RNA–Protein interactions for RNA: ENST00000559329.5

USP8-208, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,917 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-208ENST00000559329 RBPJQ06330 500 aa13.19□□□□□ -0.3
USP8-208ENST00000559329 PEA15Q15121 130 aa13.19□□□□□ -0.3
USP8-208ENST00000559329 AARDQ4LEZ3 155 aa13.19□□□□□ -0.3
USP8-208ENST00000559329 DPPA3Q6W0C5 159 aa13.19□□□□□ -0.3
USP8-208ENST00000559329 LINC00574Q9H8X3 128 aa13.19□□□□□ -0.3
USP8-208ENST00000559329 DCAF16Q9NXF7 216 aa13.19□□□□□ -0.3
USP8-208ENST00000559329 TLN1Q9Y490 2541 aaKnown RBP13.18□□□□□ -0.3
USP8-208ENST00000559329 KBTBD11-OT1A0A1B0GTJ5 212 aa13.18□□□□□ -0.3
USP8-208ENST00000559329 MARCH11A6NNE9 402 aa13.18□□□□□ -0.3
USP8-208ENST00000559329 IFNA5P01569 189 aa13.18□□□□□ -0.3
USP8-208ENST00000559329 OR8U8P0C7N1 319 aa13.18□□□□□ -0.3
USP8-208ENST00000559329 HBG1P69891 147 aa13.18□□□□□ -0.3
USP8-208ENST00000559329 HBG2P69892 147 aa13.18□□□□□ -0.3
USP8-208ENST00000559329 SPANXN5Q5MJ07 72 aa13.18□□□□□ -0.3
USP8-208ENST00000559329 UTF1Q5T230 341 aa13.18□□□□□ -0.3
USP8-208ENST00000559329 DHRS7BQ6IAN0 325 aaPredicted RBP13.18□□□□□ -0.3
USP8-208ENST00000559329 PLPPR2Q96GM1 343 aa13.18□□□□□ -0.3
USP8-208ENST00000559329 VKORC1Q9BQB6 163 aa13.18□□□□□ -0.3
USP8-208ENST00000559329 ZNF665Q9H7R5 613 aa13.18□□□□□ -0.3
USP8-208ENST00000559329 GFOD1Q9NXC2 390 aa13.18□□□□□ -0.3
USP8-208ENST00000559329 CLN8Q9UBY8 286 aa13.18□□□□□ -0.3
USP8-208ENST00000559329 NBEAQ8NFP9 2946 aa13.18□□□□□ -0.3
USP8-208ENST00000559329 BTBD17A6NE02 478 aa13.17□□□□□ -0.3
USP8-208ENST00000559329 RBFOX2O43251 390 aaKnown RBP eCLIP13.17□□□□□ -0.3
USP8-208ENST00000559329 GFRA3O60609 400 aa13.17□□□□□ -0.3
USP8-208ENST00000559329 DYSFO75923 2080 aa13.17□□□□□ -0.3
USP8-208ENST00000559329 TNFRSF1AP19438 455 aa13.17□□□□□ -0.3
USP8-208ENST00000559329 H2BFWTQ7Z2G1 175 aa13.17□□□□□ -0.3
USP8-208ENST00000559329 RND1Q92730 232 aa13.17□□□□□ -0.3
USP8-208ENST00000559329 WFIKKN1Q96NZ8 548 aa13.17□□□□□ -0.3
USP8-208ENST00000559329 OR4C12Q96R67 309 aa13.17□□□□□ -0.3
USP8-208ENST00000559329 CCL13Q99616 98 aa13.17□□□□□ -0.3
USP8-208ENST00000559329 PSMG3Q9BT73 122 aaPredicted RBP13.17□□□□□ -0.3
USP8-208ENST00000559329 RAB9BQ9NP90 201 aa13.17□□□□□ -0.3
USP8-208ENST00000559329 KPTNQ9Y664 436 aa13.17□□□□□ -0.3
USP8-208ENST00000559329 TANC2Q9HCD6 1990 aa13.17□□□□□ -0.3
USP8-208ENST00000559329 SLC31A2O15432 143 aa13.17□□□□□ -0.3
USP8-208ENST00000559329 GYPAP02724 150 aa13.17□□□□□ -0.3
USP8-208ENST00000559329 PPT1P50897 306 aa13.17□□□□□ -0.3
USP8-208ENST00000559329 CCL20P78556 96 aa13.17□□□□□ -0.3
USP8-208ENST00000559329 LRRC75BQ2VPJ9 315 aa13.17□□□□□ -0.3
USP8-208ENST00000559329 RPL39P5Q59GN2 51 aa13.17□□□□□ -0.3
USP8-208ENST00000559329 THNSL2Q86YJ6 484 aa13.17□□□□□ -0.3
USP8-208ENST00000559329 FAM216BQ8N7L0 139 aa13.17□□□□□ -0.3
USP8-208ENST00000559329 DEFB108BQ8NET1 73 aa13.17□□□□□ -0.3
USP8-208ENST00000559329 DDB2Q92466 427 aa13.17□□□□□ -0.3
USP8-208ENST00000559329 CORO2AQ92828 525 aa13.17□□□□□ -0.3
USP8-208ENST00000559329 ICE1Q9Y2F5 2266 aa13.16□□□□□ -0.3
USP8-208ENST00000559329 TRGV10A0A0A0MS01 117 aa13.16□□□□□ -0.3
USP8-208ENST00000559329 FAM90A9PA6NNJ1 464 aa13.16□□□□□ -0.3
USP8-208ENST00000559329 PMS2P5A8MQ11 134 aa13.16□□□□□ -0.3
USP8-208ENST00000559329 M0R1X1 148 aa13.16□□□□□ -0.3
USP8-208ENST00000559329 GPR37O15354 613 aa13.16□□□□□ -0.3
USP8-208ENST00000559329 HPRT1P00492 218 aa13.16□□□□□ -0.3
USP8-208ENST00000559329 H2AFB1P0C5Y9 115 aa13.16□□□□□ -0.3
USP8-208ENST00000559329 IRF2P14316 349 aa13.16□□□□□ -0.3
USP8-208ENST00000559329 RAB7AP51149 207 aa13.16□□□□□ -0.3
USP8-208ENST00000559329 CCL8P80075 99 aa13.16□□□□□ -0.3
USP8-208ENST00000559329 AKR1C8PQ5T2L2 129 aa13.16□□□□□ -0.3
USP8-208ENST00000559329 ADAM5Q6NVV9 412 aa13.16□□□□□ -0.3
USP8-208ENST00000559329 C1orf229Q6ZS94 237 aaPredicted RBP13.16□□□□□ -0.3
USP8-208ENST00000559329 ZNF439Q8NDP4 499 aa13.16□□□□□ -0.3
USP8-208ENST00000559329 R3HDM4Q96D70 268 aa13.16□□□□□ -0.3
USP8-208ENST00000559329 PBDC1Q9BVG4 233 aa13.16□□□□□ -0.3
USP8-208ENST00000559329 FBXO7Q9Y3I1 522 aa13.16□□□□□ -0.3
USP8-208ENST00000559329 DIDO1Q9BTC0 2240 aaKnown RBP13.16□□□□□ -0.3
USP8-208ENST00000559329 UCNP55089 124 aa13.15□□□□□ -0.3
USP8-208ENST00000559329 SLC38A11Q08AI6 406 aa13.15□□□□□ -0.3
USP8-208ENST00000559329 CT45A1Q5HYN5 189 aa13.15□□□□□ -0.3
USP8-208ENST00000559329 DMRTC2Q8IXT2 367 aaPredicted RBP13.15□□□□□ -0.3
USP8-208ENST00000559329 CLRN3Q8NCR9 226 aa13.15□□□□□ -0.3
USP8-208ENST00000559329 CT45A3Q8NHU0 189 aa13.15□□□□□ -0.3
USP8-208ENST00000559329 DTD1Q8TEA8 209 aa13.15□□□□□ -0.3
USP8-208ENST00000559329 RSG1Q9BU20 258 aa13.15□□□□□ -0.3
USP8-208ENST00000559329 WDR61Q9GZS3 305 aaKnown RBP13.15□□□□□ -0.3
USP8-208ENST00000559329 EIF5A2Q9GZV4 153 aaKnown RBP13.15□□□□□ -0.3
USP8-208ENST00000559329 SMDT1Q9H4I9 107 aa13.15□□□□□ -0.3
USP8-208ENST00000559329 KIAA1456Q9P272 454 aa13.15□□□□□ -0.3
USP8-208ENST00000559329 TRAV1-1A0A0B4J248 108 aa13.15□□□□□ -0.3
USP8-208ENST00000559329 ZNF729A6NN14 1252 aaPredicted RBP13.15□□□□□ -0.3
USP8-208ENST00000559329 ATXN7O15265 892 aaPredicted RBP13.15□□□□□ -0.3
USP8-208ENST00000559329 ZG16O60844 167 aa13.15□□□□□ -0.3
USP8-208ENST00000559329 FCGR3BO75015 233 aa13.15□□□□□ -0.3
USP8-208ENST00000559329 TMEM88Q6PEY1 159 aa13.15□□□□□ -0.3
USP8-208ENST00000559329 CBLN2Q8IUK8 224 aa13.15□□□□□ -0.3
USP8-208ENST00000559329 LILRB2Q8N423 598 aa13.15□□□□□ -0.3
USP8-208ENST00000559329 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.15□□□□□ -0.3
USP8-208ENST00000559329 SCGB1C1Q8TD33 95 aa13.15□□□□□ -0.3
USP8-208ENST00000559329 A0A1B0GV50 99 aa13.14□□□□□ -0.31
USP8-208ENST00000559329 SHISA9B4DS77 424 aa13.14□□□□□ -0.31
USP8-208ENST00000559329 IGHV3-7P01780 117 aa13.14□□□□□ -0.31
USP8-208ENST00000559329 OR9G9P0C7N8 305 aa13.14□□□□□ -0.31
USP8-208ENST00000559329 ATF4P18848 351 aaPredicted RBP13.14□□□□□ -0.31
USP8-208ENST00000559329 TLE4Q04727 773 aa13.14□□□□□ -0.31
USP8-208ENST00000559329 TMEM30BQ3MIR4 351 aa13.14□□□□□ -0.31
USP8-208ENST00000559329 SLC25A24Q6NUK1 477 aa13.14□□□□□ -0.31
USP8-208ENST00000559329 ZCCHC24Q8N2G6 241 aaKnown RBP13.14□□□□□ -0.31
USP8-208ENST00000559329 KDF1Q8NAX2 398 aaPredicted RBP13.14□□□□□ -0.31
USP8-208ENST00000559329 LEAP2Q969E1 77 aa13.14□□□□□ -0.31
USP8-208ENST00000559329 ZDHHC16Q969W1 377 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms