RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 KLF5Q13887 457 aaPredicted RBP10□□□□□ -0.81
TPM1-220ENST00000559556 FXYD3Q14802 87 aa10□□□□□ -0.81
TPM1-220ENST00000559556 FAM89BQ8N5H3 189 aa10□□□□□ -0.81
TPM1-220ENST00000559556 OR6M1Q8NGM8 313 aa10□□□□□ -0.81
TPM1-220ENST00000559556 SPATA25Q9BR10 227 aa10□□□□□ -0.81
TPM1-220ENST00000559556 THAP7Q9BT49 309 aaPredicted RBP10□□□□□ -0.81
TPM1-220ENST00000559556 C12orf4Q9NQ89 552 aa10□□□□□ -0.81
TPM1-220ENST00000559556 HSF4Q9ULV5 492 aa10□□□□□ -0.81
TPM1-220ENST00000559556 BRI3O95415 125 aa9.99□□□□□ -0.81
TPM1-220ENST00000559556 UCHL1P09936 223 aa9.99□□□□□ -0.81
TPM1-220ENST00000559556 SRMP19623 302 aa9.99□□□□□ -0.81
TPM1-220ENST00000559556 HSPA13P48723 471 aa9.99□□□□□ -0.81
TPM1-220ENST00000559556 LINC00205P59089 165 aa9.99□□□□□ -0.81
TPM1-220ENST00000559556 RPS16P62249 146 aaKnown RBP9.99□□□□□ -0.81
TPM1-220ENST00000559556 HSD17B12Q53GQ0 312 aa9.99□□□□□ -0.81
TPM1-220ENST00000559556 RNLSQ5VYX0 342 aa9.99□□□□□ -0.81
TPM1-220ENST00000559556 IL34Q6ZMJ4 242 aa9.99□□□□□ -0.81
TPM1-220ENST00000559556 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.99□□□□□ -0.81
TPM1-220ENST00000559556 OR9G4Q8NGQ1 327 aa9.99□□□□□ -0.81
TPM1-220ENST00000559556 TMED9Q9BVK6 235 aa9.99□□□□□ -0.81
TPM1-220ENST00000559556 MND1Q9BWT6 205 aa9.99□□□□□ -0.81
TPM1-220ENST00000559556 Q9N2K0 584 aa9.99□□□□□ -0.81
TPM1-220ENST00000559556 ZNF355PQ9NSJ1 428 aa9.99□□□□□ -0.81
TPM1-220ENST00000559556 ZNF221Q9UK13 617 aa9.99□□□□□ -0.81
TPM1-220ENST00000559556 LSM2Q9Y333 95 aaKnown RBP9.99□□□□□ -0.81
TPM1-220ENST00000559556 IGKV1-6A0A0C4DH72 117 aa9.98□□□□□ -0.81
TPM1-220ENST00000559556 H0Y980 276 aa9.98□□□□□ -0.81
TPM1-220ENST00000559556 IGLV2-23P01705 113 aa9.98□□□□□ -0.81
TPM1-220ENST00000559556 SCTP09683 121 aa9.98□□□□□ -0.81
TPM1-220ENST00000559556 ARSBP15848 533 aa9.98□□□□□ -0.81
TPM1-220ENST00000559556 PJVKQ0ZLH3 352 aa9.98□□□□□ -0.81
TPM1-220ENST00000559556 HAGHQ16775 308 aa9.98□□□□□ -0.81
TPM1-220ENST00000559556 BPIFB6Q8NFQ5 453 aa9.98□□□□□ -0.81
TPM1-220ENST00000559556 TMEM68Q96MH6 324 aa9.98□□□□□ -0.81
TPM1-220ENST00000559556 URM1Q9BTM9 101 aaKnown RBP9.98□□□□□ -0.81
TPM1-220ENST00000559556 TINAGL1Q9GZM7 467 aaPredicted RBP9.98□□□□□ -0.81
TPM1-220ENST00000559556 SLC35D1Q9NTN3 355 aa9.98□□□□□ -0.81
TPM1-220ENST00000559556 SIGLEC8Q9NYZ4 499 aa9.98□□□□□ -0.81
TPM1-220ENST00000559556 KMT2AQ03164 3969 aa9.97□□□□□ -0.81
TPM1-220ENST00000559556 ANKRD34BA5PLL1 514 aa9.97□□□□□ -0.81
TPM1-220ENST00000559556 M0R1X1 148 aa9.97□□□□□ -0.81
TPM1-220ENST00000559556 SLC17A2O00624 439 aa9.97□□□□□ -0.81
TPM1-220ENST00000559556 CNIH1O95406 144 aa9.97□□□□□ -0.81
TPM1-220ENST00000559556 CDK1P06493 297 aa9.97□□□□□ -0.81
TPM1-220ENST00000559556 CRYGBP07316 175 aa9.97□□□□□ -0.81
TPM1-220ENST00000559556 AADACP22760 399 aa9.97□□□□□ -0.81
TPM1-220ENST00000559556 TMEM50BP56557 158 aa9.97□□□□□ -0.81
TPM1-220ENST00000559556 SYNJ2BPP57105 145 aa9.97□□□□□ -0.81
TPM1-220ENST00000559556 LCN12Q6JVE5 192 aa9.97□□□□□ -0.81
TPM1-220ENST00000559556 ZNF343Q6P1L6 599 aa9.97□□□□□ -0.81
TPM1-220ENST00000559556 CEACAM19Q7Z692 300 aa9.97□□□□□ -0.81
TPM1-220ENST00000559556 OR5T1Q8NG75 326 aa9.97□□□□□ -0.81
TPM1-220ENST00000559556 NRG4Q8WWG1 115 aa9.97□□□□□ -0.81
TPM1-220ENST00000559556 ARHGAP5-AS1Q96IT6 56 aa9.97□□□□□ -0.81
TPM1-220ENST00000559556 GFI1Q99684 422 aa9.97□□□□□ -0.81
TPM1-220ENST00000559556 RDH8Q9NYR8 311 aa9.97□□□□□ -0.81
TPM1-220ENST00000559556 TRBV12-3P01733 135 aa9.96□□□□□ -0.82
TPM1-220ENST00000559556 LGALS7P47929 136 aa9.96□□□□□ -0.82
TPM1-220ENST00000559556 DEFA5Q01523 94 aa9.96□□□□□ -0.82
TPM1-220ENST00000559556 DYRK1AQ13627 763 aa9.96□□□□□ -0.82
TPM1-220ENST00000559556 P2RY14Q15391 338 aa9.96□□□□□ -0.82
TPM1-220ENST00000559556 SPHARQ15513 63 aa9.96□□□□□ -0.82
TPM1-220ENST00000559556 ADAMTSL5Q6ZMM2 481 aa9.96□□□□□ -0.82
TPM1-220ENST00000559556 GTSCR1Q86UQ5 136 aa9.96□□□□□ -0.82
TPM1-220ENST00000559556 Q8N402 240 aa9.96□□□□□ -0.82
TPM1-220ENST00000559556 HARBI1Q96MB7 349 aa9.96□□□□□ -0.82
TPM1-220ENST00000559556 CMSS1Q9BQ75 279 aaKnown RBP9.96□□□□□ -0.82
TPM1-220ENST00000559556 PECRQ9BY49 303 aa9.96□□□□□ -0.82
TPM1-220ENST00000559556 Q9H521 79 aa9.96□□□□□ -0.82
TPM1-220ENST00000559556 PLGRKTQ9HBL7 147 aa9.96□□□□□ -0.82
TPM1-220ENST00000559556 PEF1Q9UBV8 284 aaKnown RBP9.96□□□□□ -0.82
TPM1-220ENST00000559556 ADAM30Q9UKF2 790 aa9.96□□□□□ -0.82
TPM1-220ENST00000559556 TRDCB7Z8K6 153 aa9.95□□□□□ -0.82
TPM1-220ENST00000559556 OR2A4O95047 310 aa9.95□□□□□ -0.82
TPM1-220ENST00000559556 IFNA6P05013 189 aa9.95□□□□□ -0.82
TPM1-220ENST00000559556 CSN3P07498 182 aa9.95□□□□□ -0.82
TPM1-220ENST00000559556 SERPINB10P48595 397 aa9.95□□□□□ -0.82
TPM1-220ENST00000559556 TAGLNQ01995 201 aaKnown RBP9.95□□□□□ -0.82
TPM1-220ENST00000559556 MRGPRG-AS1Q2M3A8 158 aa9.95□□□□□ -0.82
TPM1-220ENST00000559556 TMEM177Q53S58 311 aa9.95□□□□□ -0.82
TPM1-220ENST00000559556 IZUMO2Q6UXV1 221 aa9.95□□□□□ -0.82
TPM1-220ENST00000559556 BVESQ8NE79 360 aa9.95□□□□□ -0.82
TPM1-220ENST00000559556 OR4A4PQ8NGN8 299 aa9.95□□□□□ -0.82
TPM1-220ENST00000559556 USMG5Q96IX5 58 aa9.95□□□□□ -0.82
TPM1-220ENST00000559556 CABLES2Q9BTV7 478 aa9.95□□□□□ -0.82
TPM1-220ENST00000559556 OR2D2Q9H210 308 aa9.95□□□□□ -0.82
TPM1-220ENST00000559556 SDHAF2Q9NX18 166 aa9.95□□□□□ -0.82
TPM1-220ENST00000559556 IZUMO1RA6ND01 250 aa9.94□□□□□ -0.82
TPM1-220ENST00000559556 RBMXL2O75526 392 aaKnown RBP9.94□□□□□ -0.82
TPM1-220ENST00000559556 DIRAS3O95661 229 aa9.94□□□□□ -0.82
TPM1-220ENST00000559556 MED22Q15528 200 aa9.94□□□□□ -0.82
TPM1-220ENST00000559556 RAB11BQ15907 218 aa9.94□□□□□ -0.82
TPM1-220ENST00000559556 RPEL1Q2QD12 228 aa9.94□□□□□ -0.82
TPM1-220ENST00000559556 PLAC9Q5JTB6 97 aa9.94□□□□□ -0.82
TPM1-220ENST00000559556 LIPKQ5VXJ0 399 aa9.94□□□□□ -0.82
TPM1-220ENST00000559556 TMEM91Q6ZNR0 172 aa9.94□□□□□ -0.82
TPM1-220ENST00000559556 ADAD2Q8NCV1 583 aaKnown RBP9.94□□□□□ -0.82
TPM1-220ENST00000559556 OR56B1Q8NGI3 324 aa9.94□□□□□ -0.82
TPM1-220ENST00000559556 OR2K2Q8NGT1 345 aa9.94□□□□□ -0.82
TPM1-220ENST00000559556 C5orf30Q96GV9 206 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms