RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 PIGTQ969N2 578 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 TSACCQ96A04 125 aaPredicted RBP5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 GPR146Q96CH1 333 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 BORCS8Q96FH0 119 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 THOC3Q96J01 351 aaKnown RBP5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 ZPBPQ9BS86 351 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 TMEM204Q9BSN7 226 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 ALKBH7Q9BT30 221 aaPredicted RBP5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 RSG1Q9BU20 258 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 TMEM147Q9BVK8 224 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 ELOVL1Q9BW60 279 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 BET1LQ9NYM9 111 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 ST3GAL6Q9Y274 331 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 LAMTOR2Q9Y2Q5 125 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 KMT2EQ8IZD2 1858 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 DOCK9Q9BZ29 2069 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 IGHV2-26A0A0B4J1V2 119 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 IGHV2OR16-5A0A0B4J2B6 119 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 IGHV1-69-2A0A0G2JMI3 117 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 SLC22A20A6NK97 555 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 CD300LBA8K4G0 201 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 C10orf142B7Z368 130 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 HSBP1L1C9JCN9 74 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 C17orf112F2Z3M2 114 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 M0R135 149 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 SIRPB1O00241 398 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 SLC33A1O00400 549 aaPredicted RBP5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 RER1O15258 196 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 SLC31A1O15431 190 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 DHHO43323 396 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 ZNF253O75346 499 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 CBR3O75828 277 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 OR2J2O76002 312 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 NXPH2O95156 264 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 NAPSAO96009 420 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 FSHBP01225 129 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 IGLC2P0DOY2 106 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 IGLC3P0DOY3 106 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 FGF8P55075 233 aaPredicted RBP5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 OR1D5P58170 312 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 ARF6P62330 175 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 RHOBP62745 196 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 RHOGP84095 191 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 SLC38A11Q08AI6 406 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 TMEM267Q0VDI3 215 aaPredicted RBP5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 MFAP5Q13361 173 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 TRA2AQ13595 282 aaKnown RBP eCLIP5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 FHL3Q13643 280 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 VWC2Q2TAL6 325 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 KRTAP27-1Q3LI81 207 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 SPATA45Q537H7 98 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 SPIN3Q5JUX0 258 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 WDR73Q6P4I2 378 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 ZNF818PQ6ZRF7 136 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 PRSS58Q8IYP2 241 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 GAPTQ8N292 157 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 RPP25LQ8N5L8 163 aaKnown RBP5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 Q8N976 141 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 OR5T1Q8NG75 326 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 OR4F5Q8NH21 305 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 NABP1Q96AH0 204 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 SMIM12Q96EX1 92 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 ZNF799Q96GE5 643 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 SFRP2Q96HF1 295 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 CYYR1Q96J86 154 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 OR4F4Q96R69 305 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 HSPB9Q9BQS6 159 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 GNB1LQ9BYB4 327 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 VSIRQ9H7M9 311 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 ZDHHC11Q9H8X9 412 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 SLC7A10Q9NS82 523 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 SLC35D1Q9NTN3 355 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 IL36BQ9NZH7 164 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 ZNF581Q9P0T4 197 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 TP53TG3Q9ULZ0 132 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 PAM16Q9Y3D7 125 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 ARL2-SNX15V9GYD0 113 aa5.02□□□□□ -1.61
SNRPA1-209ENST00000560307 C9JCJ5 164 aa5.01□□□□□ -1.61
SNRPA1-209ENST00000560307 DIRC3C9JPN6 131 aa5.01□□□□□ -1.61
SNRPA1-209ENST00000560307 J3QR06 171 aa5.01□□□□□ -1.61
SNRPA1-209ENST00000560307 TNFSF11O14788 317 aa5.01□□□□□ -1.61
SNRPA1-209ENST00000560307 CCL25O15444 150 aa5.01□□□□□ -1.61
SNRPA1-209ENST00000560307 CIDEAO60543 219 aa5.01□□□□□ -1.61
SNRPA1-209ENST00000560307 HYPMO75409 117 aa5.01□□□□□ -1.61
SNRPA1-209ENST00000560307 PGLYRP1O75594 196 aaPredicted RBP5.01□□□□□ -1.61
SNRPA1-209ENST00000560307 SERF1AO75920 110 aa5.01□□□□□ -1.61
SNRPA1-209ENST00000560307 VAMP5O95183 116 aa5.01□□□□□ -1.61
SNRPA1-209ENST00000560307 SERPINE2P07093 398 aa5.01□□□□□ -1.61
SNRPA1-209ENST00000560307 KITLGP21583 273 aa5.01□□□□□ -1.61
SNRPA1-209ENST00000560307 CRYGSP22914 178 aa5.01□□□□□ -1.61
SNRPA1-209ENST00000560307 WNT5AP41221 380 aa5.01□□□□□ -1.61
SNRPA1-209ENST00000560307 CAPZBP47756 277 aa5.01□□□□□ -1.61
SNRPA1-209ENST00000560307 FASLGP48023 281 aa5.01□□□□□ -1.61
SNRPA1-209ENST00000560307 PPP1CAP62136 330 aa5.01□□□□□ -1.61
SNRPA1-209ENST00000560307 MYBPHQ13203 477 aa5.01□□□□□ -1.61
SNRPA1-209ENST00000560307 TRIP6Q15654 476 aaKnown RBP5.01□□□□□ -1.61
SNRPA1-209ENST00000560307 CST9LP1Q5W188 147 aa5.01□□□□□ -1.61
SNRPA1-209ENST00000560307 RHBDD2Q6NTF9 364 aa5.01□□□□□ -1.61
SNRPA1-209ENST00000560307 CCDC144NLQ6NUI1 221 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms