNP40	Q96DI7	357 aa	Known RBP	4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	TVP23C	Q96ET8	276 aa		4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	GNG13	Q9P2W3	67 aa		4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	ARHGAP32	A7KAX9	2087 aa		4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	IGKV1D-17	A0A075B6S4	117 aa		4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369		A0A087X0M5	115 aa		4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369		A0A1B0GX30	115 aa		4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	ZFP92	A6NM28	416 aa		4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369		M0R1B8	84 aa		4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	HMGB3	O15347	200 aa	Known RBP	4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	IGLV1-44	P01699	117 aa		4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	MMP9	P14780	707 aa		4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	RAB11A	P62491	216 aa		4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	FAM27E3	Q08E93	113 aa		4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	MRPL49	Q13405	166 aa	Known RBP	4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	EIF4EBP1	Q13541	118 aa	Predicted RBP	4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	CLEC12B	Q2HXU8	276 aa		4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	SP5	Q6BEB4	398 aa	Predicted RBP	4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	BHLHA15	Q7RTS1	189 aa	Predicted RBP	4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	ZCCHC24	Q8N2G6	241 aa	Known RBP	4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	LILRB2	Q8N423	598 aa		4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	RBMXL3	Q8N7X1	1067 aa	Known RBP	4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	LFNG	Q8NES3	379 aa		4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	LRRC29	Q8WV35	223 aa		4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	NIPSNAP3B	Q9BS92	247 aa		4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	FAM234A	Q9H0X4	552 aa		4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	RIMS4	Q9H426	269 aa	Predicted RBP	4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	CLN8	Q9UBY8	286 aa		4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	POLDIP2	Q9Y2S7	368 aa		4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	SLC25A15	Q9Y619	301 aa		4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	NAV3	Q8IVL0	2385 aa		4.81	□□□□□ -1.64
LRRC49-223	ENST00000560369	BTBD17	A6NE02	478 aa		4.8	□□□□□ -1.64
LRRC49-223	ENST00000560369	PHOX2A	O14813	284 aa		4.8	□□□□□ -1.64
LRRC49-223	ENST00000560369	SYNGR2	O43760	224 aa		4.8	□□□□□ -1.64
LRRC49-223	ENST00000560369	CEACAM4	O75871	244 aa		4.8	□□□□□ -1.64
LRRC49-223	ENST00000560369	ZNF134	P52741	427 aa		4.8	□□□□□ -1.64
LRRC49-223	ENST00000560369	SRPX	P78539	464 aa		4.8	□□□□□ -1.64
LRRC49-223	ENST00000560369	SPANXN5	Q5MJ07	72 aa		4.8	□□□□□ -1.64
LRRC49-223	ENST00000560369	BEND4	Q6ZU67	534 aa		4.8	□□□□□ -1.64
LRRC49-223	ENST00000560369	VKORC1L1	Q8N0U8	176 aa		4.8	□□□□□ -1.64
LRRC49-223	ENST00000560369	CLDND2	Q8NHS1	167 aa		4.8	□□□□□ -1.64
LRRC49-223	ENST00000560369	SARAF	Q96BY9	339 aa		4.8	□□□□□ -1.64
LRRC49-223	ENST00000560369	MISP3	Q96FF7	219 aa		4.8	□□□□□ -1.64
LRRC49-223	ENST00000560369	FAM210B	Q96KR6	192 aa		4.8	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms