RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 SPAG16Q8N0X2 631 aa14.08□□□□□ -0.16
CHRNA3-206ENST00000559658 LGI3Q8N145 548 aa14.08□□□□□ -0.16
CHRNA3-206ENST00000559658 LINC00311Q8N616 119 aa14.08□□□□□ -0.16
CHRNA3-206ENST00000559658 ST6GALNAC6Q969X2 333 aa14.08□□□□□ -0.16
CHRNA3-206ENST00000559658 MBD6Q96DN6 1003 aa14.08□□□□□ -0.16
CHRNA3-206ENST00000559658 TBX15Q96SF7 602 aa14.08□□□□□ -0.16
CHRNA3-206ENST00000559658 RAB18Q9NP72 206 aa14.08□□□□□ -0.16
CHRNA3-206ENST00000559658 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.07□□□□□ -0.16
CHRNA3-206ENST00000559658 ZFHX3Q15911 3703 aa14.07□□□□□ -0.16
CHRNA3-206ENST00000559658 C5orf51A6NDU8 294 aa14.07□□□□□ -0.16
CHRNA3-206ENST00000559658 CT45A6P0DMU7 189 aa14.07□□□□□ -0.16
CHRNA3-206ENST00000559658 CT45A5P0DMU8 189 aa14.07□□□□□ -0.16
CHRNA3-206ENST00000559658 CT45A7P0DMV0 189 aa14.07□□□□□ -0.16
CHRNA3-206ENST00000559658 SLC25A16P16260 332 aa14.07□□□□□ -0.16
CHRNA3-206ENST00000559658 HLA-GP17693 338 aa14.07□□□□□ -0.16
CHRNA3-206ENST00000559658 KIR3DL3Q8N743 410 aa14.07□□□□□ -0.16
CHRNA3-206ENST00000559658 C8orf31Q8N9H6 132 aa14.07□□□□□ -0.16
CHRNA3-206ENST00000559658 OR11H4Q8NGC9 324 aa14.07□□□□□ -0.16
CHRNA3-206ENST00000559658 OR2T35Q8NGX2 323 aa14.07□□□□□ -0.16
CHRNA3-206ENST00000559658 Q96MF0 132 aa14.07□□□□□ -0.16
CHRNA3-206ENST00000559658 HSD17B10Q99714 261 aaKnown RBP14.07□□□□□ -0.16
CHRNA3-206ENST00000559658 AKAP9Q99996 3911 aa14.07□□□□□ -0.16
CHRNA3-206ENST00000559658 FCGR3BO75015 233 aa14.06□□□□□ -0.16
CHRNA3-206ENST00000559658 IGKV1-5P01602 117 aa14.06□□□□□ -0.16
CHRNA3-206ENST00000559658 SERPINE2P07093 398 aa14.06□□□□□ -0.16
CHRNA3-206ENST00000559658 GIPP09681 153 aaPredicted RBP14.06□□□□□ -0.16
CHRNA3-206ENST00000559658 PRTN3P24158 256 aa14.06□□□□□ -0.16
CHRNA3-206ENST00000559658 DVL1P1P54792 670 aaPredicted RBP14.06□□□□□ -0.16
CHRNA3-206ENST00000559658 C11orf91Q3C1V1 193 aa14.06□□□□□ -0.16
CHRNA3-206ENST00000559658 LRRC37A5PQ49AS3 106 aa14.06□□□□□ -0.16
CHRNA3-206ENST00000559658 ZNF66Q6ZN08 573 aa14.06□□□□□ -0.16
CHRNA3-206ENST00000559658 ZNF695Q8IW36 515 aa14.06□□□□□ -0.16
CHRNA3-206ENST00000559658 FAM216AQ8WUB2 273 aa14.06□□□□□ -0.16
CHRNA3-206ENST00000559658 POLR3KQ9Y2Y1 108 aaPredicted RBP14.06□□□□□ -0.16
CHRNA3-206ENST00000559658 INSIG2Q9Y5U4 225 aa14.06□□□□□ -0.16
CHRNA3-206ENST00000559658 LPAR6P43657 344 aa14.06□□□□□ -0.16
CHRNA3-206ENST00000559658 CATR1Q13166 79 aa14.06□□□□□ -0.16
CHRNA3-206ENST00000559658 LHFPL4Q7Z7J7 247 aa14.06□□□□□ -0.16
CHRNA3-206ENST00000559658 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.06□□□□□ -0.16
CHRNA3-206ENST00000559658 WFDC11Q8NEX6 87 aa14.06□□□□□ -0.16
CHRNA3-206ENST00000559658 C17orf50Q8WW18 174 aa14.06□□□□□ -0.16
CHRNA3-206ENST00000559658 RBPMSQ93062 196 aaKnown RBP14.06□□□□□ -0.16
CHRNA3-206ENST00000559658 PDCD10Q9BUL8 212 aa14.06□□□□□ -0.16
CHRNA3-206ENST00000559658 GAB2Q9UQC2 676 aa14.06□□□□□ -0.16
CHRNA3-206ENST00000559658 KPTNQ9Y664 436 aa14.06□□□□□ -0.16
CHRNA3-206ENST00000559658 CREBBPQ92793 2442 aa14.05□□□□□ -0.16
CHRNA3-206ENST00000559658 TRAV14DV4A0A0A6YYC5 116 aa14.05□□□□□ -0.16
CHRNA3-206ENST00000559658 hCG_1809904A0A1W2PP81 198 aa14.05□□□□□ -0.16
CHRNA3-206ENST00000559658 A0A1W2PPE2 198 aa14.05□□□□□ -0.16
CHRNA3-206ENST00000559658 A0A1W2PR64 198 aa14.05□□□□□ -0.16
CHRNA3-206ENST00000559658 A0A1W2PRV1 198 aa14.05□□□□□ -0.16
CHRNA3-206ENST00000559658 RNF212BA8MTL3 300 aa14.05□□□□□ -0.16
CHRNA3-206ENST00000559658 TOR1AO14656 332 aa14.05□□□□□ -0.16
CHRNA3-206ENST00000559658 TOX4O94842 621 aa14.05□□□□□ -0.16
CHRNA3-206ENST00000559658 ODF3BA8MYP8 253 aa14.04□□□□□ -0.16
CHRNA3-206ENST00000559658 BUB1B-PAK6H3BSN5 160 aa14.04□□□□□ -0.16
CHRNA3-206ENST00000559658 IGKV1-16P04430 117 aa14.04□□□□□ -0.16
CHRNA3-206ENST00000559658 ARG1P05089 322 aa14.04□□□□□ -0.16
CHRNA3-206ENST00000559658 G6PCP35575 357 aa14.04□□□□□ -0.16
CHRNA3-206ENST00000559658 ZNF137PP52743 207 aa14.04□□□□□ -0.16
CHRNA3-206ENST00000559658 NMSQ5H8A3 153 aa14.04□□□□□ -0.16
CHRNA3-206ENST00000559658 GSG1LQ6UXU4 331 aa14.04□□□□□ -0.16
CHRNA3-206ENST00000559658 VKORC1L1Q8N0U8 176 aa14.04□□□□□ -0.16
CHRNA3-206ENST00000559658 GRPEL2Q8TAA5 225 aa14.04□□□□□ -0.16
CHRNA3-206ENST00000559658 FLNAP21333 2647 aaKnown RBP14.04□□□□□ -0.16
CHRNA3-206ENST00000559658 NXPH3O95157 252 aa14.04□□□□□ -0.16
CHRNA3-206ENST00000559658 MSMBP08118 114 aa14.04□□□□□ -0.16
CHRNA3-206ENST00000559658 EPHA1P21709 976 aa14.04□□□□□ -0.16
CHRNA3-206ENST00000559658 EIF2B2P49770 351 aaKnown RBP14.04□□□□□ -0.16
CHRNA3-206ENST00000559658 SRSF4Q08170 494 aaKnown RBP14.04□□□□□ -0.16
CHRNA3-206ENST00000559658 IAH1Q2TAA2 248 aaPredicted RBP14.04□□□□□ -0.16
CHRNA3-206ENST00000559658 ZFP69Q49AA0 526 aa14.04□□□□□ -0.16
CHRNA3-206ENST00000559658 Q6ZRM9 215 aa14.04□□□□□ -0.16
CHRNA3-206ENST00000559658 BEND2Q8NDZ0 799 aa14.04□□□□□ -0.16
CHRNA3-206ENST00000559658 OR11H6Q8NGC7 330 aa14.04□□□□□ -0.16
CHRNA3-206ENST00000559658 LHX4Q969G2 390 aa14.04□□□□□ -0.16
CHRNA3-206ENST00000559658 S1PR3Q99500 378 aa14.04□□□□□ -0.16
CHRNA3-206ENST00000559658 GSKIPQ9P0R6 139 aa14.04□□□□□ -0.16
CHRNA3-206ENST00000559658 IGHV3-72A0A0B4J1Y9 119 aa14.03□□□□□ -0.16
CHRNA3-206ENST00000559658 SRPXP78539 464 aa14.03□□□□□ -0.16
CHRNA3-206ENST00000559658 OR13D1Q8NGV5 346 aa14.03□□□□□ -0.16
CHRNA3-206ENST00000559658 PPP1R1CQ8WVI7 109 aa14.03□□□□□ -0.16
CHRNA3-206ENST00000559658 NABP2Q9BQ15 211 aa14.03□□□□□ -0.16
CHRNA3-206ENST00000559658 REG4Q9BYZ8 158 aa14.03□□□□□ -0.16
CHRNA3-206ENST00000559658 UNKLQ9H9P5 680 aaKnown RBP14.03□□□□□ -0.16
CHRNA3-206ENST00000559658 IGHV3OR16-10A0A075B7F0 116 aa14.02□□□□□ -0.16
CHRNA3-206ENST00000559658 LY6LH3BQJ8 138 aa14.02□□□□□ -0.16
CHRNA3-206ENST00000559658 CRYZL1O95825 349 aa14.02□□□□□ -0.16
CHRNA3-206ENST00000559658 KRASP01116 189 aa14.02□□□□□ -0.16
CHRNA3-206ENST00000559658 RAP2BP61225 183 aa14.02□□□□□ -0.16
CHRNA3-206ENST00000559658 PAX8Q06710 450 aa14.02□□□□□ -0.16
CHRNA3-206ENST00000559658 IL15RAQ13261 267 aa14.02□□□□□ -0.16
CHRNA3-206ENST00000559658 C1orf122Q6ZSJ8 110 aa14.02□□□□□ -0.16
CHRNA3-206ENST00000559658 DYNAPQ8N1N2 210 aa14.02□□□□□ -0.16
CHRNA3-206ENST00000559658 CIARTQ8N365 385 aaPredicted RBP14.02□□□□□ -0.16
CHRNA3-206ENST00000559658 TMEM186Q96B77 213 aa14.02□□□□□ -0.16
CHRNA3-206ENST00000559658 GPR146Q96CH1 333 aa14.02□□□□□ -0.16
CHRNA3-206ENST00000559658 H0YJW9 148 aa14.01□□□□□ -0.17
CHRNA3-206ENST00000559658 KCNAB3O43448 404 aa14.01□□□□□ -0.17
CHRNA3-206ENST00000559658 C1QBP02746 253 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms